Puntigrus tetrazona (Sumatra barb): 122350287
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Entry
122350287 CDS
T08985
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122350287 (hnf1a)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
122350287 (hnf1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
APP1_cat
HTH_5
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
122350287
NCBI-ProteinID:
XP_043102585
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Position
8:18098897..18106807
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AA seq
561 aa
AA seq
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MEGGEGRRAGERSGRLSALQEQLVWSLLGSGLSKELLIQAMGDLERERASAGAERTDRAD
GESSEEGDMDNPPPIFRDLERLPPEEAARQRAEVDQLLQEDPWHVAKMIKSYMQQHNLPQ
REVVESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYVKKKAEINQQFTNASRGVMSGEES
GEDVRKGRRNRFKWGPASQQILFQAYERQKNPSKEEREGLVEECNRAECLQRGVSPSQLA
GLGSNLVTEVRVYNWFANRRKEEAFRHKLALDVPYSSQSAPSTGQTLPSSPSPVLKYSQP
VVCESLGTVRSSSGEDRGGRLTSPVQLEPSHTLLDTHHHKSVSGGGSLPPVSTLTSLHGL
SGSSAAPPGLIMASLPSVMSLGDSSLLIGLTSSQPQTVPVINNVGGGFTTLQPISFQQQL
HASPQQPIAQQLQSHIGPSSFMATMAQLPCHMYSKADLSSYPSSSLLSQAMVIADSNSIG
TLTNLTAVRQILTSDPEGHSDTPIEEESLHLQSTSPEPVSSGSLELYPQTQTSETHPSHL
LSSSPGDIDPYIPTQMVSTAQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggagaggggagaagagcaggagaacgaagtggccggctgtcggccttacag
gagcagctggtgtggtctctactgggatcggggctgtcgaaagaactgctgatccaggcc
atgggagatctggagcgagagcgggcctcggccggcgcagagaggacggatcgggccgat
ggcgagagctcggaggagggagacatggacaatccacctcctatcttccgtgatctggag
aggcttccgccggaggaggctgcgaggcagagagctgaagtggaccagctgctgcaagag
gacccttggcatgtggcaaaaatgataaaaagctatatgcagcagcacaacttaccacag
agagaggtggtggagtccacaggcctcaaccaatcccatctctcccagcaccttaacaag
ggcacacccatgaagaatcaaaagcgagctgctctgtacagctggtacgtcaagaaaaag
gcagagatcaaccagcagttcaccaatgccagtcgaggcgtcatgtcgggagaggaatct
ggggaggatgtgagaaagggacggaggaatcgattcaaatggggcccggcgtcccaacaa
atcctgttccaggcctacgaaagacagaaaaaccccagtaaggaagagagggagggactg
gtggaggagtgcaacagagccgagtgtcttcagaggggagtttctccgtctcagctggct
ggactaggctctaatttagtcacagaggttcgtgtatacaactggttcgcaaatcgtcgt
aaagaggaggcatttcgccacaaactggcactggacgtgccatatagcagccaatcagct
ccctccacaggccagacgctaccatccagtccttcaccagttttgaagtacagccagccg
gtggtgtgcgagagtctgggcacagtaagaagctccagcggtgaagacagaggcggccgt
ctaactagtccggtccaacttgaacccagtcatacactcctggacacacaccatcacaaa
tcagtatctggtggtggttctttgcctcctgtcagtactctcacttccctgcatggactg
tcaggatcctctgctgcccctccgggactgatcatggcctccctaccaagcgtaatgagc
ctgggggattcctcccttctcataggcttgacgtcctctcaaccacagacggtccctgtc
atcaacaacgtagggggaggctttactacccttcagccaatctcttttcagcagcagctt
cacgcctcacctcagcagccaatagcgcagcagcttcagagtcacattggccctagctcc
ttcatggcaacaatggcacagttaccatgccacatgtacagcaaggcagacctgagctct
tacccgtcctccagtctcctgtcccaggctatggtcatcgcagacagcaacagcatcggg
acgctgactaacctcacagctgttcgacagattctcacctcagatccagagggtcattca
gacactccaattgaagaagagtctttacatctgcagtccacttcaccagagccagtgtct
tctggcagtttggagctctatcctcagacacagacgagtgaaacccatccttctcatctg
ctctcctcttcaccaggagatatagacccttacatccctacacagatggtctcaactgca
caatag
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