Puntigrus tetrazona (Sumatra barb): 122350317
Help
Entry
122350317 CDS
T08985
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122350317 (smarcad1a)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122350317 (smarcad1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
ERCC3_RAD25_C
CUE
HBS1_N
T2SSK
Motif
Other DBs
NCBI-GeneID:
122350317
NCBI-ProteinID:
XP_043102624
LinkDB
All DBs
Position
8:14162275..14169797
Genome browser
AA seq
969 aa
AA seq
DB search
MSFFDLDRFRFQRDNAADSHCKSSNGSSSDKENKRAHQRKTDGRCSSGKASRHALEDVSA
DDKVVRMGKDATSESKHQISKDMEDKIINLMEIFPQKSKKDLLEVVERTSTLEGAVAHCL
MIYGDDDSGRQKGKAGHSEDHNDQPKKRRKTMHSESEKDEEDDSDEEDESQEPSRERQES
LLKKLKRKLPDIEKEVLRDVLREHDWDYENALGSLLVFSSPDSSSPEDQRKQKSKSSHSR
GKTDKNSQKPNSSSRLSEWLMAAPSPVPKKPSVSTPKTQKSTVIKNTSFKRKRDSEFPLN
DISASEDEEEIDSDAESISDDLESEDEDSISGNLQEKIIQFLQESSLDELALISGCSIKK
AQKIISLRPFNTWKDVKEQFFKDNGLSIDLVHGCKVVLKERQVVRELMARCEKIAQKMTK
DVTQVIEAGMGSIKQPKVLSSNFKLQPYQLIGLKWLILLHQHNLSGILADEMGLGKTIQA
ISFLAHLYEKGIKGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRRYLRQDILS
GLVEFNIIVSTYNLTIGNDHDRSLFRKLRLKYAVFDEGHMLKNMNSLRYRHLMAINAEHR
LLLTGTPLQNNLLELMSLLNFIMPSMFSSSTSQISKMFSTRSSEEESSFHKERIAHARLI
MKPFILRRVKSEVLKQLPPKVENIEMCPMSDAQQKLYNRLFKRLKKAPNGEKRELCNVMM
QLRKMANHPLLHRQYYTTDKLAAMSKAMLKEPTHFDADPALIKEDMEVMSDFELHNLCKQ
YSSINSFQLEKKLLLDSGKFALLTKVLTRLKEKGDRVVLFSQFTMVLDIVEILLKHLDHQ
FVRLDGSTPMTERIGLIDKYNTNPEIFVFLLSTRAGGQGINLASANTVILHDIDCNPFND
KQAEDRCHRMGQTRTVQVIKLISRDSIEACMLRVGQEKLKLEQDMTAEGEEDGAMTEQMA
ELLKVSLGL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgagctttttcgacctagaccggttccgtttccagagagataacgcagcagacagtcac
tgtaaatcgtcgaatggatccagctcggataaggaaaacaaacgggcccaccaaagaaag
acagatggtcgatgttcatcagggaaggcgtcaagacatgcattagaggatgtctctgca
gatgacaaagttgtcaggatgggcaaggatgcaacatcagagtccaagcaccagataagc
aaagacatggaggacaaaatcattaatctaatggaaatattccctcagaagagcaagaaa
gatctactggaggtagttgaaagaaccagcacactggagggagctgtagcacactgtttg
atgatttatggagatgatgattcaggcagacagaaaggcaaagcagggcatagtgaagac
cataacgatcaaccaaagaagaggagaaaaactatgcattcagaatctgaaaaggatgag
gaagatgattctgatgaagaggacgagagccaggagccaagcagagagagacaggagtct
ctgttaaagaagctgaagaggaaactgcctgatattgaaaaagaggtgctgagggatgtc
ctgagagagcatgactgggactatgagaatgccctgggttcactgcttgtgttttcttca
ccagattcaagttcaccagaagatcagagaaaacaaaagtcaaaatcatctcactccagg
ggaaaaacagataagaactctcaaaagcctaacagctcgtctaggctgtcggaatggctg
atggcggcaccgtctcctgtgccaaaaaagcctagtgtgtctactccaaaaacacaaaag
tcaacagtcatcaaaaacacatcctttaaaaggaagagggacagtgagtttccgttaaat
gacattagtgcctctgaggatgaagaggaaattgacagtgatgctgagagtatctctgat
gatctggaatcggaggatgaagacagcatctcaggcaatctccaggaaaagatcattcag
tttcttcaagaatcctccctagatgagcttgctctaatttctggatgctcaatcaaaaaa
gcccagaagatcatttcgctgaggcctttcaacacttggaaagatgtgaaagagcagttc
ttcaaggataatggcctgtctatagatctggtacatggctgcaaggttgtgcttaaggag
cgacaggtggttagagagcttatggcaagatgtgagaagattgcacagaagatgactaaa
gatgttacgcaggtcatagaagcaggcatgggctccatcaagcagcccaaagtcctcagc
agcaatttcaaactgcagccatatcagctgattggtttgaagtggctgattcttctgcac
cagcacaacctgagtggcatcctggcagatgaaatggggctgggtaagactattcaggct
atctctttcctggctcatttgtatgaaaaaggaatcaaaggccctcatcttattaccgta
ccctcgtccacactggataattgggttcgcgagctgggtctttggtgtcccagtcttaaa
gttcttatttactatgggtctgtagaagaccgcagatatttgcgacaagatatcctcagt
ggcttagttgaattcaacatcatagtatccacttacaatcttacaatagggaacgaccat
gaccgcagtctgttccgcaagctgaggctgaagtatgctgtgtttgatgagggccacatg
ctgaaaaatatgaactctctacgctaccgccacctcatggccatcaatgctgagcacaga
ttgttgctgacaggaacacctttacagaacaacctgctggagctcatgtccctcctgaac
ttcatcatgccctccatgttctccagcagcacctcacagatctccaaaatgttttctacg
aggtcatcagaggaagaaagcagttttcacaaggaaagaattgcacatgccagacttatc
atgaagccattcattctgagacgagtcaagagtgaggtgttgaaacagcttccaccaaaa
gtggaaaacatagaaatgtgtcccatgagtgatgcccagcagaagctgtataacagactt
ttcaaaagactcaagaaggctccaaatggagagaagcgggagctttgcaatgtaatgatg
cagctgagaaagatggctaatcacccgttgctgcaccgtcagtactacaccactgacaaa
ttggctgccatgagtaaagcaatgcttaaggagccgacacattttgacgcggaccctgca
ctgatcaaggaggacatggaagtgatgtctgattttgagctgcataatttatgtaaacag
tacagctccatcaacagttttcagctggagaaaaagctcctcttagactctgggaagttt
gcacttttaaccaaagtactcaccaggctcaaagaaaagggtgatcgggttgtccttttc
agtcagtttaccatggtcctggacattgtggagattctgctcaaacacctggaccatcag
tttgttcgactggatggttctactcccatgacagagaggattggtctcatcgacaaatac
aatacaaaccctgaaatctttgtgttccttctgtcgacccgggctgggggacagggaatc
aacctcgcctctgcaaacacagtgatactgcacgacattgactgcaatccattcaatgat
aaacaggcagaggaccgctgtcatcgaatggggcaaaccaggacagtgcaggtgataaag
ctcatcagcagagactcgattgaagcctgcatgctccgtgtgggacaggagaagctcaaa
ctggaacaggacatgaccgctgaaggagaagaggacggtgctatgactgaacaaatggca
gagctgctcaaagtctcactgggtctttga
DBGET
integrated database retrieval system
