Puntigrus tetrazona (Sumatra barb): 122350349
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Entry
122350349 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4-like
KO
K16478
nephrocystin-4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptet03037
]
122350349
Cilium and associated proteins [BR:
ptet03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
122350349
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
122350349
NCBI-ProteinID:
XP_043102682
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Position
8:complement(10826429..10961990)
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AA seq
1427 aa
AA seq
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MSDWKSAFLRNRVIPPHSQTARQAPGSSQGLQLLFKQIDGLHLKQSESSPSLQYQLRVTL
FDSGHQHFLXRTWKSGSHSVSGVQGQSGRVLFNEVAYFHTSLCLSSVVAVVELVTLSTRA
DSSQDALGSGFGLLQLFTGRADTGISQGEGRLTLFSGTPRALFHPMLKDPLQLNAVLSVM
EGCQLLYSIQPHPALTPIMHLLPPNILVSGHDSVPGVLSSADTGTADVLRKPRLLKSFSC
VLEGLRVALFPSVEVFESDLLQLLNRDCQNTNRGAGGRSVVVQERRLLVGVHNGWGWVEK
PHVFVLEREAAGSGAARARAASAGSSFRQTSTDRLSDGLSLRGSVELKMMRDVAFSIVFQ
LQYVFSCPLAGDGQMTTTAVPRAAFMQCVRWCAWSLFSDPEGPGENVCLHLQGGALPNPW
GVMVYSASTQQTYSGKSVIKFKFSSSVEGASCSTALKVSHRETSPPKKLLSASQDERILE
PMVSTAESPRGPALPLSQLVATSRYPTMSHTVGSPWQQQLPSLLSPSPMASAHQLSHVER
PVAGSIAHLELSVQEREGNRSEEEDEMQELTFTPVHAPVITLGTHASGSSRSTSRRSLAR
LFSSGFPQILDSQNQVAEVLDPSEPVNFNPQREEADPLQANTLILQFLAFTRVPQAGVNS
DWPSTVHFSFQLYRFPPVTTERLKLLDPERNGKLKSSSDYPCVLSLINKDGTLNSGCPGL
QLQYRVDPQFLKSGERGWFLRYLALHSLQIDVWDSESLMLIGSAAVELKHMLRQGRAAVQ
VNHELEVITTEYLQDANFASRHDNKHSATPAINVYTTVKGILHLRLGNVGGSVTNSKSSL
ALPPSLSHVVQPSDAPQGFAGGGVPALAVLQLNASNARRARRLPEIDSELARLLQSTMRE
VGGAALHQQAEAKEVRQRKIDRMAAVRQHEEQKDPPPFQDGSNITRHRAERVQHSRDLRV
IEAYRERCKAQEITNMLSQAITTKHTLYATLGTAEFFEFMLKNPFNVPQTVTIECDDPEL
RVLVKTEEWRYFKELTKTLTPLEEEMFHLNESTQTPQVYLRPKESVHVPFKYQTFICGHT
FPIQDTKSLKTSRSPQMAQKHLSNTIHAKSIKVLFRGEDRKPLAICQVDVEPTPHVVDQT
FRFYQPELTFLKKAIRLPAAWDDTADGCATLHVRCSDPNVICHTTNLSPGEPQDIFLKVP
GSPSPQIRKFFITISTDPWLASPAQIWQVYVHYLQRMDLSCVCGTLSWHSLVLHGTQAIR
RVKCYTSHPLELQVDPGEVFALPAQGVQDVCVGLRALRPGSRFFYLNVVDVDTRQLVASW
LLCITCRQPIISKAFEISVPVDGGKGSNKKISFTNPYSSSRVFNLRTDRPDLLQFKEEQF
QIGGGELYTIGLRFAPSQNPGMEEILIFINDKQDKNEDTYCVRVQYR
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactggaaaagcgctttcttgaggaaccgcgtgatcccgcctcacagccaaaca
gccagacaagctccaggatcttctcaaggtcttcagctgctcttcaaacagatagatgga
cttcacctaaaacagtcagagtcatcgccatcactccagtatcagctgcgtgtgaccctg
tttgactcgggtcaccagcacttcttgnngcgcacatggaagagcggctcacactctgtc
agtggcgtacagggtcagagcggtcgagtgctcttcaatgaggttgcatacttccacact
tccttgtgtttgagttctgtggtggcagtggtggagttggttactctgtctaccagggca
gacagttcccaggatgcactggggtcggggtttggactgcttcagctcttcacaggtcgc
gcagacaccggcatctctcagggggagggcaggttgactctcttcagtgggacccctaga
gccctctttcacccgatgctgaaagaccctttacagttgaatgctgtattatcagtgatg
gagggctgtcagctgctttactccatacagccacacccagctctcactcccatcatgcac
ctgctcccgcccaacattttggtgtctggacatgacagcgtccccggtgtgctgtcatct
gcggacacaggcacagcagatgtgctgcggaagcctcgtctgttgaagagcttctcgtgt
gtgttggagggactacgtgtggcactcttcccctccgtggaggtcttcgaatctgacctg
ctccagctgctcaacagagactgccagaatacaaacaggggtgcggggggacgctcggtt
gtggtgcaggagcgcaggctgctggttggggtccacaacggctggggctgggtggagaag
cctcatgtgtttgtgctggaacgtgaggctgcaggaagcggagcggccagggctcgagca
gccagcgcaggaagcagcttcaggcagacctccacggacagactcagtgatggactgtct
cttcgtggcagtgtggagctcaagatgatgagggacgtagctttcagcattgtcttccag
ctccagtatgttttctcttgtccactggctggagatgggcagatgacaaccacagctgtg
cccagagcagcgtttatgcagtgtgtgcgttggtgtgcttggagtctgttttcggatcct
gagggtcccggagagaatgtgtgcctccacttgcagggcggtgctctccccaacccttgg
ggtgtcatggtctactctgcaagcacacagcagacatattcggggaaatctgtcatcaaa
ttcaagttttcatctagtgtggaaggagcttcttgcagcacggcattgaaagtgagccac
cgggaaacatcgccacctaagaagttactttcagcatctcaagacgaacggatcttggag
cctatggtttcaactgcagagtctccacgcggcccagcgctgcctctctctcagctggtt
gcgacttcacgctacccgaccatgagccacacggtagggtctccatggcaacaacagctc
ccctctctgctttctccctccccgatggcatcggcccaccagctgtcacatgtcgagcgt
ccagttgccggcagcatagctcatctggagctgagtgtgcaggagagagagggaaataga
agtgaggaagaggatgagatgcaggagctgaccttcactccagtgcacgcccctgtcatc
accctcggaacgcacgcttctggctcctccagatcgacctcccggagatctttggccagg
ctcttctcctctggttttcctcagatcctggacagtcaaaaccaggttgctgaggttctg
gatccctctgagcctgtgaactttaacccccagagagaagaagcagatcctctgcaggcc
aacactctcatccttcagttccttgcttttaccagggtccctcaagctggagtgaattca
gactggcccagcactgtccatttcagcttccagctttaccgcttcccccctgtcaccacc
gagcgtctgaagctgcttgacccagagaggaacggcaagctgaaatccagctctgattac
ccctgtgtcctctctcttatcaacaaggacggcacactcaactctggttgtccaggtctg
cagctgcagtaccgagttgacccacagttcctcaagtctggtgaacgaggctggttcttg
cgatacctggcgctccactccctgcagattgatgtctgggacagtgaatctttaatgctg
attggctcagctgctgtggagctaaagcatatgctgcgtcaaggccgcgccgccgtccag
gtgaaccatgagctggaagtgatcactactgagtacctgcaggatgccaactttgccagc
aggcatgacaacaagcacagcgccactccagccatcaatgtctacactaccgtaaaagga
attctgcatttgcggcttggcaacgttggtggcagtgtgacaaattccaagagctctttg
gctcttcctccatcgctctcccatgtggtccagcccagcgatgcccctcagggttttgca
ggaggaggtgtccctgctttagctgtcctccagcttaacgcaagcaatgccagacgagcc
cgcagattgccagaaattgacagcgagctggccagactgctacaaagcaccatgagggaa
gtaggcggagccgcactgcatcagcaggccgaagcaaaggaagtgcgccagaggaagatt
gacagaatggcagctgtccgtcagcacgaggagcagaaagacccgcccccttttcaggac
ggctcaaacatcacgaggcatcgggcagagcgtgtacagcactctcgcgaccttcgtgtg
attgaggcctatcgtgagcgctgtaaagcgcaggagatcaccaacatgctctctcaggcc
atcactaccaaacacactctctacgccacgcttggaacggcagagttctttgagttcatg
ctcaagaatcccttcaacgttcctcagactgtcaccattgaatgtgatgacccagagctc
cgtgtgctcgtgaaaactgaggaatggagatatttcaaggagttgacaaagactctgact
cctctagaggaggagatgtttcacctaaatgagagtacacagactccacaggtctacctg
cggcccaaagaaagcgttcatgtgcccttcaagtatcagaccttcatctgtggtcacacc
ttccctattcaggatacaaaaagcttaaagacttcaagaagtccacagatggctcagaaa
catctgtccaatacaattcatgccaaatccatcaaggtgctgttccgaggagaagacaga
aagcctctggcgatctgccaggtggatgttgaacccacgccacatgtggtggaccagacc
ttccgattctaccagcctgaactcaccttcctaaagaaggccattcgcctgcctgcagcc
tgggacgacacagcagatggttgtgccacccttcatgtgcgctgcagcgaccccaatgtc
atctgccacaccaccaacctgagtccaggagaaccacaggatattttcctgaaagtacct
ggcagcccaagtccacagattaggaaattcttcataaccatttccactgacccttggctg
gcctcccctgcgcagatctggcaggtatacgtgcattacctgcaaaggatggacttgagc
tgtgtgtgtggcactctgagctggcattcgctggttcttcacggcacacaagccattcgc
agggtcaagtgctacacgtcgcatcccctcgagcttcaggtggacccaggtgaggttttt
gctcttcctgctcagggagttcaggatgtctgcgtgggcctgagggctctgcgccctgga
agccgtttcttttacctcaatgtagtggacgtggacactcggcagctagttgcctcctgg
ctgctgtgcatcacatgccgacagcctatcatctccaaggcatttgaaatcagcgttcct
gtagatggagggaagggcagcaataagaaaatcagtttcacaaacccctactcgtcctcc
agagtattcaatctgcgcacagatcgcccagacctgcttcagtttaaagaggagcaattt
cagattgggggaggggagctctacaccatcggcttgcgctttgcgccgagtcagaaccct
ggcatggaagagattctcatctttatcaatgacaaacaggataagaacgaggacacttac
tgtgttagggttcagtacagataa
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