Puntigrus tetrazona (Sumatra barb): 122350379
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Entry
122350379 CDS
T08985
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
122350379 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122350379 (xpc)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
122350379 (xpc)
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Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
122350379
NCBI-ProteinID:
XP_043102728
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Position
8:12641209..12649215
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AA seq
910 aa
AA seq
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MFSSPAVEVHAFRCYERVNLSQSYPRSFSNSRMAKRKETQQKTDTKKPKQIAKSKPASKT
RKAKENSMVDKNNCKNSRVASRVPRKVRDERTSKYFQDSEVKTEEPEDMSDHSEEMSPVL
REHSSPSKQVKEDEEESEDEEDWEEVEEMAEALGPADSTELAVESKPVEIEIETPDMVRK
RQKKEKRKEEFETYLRRMMKRFNKELLVDTHKVHLLCLLASGLFRNRLCCESDLLAVALS
ILPAHFTTVATKRMNNGFLEGLLKWFQMTFTLNPALPEEKGVELRMVLENRIGCLSARDH
EEMTYLFLLVLRSLRLFCRLVLSLQPIPLKPPPVSKSKTTPTKSSPEKDQSEKPSPGAKI
SPGTKRPASAHNAAVKEERGGKRKKKKEEGGEKETVGGQKPKNSRRRSVASKVSYKEVSS
EEEEQSEEEFQPNNEEDSEDSDGAMKVCRKSKVKGKDRAPRSSDVKQEEESEEEEEEEEE
EEEEEEKQVKKQRRKRKEGKGTDEWLEVYLESTGKWLCVDVDQGVGQPQLCSDQATQPIT
YVVGVDDEGYLKDLSSRYDPTWLTSSRRRRVESEWWEETMELYKSTDTERGQKEDQEMQA
KLLDKPLPTSISEYKNHPLYALKRHLLKYEAIYPSTAAVLGYCRGEPVYSRDCVHTLHSR
DTWLKEARTVRLGEEPYKMVLGFSNRSRKARMMSEQKDVKDLALFGVWQTEEYQPPIAVD
GKVPRNEFGNVYMFKPCMLPVGCVHLHLPNLHRVARKLNIDCASAVTGFDYHCGFAHAVN
DGYIVCEEHQEILKAAWENEQDIQQKKEQEKREKRVVANWTLLVKGLLIKERLKRRYGQQ
GLASEPGLKQEKEGLSSDEEGEGGAQIAPPSLTSSWPQNRQEEQEEKIVRRVTKREKRGE
EKHLFPFEKV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctcccctgcagtcgaagtgcacgcttttcggtgttatgaaagagttaattta
tcccaaagctatccacgatctttcagcaacagcagaatggcaaagagaaaagagacacag
cagaaaaccgacacaaagaaaccgaagcagattgcaaagagcaaaccagcctccaaaacg
cgaaaagccaaagaaaatagtatggtggacaaaaacaactgcaagaactccagggtggca
tctcgtgtgcccagaaaggtcagagatgagagaacgagcaagtacttccaggacagtgaa
gtgaaaaccgaagaaccagaggacatgagtgaccacagtgaggagatgagccccgtgctc
agagaacactcatcaccatcgaaacaagtcaaagaggatgaggaagagagtgaggatgag
gaggactgggaggaagtggaagaaatggcagaagctctgggccctgcggactcgaccgaa
ctagcggttgagtcgaaacctgtggagattgagatcgagactccagacatggttcgcaag
aggcagaagaaggagaaaaggaaagaagagtttgagacttaccttcgtcgaatgatgaaa
cgatttaacaaggaactgctggtggatacccacaaggtccatcttctttgcttgttggcc
agtggtttgttccggaacagattgtgctgtgagtctgacctgttggctgttgctttgtca
atactgcctgcccactttaccacagttgccacaaaacgcatgaacaatggcttcctcgag
gggcttctcaaatggtttcaaatgacattcacattaaaccctgccttacctgaggagaag
ggagtggagttgaggatggtgctggaaaaccgaattggctgtttatcagcaagggaccat
gaggaaatgacctatctgttcttattggtgttgcggtcattacggctcttctgtcgattg
gttctgtcattgcaaccaattcctctgaaaccaccacctgtcagcaagagcaagaccaca
cctaccaagagctctccagaaaaagaccagtctgagaaaccctctccgggggccaagata
tctcctggaaccaaacgcccagcgtcagcccataacgctgcagtaaaagaggaaagaggt
ggaaagagaaagaaaaagaaagaggaaggaggagagaaagagacagtagggggacagaaa
cccaaaaacagcagaagaagaagtgtagcttcaaaagtgtcatacaaagaagtcagcagt
gaagaggaggagcagagtgaagaggagtttcaaccaaacaacgaggaagacagtgaagac
tctgatggggctatgaaagtatgcagaaagtcaaaagtgaagggaaaagatcgggctcct
cggtcgagcgatgtcaaacaggaagaagaaagtgaagaagaagaagaggaggaggaggag
gaggaggaggaggaagagaaacaggtgaagaaacaacgacgtaaaagaaaggaggggaaa
ggaacagatgagtggttggaggtttatttggaaagtacggggaagtggctgtgtgttgat
gtggatcaaggtgttggccagccgcagctctgctctgatcaggcgactcaaccaatcact
tacgtggtgggtgtcgatgacgaaggctacctgaaagaccttagcagcaggtatgacccc
acgtggctgacctcatcacggagacgccgggtcgaatcagaatggtgggaggagactatg
gagctctacaagtctacagatactgagagaggacagaaggaggatcaggagatgcaggca
aagttactggacaagccattgccaacatcaatctcagaatacaagaaccatccgctgtac
gcactaaagaggcacctgctaaaatacgaggccatctacccctctacagctgctgtcctt
gggtactgcagaggagagccagtttattcacgagactgcgtgcacacgcttcattctaga
gatacctggctgaaagaagcaagaaccgttagattaggagaagagccatacaagatggtg
cttggattttccaaccgttctcgtaaagccaggatgatgtcagagcagaaagacgtcaaa
gatctggctctttttggagtctggcaaactgaagaataccagcctccgatcgccgttgac
ggcaaagtgccgcgtaatgagtttgggaacgtgtacatgtttaagccatgcatgttacca
gtaggatgtgttcacctgcatttgccaaatctgcacagagttgctcgaaaactgaacata
gactgtgcttcagccgtgacgggttttgattaccattgtggatttgcacatgcagttaat
gatggctatattgtctgtgaagaacaccaagaaatcctgaaagcagcttgggaaaatgag
caagatatccagcaaaagaaagaacaagagaaacgtgagaagcgtgtggtggccaactgg
acactactggtgaaaggcctgctgataaaagagaggctgaagcgtcgctatgggcagcag
gggctggcatcggagccagggcttaagcaagaaaaagaaggactgtcctcagatgaggag
ggagagggcggggctcagatagctcctccctctctgaccagttcgtggccgcagaacagg
caagaggaacaagaggaaaagattgtaaggcgcgtaactaaacgagagaaacgtggagag
gagaaacatctctttccttttgaaaaagtttga
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