Puntigrus tetrazona (Sumatra barb): 122350115
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Entry
122350115 CDS
T08985
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122350115 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
122350115 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
122350115 (pdlim2)
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Motif
Pfam:
PDZ
DUF4749
LIM
PDZ_6
DmmA-like_C
PDZ_2
Motif
Other DBs
NCBI-GeneID:
122350115
NCBI-ProteinID:
XP_043102290
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Position
8:complement(19838262..19889578)
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AA seq
365 aa
AA seq
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MMPFTVNLIGPSPWGFRISGGRDFKKAITVSKVNTGSKAETACLQPGDIIMEINGLNTGE
MLNVEAQNKIKSCTTQLQLLVERPAPPTPGQTNGITEQLVGRFQEAVQVSRDENQNYREY
TISSPASLSPGPYSPEPPSSPDRKGGRITPTSKSLQLHSWSSEERSVQSHRLSRPLSQEI
SSVDFRSNSVSSRTPTPPGRYSPHSPIEREMPISPRRSSDFAMQRFDRDSEVYKMIQENK
ESRAAPRQSNTFKMLQEVLEADEKEAAIRFPSKLSPSPSKPTSSVSGVQKYHTCEKCGTS
IVTQAVKITDDCYRHPECYTCTECGLNLKMRGHFWAEDKMFCEKHARERYQGPGSSYRYA
VSPNH
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgatgccatttacagtcaacctgattggcccgtccccctggggattcagaatttctgga
gggcgagacttcaagaaggccataacagtttccaaggtgaacactggcagtaaggcagag
acggcctgtctgcagcctggtgacatcatcatggagattaatggactcaatactggcgag
atgctcaacgttgaggcacaaaacaaaatcaagagctgcacgactcaactgcaacttctc
gtagaaaggcctgctcctcccactccgggtcagaccaatggaatcacagagcagctggtc
ggccgcttccaggaggcagtgcaggtgagtcgagatgagaaccagaactacagagagtac
accatctccagccctgcctctctgtctcctggcccgtactcacctgagccaccatccagc
cccgaccgcaaagggggcaggatcacacccaccagtaagagcctccagctccattcctgg
tcttcagaggagaggagtgtacagagtcacagactgtcccgacccctctctcaggagatc
tcttccgtggatttccgcagtaactccgtgtccagtcggactccgactccacctggacga
tactctccacacagccccatcgaacgagagatgcccatctcccctcggcgcagttcggac
tttgccatgcagaggtttgacagagactcagaggtctacaagatgattcaggagaacaaa
gagtcccgggcggctcctcgccagtccaacaccttcaagatgctgcaggaggtgctggag
gctgatgagaaagaagccgccatccgctttccaagcaagttgtctccgagcccctccaag
cccacatcctccgtttctggcgtgcagaaataccacacctgtgaaaaatgcggcaccagt
attgtcactcaggccgtgaagatcacagacgattgctaccgtcacccggagtgctacacc
tgcacagaatgcggcctcaacctaaagatgcgtggccacttctgggcggaggacaaaatg
ttctgcgagaaacatgccagagaaagataccagggtcccggcagcagctaccgctacgcc
gtgtccccaaaccactga
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