Puntigrus tetrazona (Sumatra barb): 122350242
Help
Entry
122350242 CDS
T08985
Symbol
grin2bb
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04020
Calcium signaling pathway
ptet04080
Neuroactive ligand-receptor interaction
ptet04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122350242 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122350242 (grin2bb)
04082 Neuroactive ligand signaling
122350242 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122350242 (grin2bb)
Ion channels [BR:
ptet04040
]
Ligand-gated channels
Glutamate (ionotropic)
122350242 (grin2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
122350242
NCBI-ProteinID:
XP_043102522
LinkDB
All DBs
Position
1:complement(22146210..22235522)
Genome browser
AA seq
1780 aa
AA seq
DB search
MGVGLAMFKGLYLHSSAMLVSLHISSSPFSDRRVLSFVSLASSSKPPLSLSLLLLSLFFF
PTCESRRGGGIGTPIGGMSGGERGQSIISPPHYPPPGVNPVGPPLPPKFAQGLSIAVILV
GNSSEVSLSEGLEKEDFLHVPLPPKVELVTMNETDPKSIINRICALMSRNWLQGVVFGDD
TDQEAIAQILDFISAQTHIPILGIRGGSSMIMAAKDDHSMFFQFGPSIEQQASVMLNIME
EYDWYIFSIVTTYYPGYQDFVNRIRSTIENSFVGWELEEVLLLDMSVDDGDSKIQNQMKK
LQSPVILLYCTKEEAMTIFEVAHSVGLTGYGYTWIVPSLVTGDADNVPSVFPTGLISVSY
DEWDYGLEARVRDAVAIIAMATSTMMLDRGPHTLLKSGCHGAPDKKGSKSGNPNEVLRYL
MNVTFEGRNLSFSEDGFQMHPKLVIILLNKERQYERVGKWENGSLAMKYHVWPRFELYSD
AEEREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLQNQTGDSGIYIKRCC
KGFCIDILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINE
ERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF
EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAF
FAVIFLASYTANLAAFMIQEEYVDQVTGLSDKKFQHPNDFSPPFRFGTVPNGSTERNIRN
NYKEMHSYMTSFHQKNVNEALHSLKMGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIF
ATTGYGIAIQKDSGWKRAVDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDVDN
MAGVFYMLGAAMALSLITFIAEHLFYWQLRFCFMGVCSGKPGITFSISRGIYSCIHGVQI
EENKSALNSPSATMNMNMNNTHSNILRLLRTAKNMTSVPGVNGSPRSALDYSHRESAVYD
ISEHRRSLVGHTDCKPPPYLPEDNMFSDYVSEVERTFGNLHLKDSNLYQDHYLHHHGGTG
SELALGMSGPLPNRPRSLGSASSLEGGYDCDSLGEGVAPIFTTQPRQSLTHRNREKFDLI
AGHPTQSSFKSGLPDLYGKFSFKGGASSSGFIAGHDRYCGGGGVGSGGDDGNIRSDVSDI
STHTVTYGNLEGHGKRRKQYRDSLKKRPASAKSRREQDEIELGFRRRPHHTIHHHHHHHH
PATQAHRSATPPVERKSLRGGNSTSYLFRDKENLRDFYVDQFRAKEGASPWEHLDLSDAP
GMGGGVGLGGGGCGGVVSSGGAGGACTSLVPMEDFLKGKSKKTECKGGMGGGSPGQQGHA
CWEKGIGGVXGLAGGDWECRNCHSGGVGSGGSKPVCMHGGGGAGSYPAAGGVGGTSGGSG
QISSRPSSATCKRCDSCKKPGNLYDISEDNHLLLDQTGVKHPLESGKGGGGTGAQTQVQR
RKFGPGGKVLRRQHSYDTFVELQKEGAGRMGGFGGSGGASMLPPPRSVSLKDKDRYMEGT
SPYAQMFEQYAGGERETSYFGDRGKGGGSSFSLFRGGEGGLHRRSVGERDMRDRDRGMMG
GGVGGTRGVGTYSLSKSLYPDKVNQNPFIPTFGDDQCLLHGAKSYYIKKQQAQPQQQQTP
QQQQQQQLLNNSRADFRGSMGVTSYLPASATSGVLSNVAPRFPKELCLGGPLGNHHGGGP
SNNKLLSARDGLGMGQGQRPFNGSSNGHVYEKLSSIESDV
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgggctggcaatgttcaagggactgtatcttcactcctccgccatgcttgtc
agcctccacatctcctcttcccctttctccgaccgtcgcgtcctgtctttcgtctccctg
gcttcttcttccaaaccgcccctctccctctcgctccttctcctctctcttttctttttc
cctacctgcgagtctcgccgtggaggcgggatcgggacgcccatcgggggcatgagcggc
ggcgagcgcggccaatcgataatcagccctcctcattatcctccaccaggagtcaatcct
gtgggtcctccgttgccaccaaagtttgctcaaggccttagcatcgcagtaatccttgtg
ggaaactccagcgaggtgtcactctctgaaggtctggagaaagaggacttccttcacgtg
cctctccctccgaaagtcgaactggtcacgatgaatgaaaccgaccccaagagtatcata
aaccgcatctgtgctctgatgtcgcggaactggctccagggtgtggtgtttggggacgat
accgatcaggaggccattgcccagatattggacttcatctcggctcagactcacatcccc
atcctgggcatccgtggaggctcttccatgatcatggcagccaaggatgaccactccatg
ttcttccagtttggtccctctatagagcagcaggcctctgtcatgcttaacataatggag
gaatatgactggtacatattctccatcgtcaccacatactaccctggataccaagacttt
gtcaatcggatccggagtaccatcgagaacagttttgttggctgggagctggaagaggtg
ctgctgttggacatgtcagtagacgatggcgattcaaagatccagaatcagatgaagaag
ctccaaagtcctgttatactactgtactgcactaaagaagaagccatgaccattttcgag
gtggcacattctgtcggcctcactggctacggctacacctggatcgtaccatctctggtg
acaggggatgcagataatgtacccagcgtctttccaacaggtttgatctctgtttcctac
gatgagtgggactatggactggaggctcgagtgcgtgatgctgtagccataatcgccatg
gcaacctccacaatgatgctggatcggggtcctcacacgctgcttaagtctggatgccac
ggcgcacctgacaagaaaggcagcaagtcaggaaaccccaacgaggtgctgaggtacctc
atgaatgtgacatttgaagggcgcaacctctccttcagtgaggacggttttcagatgcac
ccaaagttggttattatactgttaaataaggagaggcagtatgaaagggtcggtaaatgg
gagaacgggtctctggctatgaagtaccacgtgtggcctcggttcgagctctactcggat
gctgaggagcgggaggacgaccacctgtccattgttacgctagaggaggctccatttgtt
attgtggaggatgtcgaccccctcagtggcacctgcatgaggaatacagtgccgtgcaga
aaacagctcaaactccaaaatcagacaggagattcagggatatacattaaacgctgttgc
aagggcttctgtatagacatcctcaaaaagattgccaagtccgtaaagtttacctacgat
ctctacctggtgaccaatgggaagcatgggaaaaagatcaacggcacatggaacggcatg
gttggagaggtggtgttgaagaatgcccacatggcagtggggtccctgaccattaatgaa
gaaaggtcagaggtcattgacttctctgtgcccttcatagagactgggattagtgtcatg
gtctctcgtagcaatggcacagtgtcgccttctgcctttttagagcccttcagcgctgat
gtctgggtaatgatgttcgttatgctgttgatagtttcagccgtggctgttttcgttttt
gagtacttcagtcctgttggctataatcgctgcttggcagatggacgagagcccggcggt
ccctccttcaccatcggaaaagctatttggctactttggggtttggtcttcaataactct
gtgcccgtacagaaccccaaaggcactactagcaagatcatggtctcggtctgggccttc
ttcgctgtgatttttctggccagctacactgccaacctggccgcatttatgattcaagag
gaatatgtggaccaggtgacgggcctgagtgataaaaagtttcaacatccgaatgacttc
tcccctccattccgcttcggcactgtgcccaatggcagcacggagagaaatataaggaac
aactacaaagagatgcacagctatatgaccagcttccaccagaaaaacgtaaacgaggcc
ctccacagcctcaagatgggtaaattggacgccttcatctacgacgcagcagtcttgaac
tacatggccggacgtgatgagggctgtaaactggtgaccatcggcagtggttacatcttt
gctactacagggtatggcattgccattcagaaagattcaggctggaagagagcagtggat
ctcgccattctacagctctttggagatggtgagatggaggaactcgaggccctgtggctg
actggcatctgccacaatgagaaaaatgaggtgatgagcagtcagctggatgtagacaac
atggcaggtgtgttctacatgctgggagctgcaatggccctgtcccttatcactttcatc
gcagagcacctcttctactggcaactgcgattctgcttcatgggtgtgtgctcgggcaag
cctggcatcaccttctccattagcaggggcatctacagttgcatccatggtgttcagatt
gaagagaacaaatcagcccttaactcaccgtcagccactatgaacatgaacatgaacaac
actcactccaacattcttcgtttgttgcgtactgccaaaaacatgacctctgtgcctggg
gtcaatggttcacctcgcagcgcactggactacagccatcgtgagtcagccgtttatgac
atcagtgaacaccggcgcagcctagtaggccatacagactgcaagcctccaccatacctg
ccagaggacaacatgttcagcgactatgtaagcgaggtggagaggacttttgggaatttg
cacctgaaggatagcaacctgtaccaggatcattacctacaccaccatgggggcacggga
tccgaactggctctcggtatgtcgggtcccctgcctaaccgacctcgtagcttagggagt
gccagttcattggagggggggtacgattgtgacagtttaggggaaggggtagcgcccatc
ttcaccacccagccacggcagtcgctgacacatcggaacagggaaaagtttgacctgatt
gcgggtcacccaacccagtcaagcttcaagtccggcctgccggatctatacggaaagttc
tccttcaagggtggggcatccagttcagggtttattgcaggacacgacaggtactgcggg
ggtggtggggtgggttcaggaggggatgacggaaacattcgatctgacgtgtccgatatt
tccactcacaccgtgacctacgggaacctcgaggggcacggcaaacgacgcaaacagtac
agggacagcctaaaaaagagacccgcttctgccaagtctcgccgggagcaggatgagatt
gagcttggcttcaggagacgtccccatcacacaatccatcaccatcatcaccaccatcat
ccagcaacacaagcacaccgctcagccaccccacccgtggagcgcaagagcctgagaggt
ggtaacagcacctcatatctattcagagacaaagagaatttgagggacttctatgtggac
cagtttcgagccaaggaaggggcatccccatgggagcatttggatttaagtgatgctcca
ggaatgggtggaggagtgggactgggtggaggcggttgcggtggagtagttagtagcggt
ggtgctgggggagcgtgcactagtttggttcccatggaagatttcctgaaaggtaaatcc
aagaagacagaatgtaagggtggaatgggaggaggatcgcctgggcaacagggccatgca
tgctgggaaaagggcatcggaggggtgnnggggttggctggaggggattgggaatgtcga
aattgccacagtggaggggttggaagtggaggaagcaagccagtttgcatgcatggggga
ggcggggctgggagctatccagctgctgggggagttgggggaaccagtggagggagtgga
caaatctcaagccgccctagttcagccacctgcaagcggtgtgattcgtgcaagaaaccg
ggcaacttgtatgacatcagtgaggacaaccacctcctcttggatcaaactggggtcaag
caccctctggagagcggaaagggagggggaggcacaggggcccaaacccaggtacagagg
cggaaatttggcccaggtggtaaggttttgcgcaggcagcactcttatgacacatttgta
gagctgcagaaggagggggcaggcaggatgggtgggtttggaggcagtggcggagcatcg
atgcttcctccaccccgaagcgtgagcctaaaagacaaagaccgctacatggagggcacg
agcccctacgcccagatgtttgagcagtatgcgggaggggagcgggagacatcatatttt
ggggacagagggaagggtgggggttcatcatttagcttattccgtgggggtgaaggtggg
ttgcaccgtcgctccgttggtgagagagacatgagggacagggatagaggcatgatggga
ggaggtgtgggcggtacccgaggggtcgggacttactccttgtctaaatctctctaccca
gataaggtgaaccagaacccattcatcccaaccttcggcgacgaccagtgtctattacac
ggcgccaaatcatactacatcaaaaagcagcaggcacagccgcagcagcaacagacgcca
caacagcagcagcagcaacagctcctcaacaacagtcgggctgacttccggggctccatg
ggggtgacttcctatttgcctgcctccgcaacttctggggtgctgtccaatgtggcccct
cggttccccaaggagctatgtctgggcgggcctcttggcaaccaccacggtggaggacct
agcaacaacaagctgctgtcagcaagggatgggttaggaatgggtcaaggacagagaccg
tttaatggctcgagcaatggacatgtttacgagaagctttccagtatagagtctgatgtc
tga
DBGET
integrated database retrieval system
