Puntigrus tetrazona (Sumatra barb): 122350106
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Entry
122350106 CDS
T08985
Symbol
rnf220b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220 isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122350106 (rnf220b)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122350106 (rnf220b)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122350106 (rnf220b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4
Pox_A_type_inc
Endonuclease_7
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
122350106
NCBI-ProteinID:
XP_043102258
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All DBs
Position
8:complement(9134496..9164096)
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AA seq
588 aa
AA seq
DB search
MDLHRTAFKMENSSYMPSPLTSPALMVLASTAEAGRDASVPCQPPRPFGVPVTLEKDMHL
PFPSGSYTFASMYHRQGGFPTRDFPTPLLHLHPQFAPPSLDCSPLGMLNHGAVGAFRPFS
SPPEERDAGAYQSAFLPAKRLKGCLEPEASPHLRYTDVEGKDFDFGGAHVPVGSPNTLKV
AEDAGKKLFGLSGLLVEGSSGLEEHKEPSKVKALYDTQTPMCPICHAVLRPGELQEHMEQ
EMERLMQLHNSQGSAQKECLAAGPPKSLFSMHIKREGSSSASSPRPADEAVHSDRYQTFL
RVRSNRQTRLNVKELCWCRCYAKQKMKSVHVWPDCGLPHVSSCPLSARIGKIKRRKAEED
QRDGVCVAEDGSVLSGGREFEWAEQRRIQMVSVLRGFRGLVSSTLKEHQDSDADLDVDGD
DTLEYGKAQYTEADVIPCSGNEPRDAEERQALRGAVLNGDTTSRLSPEQTKLANSETPTT
SSGEFDNNTSTTSPRTSKNSELEILPDDPSLGTLEALKTRIRDLEKQLTRGDRFKCLICM
DSYTVPLTSIQCWHVHCEECWLRTLGAKKLCPQCNTITSPGDLRRVYL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggacctccatcggactgcctttaagatggagaactcctcctacatgcccagcccgctg
acctcccctgccctcatggttttggcatcaacagctgaggctggccgagatgcctctgta
ccctgccagccccctcggccgtttggagtgccggtcactttggaaaaggacatgcacctt
ccgttccccagcggctcatacacctttgcctccatgtatcatcggcaaggagggtttccc
actcgagactttcccacccctctgctccaccttcacccacagtttgccccacccagtctc
gactgctcaccgctgggtatgctcaaccacggagcggtgggggccttccggccgttctcc
tctccacctgaggagcgagatgcaggggcttaccagtctgccttcctccctgccaagcgc
ttgaagggctgtctggaaccagaggcttcaccccacctccgctacacagatgtggaggga
aaagattttgactttgggggtgctcatgttcctgttggttcaccaaacaccctgaaggta
gctgaggatgctgggaagaagctctttggcttgtctgggctgttggtagagggttcatct
ggcctagaagagcataaagaaccaagtaaagtgaaggccctgtatgacactcagacaccc
atgtgtccgatctgtcatgctgtgctacggccaggagagctgcaggaacatatggagcag
gaaatggagcgtctaatgcaactgcacaatagtcagggttctgctcaaaaggagtgtctc
gctgctgggccgcctaagtctctgttctctatgcacataaagagagagggttcctcctcc
gcctcctctccacgtcccgccgatgaggctgtgcactccgacaggtaccagacatttttg
cgagtacgatcgaacaggcaaacaagactcaatgttaaggagctctgctggtgcaggtgc
tatgccaaacagaaaatgaaatctgttcatgtttggcctgactgtggactcccacatgta
tcttcttgcccactgtctgcgcgcattgggaaaattaaaagacggaaagcagaggaagac
cagagagacggcgtgtgtgttgctgaagatggctctgtgctgtcaggcgggagggagttt
gaatgggctgaacagagaagaatacagatggtttctgttctcagaggcttcagaggtttg
gtgagcagcacattgaaagaacatcaggacagcgatgcagatctggacgtggacggtgat
gatactttggaatatggaaaagcgcaatacacagaggcggatgtgattccctgttcagga
aatgaacccagagatgctgaggagaggcaggcgttaagaggagctgtgttaaatggtgac
acgaccagcaggttatctccagagcaaaccaagttggcaaactcagaaactcctactaca
agcagtggagagtttgacaacaatacaagcacaacatctccaagaacctctaagaacagc
gagttagagatcttaccagatgacccctccctcggtacgctggaggccctgaaaacacgc
atcagagatctggagaagcagctcacgcgaggagacagattcaagtgtctcatctgcatg
gactcttacacagtacctctgacctccatccagtgctggcatgtccactgtgaggaatgc
tggctccgcaccctgggagcaaagaaactgtgtccacagtgcaacactatcacctcacct
ggggacctcagacgagtgtatttgtga
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