Puntigrus tetrazona (Sumatra barb): 122350415
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Entry
122350415 CDS
T08985
Symbol
ncor2
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor corepressor 2
KO
K06065
nuclear receptor co-repressor 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122350415 (ncor2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122350415 (ncor2)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
122350415 (ncor2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
PRP38_assoc
DnaT
Motif
Other DBs
NCBI-GeneID:
122350415
NCBI-ProteinID:
XP_043102790
LinkDB
All DBs
Position
8:17397266..17449136
Genome browser
AA seq
2398 aa
AA seq
DB search
MSSHPQSVPQGRRAMDARHLPSPATLPLQLRAHTDVGGLVDYHPHARDYGSHLPHGSLAQ
PHRRRPSLLSEFQPGSERGQEPHIRYEHIYLQDPSSQEVEYSEMKRPRLKSGRSLLLNHS
SHRQPLTVGGAEEMAKEHSSSSSSIGKIEPISPVSPVPMEPDLDLVPSRLSKEELIQNMD
RVDREITMVEQQICKLRKKQQQLEEEAAKPQEPERTISPPPSEAKHRSLVQIIYDENRKK
AEEAHRILEGLGPRVELPLYNQPSDTKQYHENIKINQAMRKKLILYFKRRNHARKQWEQK
FCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQNRVAQR
GGGLASAARSEHEVSEIIDGISEQENSEKQMRQLAVIPPMLFDAEQQRIKFINMNGLMDD
PMKVYKDRQVMNMWSEQEKDTFREKFIQHPKNFGLIASFLERKTVAECVLFYYLTKKNEN
YKNIVRRSYRRRGRSQNNQQAQQQVNRNNQEEKDDKEKEKEGDREEDKAEGEEKEDGMKD
DTSGEDGEEKEPPVTAKGRRTANSRGHRKGRVTRSMTNEQEENTSPLSSELANLEMNESS
RWTEEEMETAKKGLLQYGRNWSAIAKMVGSKTVSQCKNFYFNYKKRQKLDEILQQHKIKS
EKERKARRKGKAPQNEEASAPSAAEEEEMEGSGVSGNEEEAQEDGEGAANNSSDTESLPS
PRSSDDSKVKEEGSARPKTAPNATSSSSSTDKDMAATEMGSDEKPKVEKGEMEQGGVKQE
VKIEPGECGKEAAGEDRKPLSLEVDEAKKEIKKKEHGGKSGAQDSDSSATCSADEVEETE
SSDKNRPSLLSFAHDGVITSPVQKPLDLKQLKQRAAAIPPIMPEVSVAGRDRPGLLGKQQ
AMPHALALYQQQITMAHESSQEAKQQQPQPTKSQHNTGGGDSSSPRVRTRSPGVSDRERE
ELEGNERWLQALLHGLHKSRAFSPLADGKKIPGADDIRAVGLGRPVMSPYQLSPRDMAKL
SHEQLLHYNPSLPPTLQPQERMAAVRPLHIPEPPPLISSTKPGGSITQGTPVQLHNPSHG
SDHGKIPAPGSLALSWMDQRKIGGFPVVKQEQLSPRGAASSQSENLSSQDSVTSRGPMPA
VQGGSITKGIPGTRVHQEPSISYRGGSITQGTPADVLYKGTITRLITEDSPSRERSREDT
PSKGHVVYEGISGHILSFDRGPNSKEEGRGDMAGLKRTYDMMEVGISRVPPIRDSLSAAE
GLISRAMPHDRDSPHLHHMRXSISQGIPRDDCQRREVKQMKREGSPSPRGPGHPTDTLKS
RXHESMVTTVKXGGRSIHLIPPEGVVIGKPKEGSITQGTPLKQEPVGSSKRHDVRSIIAS
SPRPYSGLPSHLELRPEHRGSDRARYEEVGSKSRPSAVVSTPGSLSRTSPLALSGEQSRP
HHSPVGYEDHKRSGYPPPSHRASPLSGRESSQRAHEGSSKAQQQERKATPTPREVSSTKS
PLAVGEHTASLAYERILQGLGTEMFRGQIPLQFDPATLPXGIPIEPAYYLPHPPAPGPGY
PHPYPPYLIRGFPETAALENRQTLFNDYITSQQMHQWPAAAAMAAQRPDLLRGLTPREQS
LNLAYSPTPRGTSASPMDRITYIPGTSPAFPSGAYNTSPISPVGASHMSKIQGSSASSER
ERERERERERERDRERERERDRERERERDREREREREREREREKDRDRERDKSLSHGNVE
HAPIWRPGAPEQMGGGAAQQFSSPSHPYSHQSSHSPSPQDNMQQRPGVLHNTSSKSLPNS
EHNSPLCYGEPPGSARYQGFSGHLRSGLANEGYPSGTDSNAKDSNRDGGKSHGRGGLPKH
PDLSSSSKSDPKLASPGAGGSYPSPYSQAPGAHLGLPTSRGHPLHAPESNSSTSSMPPRG
GDGIAAGSVKXGKTQNKVMSIQEHELRALGKTTMTAANFINAIIMHQISCDAAMPETGAL
ATNGACDAHQKALEQLYGSEDRLSPGQQPPSAVKGSQRVVTLAQHISEVITKDYTRQSQQ
GQIGGQSSLQPVFGYHNSPVLDLTRPPSAPQAQTPTDPNARYTPEGASGERERGRDRSPP
QSKASPVSLAADGIEPVSPPGAVSEPETPGAAYPNEQAEQGMGSRSPASSSQPPAXFSKL
TESNSAIVKSKKEMIKKMVVGTEAEFNQGQPGTEIFNMPASTNAGPVSVRSHPAPEASGN
TIGLEAIIRKALMGKYDEQMDDRSPSNSVNSMSVGMPAVVGPPASVDGRSEDPYSLPVKS
KGGRSNGRKTKSPGPGLSGGERPSSVSSVHSEGDCNRHTPLTNRVWEDRPSSTGPTPFPC
NPLTMQMRLPSGMMSGPSPSPTQQGTSAPPQGQAQPRTWEEEPKPLLCSQYETLSDSE
NT seq
7197 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgcaccctcagtcagtgcctcagggtcggagggctatggacgctcgtcacctt
cctagtcctgccaccctacctctgcagctgagagcccatacggatgttggtggattggtt
gactaccatcctcatgctcgggactatggttcccatctgccccatggatccctggcccag
cctcaccgccgcagaccatcccttctgtctgaatttcaaccaggcagtgaaagaggtcaa
gagccccacatccgatatgaacacatttatctacaggaccccagcagccaagaagtggaa
tactctgagatgaagcgtcctcgcttgaaatcgggacggagtctcttattaaatcactca
tctcatcgtcagcccctcactgtgggtggagctgaggaaatggcaaaggagcacagcagt
agcagcagttccattggaaagattgaacccatctctcccgtgagcccagtgcccatggag
cccgacctggacctggttccctctcgcctctccaaagaggagctaatccagaacatggac
cgggtggatcgggagatcaccatggtggagcagcagatctgtaaactgcgtaaaaaacag
caacagctggaggaagaagctgcgaaaccccaagagccagagcgcaccatctcacctcca
cccagtgaagccaaacaccgcagccttgtccagatcatctatgatgaaaacaggaaaaag
gcagaggaggctcatcgcatcctggagggacttggacccagagtagagctgcctttgtat
aaccagccgtctgataccaagcagtaccatgagaacatcaagataaatcaggcaatgagg
aagaaactcattctgtatttcaaaagaagaaaccatgctcgtaaacagtgggaacagaaa
ttctgccagcgctacgaccagttaatggaggcctgggagaagaaagttgagcgcatagag
aataacccacgccgcagagccaaagagagcaaagtgcgggagtattacgaaaaacagttt
cctgagatccgcaaacagagggagctgcaagagcgcatgcagaacagagtggctcagcgt
ggtgggggtttggcctcagcagcccgcagcgaacatgaggtttctgagatcatcgatggc
atctcggagcaagagaactcagagaagcagatgcgtcagttagctgtgattcctcccatg
ctgtttgatgccgagcagcagaggataaagttcatcaacatgaacgggctgatggacgat
cccatgaaggtctacaaagacagacaggtcatgaacatgtggagcgagcaggagaaggac
actttccgtgagaagtttatccagcacccaaaaaactttggcctgatagcctcctttttg
gagagaaagacggtggctgagtgtgtcctgttctactacttgactaagaagaatgagaac
tacaagaacattgttcgcaggagctaccgtcgccgaggcaggagccagaataaccaacag
gcacagcaacaggtgaaccgcaacaatcaggaagagaaagacgacaaggagaaagagaag
gagggagaccgtgaggaggacaaagcagagggagaagagaaagaggatggcatgaaagat
gacacctctggtgaagatggggaggagaaagaacctcctgtaactgctaaaggccggcgt
accgcaaacagccgcggtcaccggaaaggacgagtcactcgctctatgaccaatgagcag
gaagagaacacttcaccgctaagcagtgagctggcaaatcttgagatgaatgagagttct
cgctggactgaagaggagatggagactgcaaagaaaggtctgctccagtatggcagaaat
tggtctgctatcgccaagatggtgggctccaaaactgtctcccaatgcaagaacttctac
tttaactacaagaagagacagaaactggatgagattctgcaacagcataaaataaaatcg
gagaaagagcgtaaggccagacgtaaaggtaaagctcctcagaacgaagaggccagcgct
ccatcagctgcagaggaagaggagatggagggatcgggagtcagcggcaatgaggaggag
gctcaggaggacggagagggtgcagccaataacagctcagacaccgagagccttccttcc
ccacgctcctcagatgacagcaaggtcaaagaagagggctcggcaaggcccaaaactgca
cccaatgccacttcctcctcgtcctcaacggacaaggacatggcagctacagaaatgggg
tcggatgaaaagccaaaagtggagaaaggagaaatggaacagggaggagtgaagcaggag
gtaaaaatcgaaccaggggagtgtggtaaggaggcagcaggagaagataggaaacctctt
tccctggaggtggatgaggccaagaaagagatcaaaaagaaagagcatggaggaaagagc
ggagctcaagacagcgactccagcgccacttgcagcgctgatgaggtggaggagacggaa
agctcagacaagaacaggccgagtttgttgagtttcgcccatgatggagtgatcacttct
ccagttcagaaaccactggacctcaaacagctcaagcaaagagcagccgctatacctccc
ataatgccagaggtgtcggtagcaggacgcgaccgacctgggttgctggggaagcagcaa
gctatgccccacgctcttgcattgtaccagcagcagattaccatggcacatgaatcttcc
caggaggccaaacagcaacaaccacagccaaccaaatctcaacataacacagggggcgga
gactcaagcagcccacgagtcaggactcgcagccctggtgtctctgacagagagagagaa
gagctggaggggaacgagagatggcttcaggctctgctacatggattacataaatctcgg
gcattctctccccttgcggatggtaaaaagattcctggggctgatgacattcgggctgta
ggtctaggccggccagtgatgtctccgtaccagctctctcccagagacatggccaaactc
agccacgaacagctgctacactacaatccctcattgcctcccactcttcagccgcaggag
agaatggctgcagtgcggcctctccatatcccagaaccccctcctctcatctcctcaacc
aaacctggcggttccatcacgcagggtaccccggtgcaattgcacaacccttctcatggc
tcagatcatgggaaaatcccagcaccaggatccctggctctctcctggatggaccagagg
aaaatcggagggtttccagtggttaaacaggagcagttgtctccacgcggggctgcctct
tcccagagtgagaatctctcttcacaggacagcgttacgtcacggggccccatgccagct
gttcagggtggcagcatcacgaagggcatccctggtacacgtgtgcatcaagaaccttcc
atatcatatcgagggggttcaatcactcagggcactcctgcagatgtcttgtataagggc
acaataacccgtctgatcactgaggacagccccagcagggagagaagcagagaagacact
ccttctaaggggcatgtggtctatgagggcatcagtgggcacatcctttcctttgaccgg
ggtccaaattctaaggaagagggtcgtggagacatggctgggctgaaaaggacctatgac
atgatggaggttggcatttctcgtgtgccacccattagagactcactatcagccgctgaa
ggcttgatcagtcgagcaatgcctcacgatcgtgatagtcctcatctacatcacatgcgt
ngatccatatcccaaggaattcctcgggacgactgtcagcgtcgggaggttaaacagatg
aaaagggagggttccccatcacctcgtggccctggtcatcccactgacacgcttaaatca
cgcnctcatgagagtatggtgaccaccgtcaaangaggaggacgctccatccacctgatc
cctcctgaaggggttgtgataggcaagcctaaagagggctcaatcacccagggcacccct
ctgaaacaagagcctgttggctcatccaagcgccatgatgtgcggtccatcatcgccagc
tctcctcggccttactctggactgccctctcatctagagctgaggcccgagcacagaggg
tctgacagggcccgctatgaggaagtagggagcaaatcacgacccagcgctgtggtcagc
acccctggctctctgtcccgtacttctcccttggcacttagtggagagcagagcagaccc
caccacagtccagtgggctatgaagatcacaaaagatctggctaccctccgccttcacac
agagcctctccactatccggcagggaatcctcacagcgtgcacatgaaggttctagtaag
gcccagcagcaggagagaaaagccactcccacccctcgagaggtgagctccactaagtct
ccactggcggttggtgagcacactgcgtctttggcctatgagaggatcctgcaggggctg
ggaacagagatgttccgtggccagataccactacaatttgatcctgcaactctgcccnag
ggaatcccaattgagccagcatattacctgccccatccacctgcccctggccctggctac
cctcatccctacccaccctacctgatcagaggtttccctgaaacagcagccctggagaac
agacagacactcttcaatgactacattacctcccagcagatgcaccaatggccagctgct
gccgccatggctgctcagagacccgacctgctcagaggcctaacgcctcgagagcagtct
cttaacttagcctactcacctacaccaagaggaacatctgcatctcccatggatcgtatc
acatacatcccaggaacctctccagctttccccagcggagcctacaacacatctcccatc
tcaccagtaggagcctctcacatgagcaaaatccaaggcagttcggcatcctcagagaga
gaaagagaacgggagagagagagggaaagagagcgggatcgtgagcgagagcgggagcgg
gaccgagagagggagagggaacgagacagagagagagagcgtgagcgagaacgggaacgt
gagcgtgagaaagacagggacagagaaagagacaagtccctcagtcatggtaacgtggaa
catgcccctatatggagaccaggagcaccagaacagatgggcggtggcgcagcacagcag
ttctcgtccccgtctcatccctatagtcaccagtcatctcactctccctcgccccaggac
aacatgcagcagagacctggcgttctgcacaacaccagctcaaagagcctgcccaattct
gagcacaacagtcctctgtgctacggtgagccaccaggatctgctcgctaccagggcttt
agtgggcaccttcggtctggtctagccaatgagggttacccatccggtacagactcaaat
gcaaaagattccaacagagatgggggcaaaagccatgggcgtggaggtctgcccaaacat
ccggatctttcatcctcttccaagtctgaccccaagttggccagccccggtgccggtggg
tcatacccttctccgtacagccaggcccctggtgcccacctcggtctgcccacaagtcga
gggcaccctttgcatgctcctgaaagcaacagcagcaccagttctatgccgcctcgcggt
ggggatggcatcgcagcgggcagcgtcaagtagggaaagactcaaaacaaagtgatgtcc
atacaggaacacgaacttcgagcactcggtaagaccaccatgacagcggccaacttcata
aacgcgataatcatgcatcaaatttcttgtgatgcggcgatgccagagactggtgcgctc
gcgaccaacggcgcctgtgatgctcaccaaaaggcactagaacagctgtacgggtctgag
gacagactttctccaggtcagcagccaccttcagccgtcaaaggctctcagagagtggtc
acccttgcccagcacatcagtgaggtgatcactaaagactacacccggcagtcacagcaa
ggccagatagggggtcaatcatctctgcagcctgtgttcgggtatcacaactcccctgtg
ctggatctcactcgtccccccagtgctccccaagcccagacccccacggaccccaacgcc
cgctacaccccggaaggtgcttctggtgagagggagagaggtagagacagatctcctcct
cagagtaaggcctctccagtgagtctggctgctgacgggattgaacctgtttcaccacca
ggggccgtttcagagccggagacaccaggagcagcctacccgaatgaacaagcagagcag
ggtatgggatctcgttcaccggccagtagctctcaaccaccagccnttttcagtaaactg
actgagagcaactctgctattgtcaagagcaagaaggaaatgattaagaagatggtagtc
ggcacagaggctgaattcaaccagggccaacctgggacagaaatctttaacatgcctgcc
tctacaaatgcaggacccgtgagtgtgcgtagtcacccggcaccagaggccagtggtaat
actataggtctggaggccatcatcaggaaagccctcatgggcaagtatgatgaacagatg
gatgatcgctcaccgtccaactctgtcaactcgatgagtgttggcatgccagctgttgtc
gggccaccagcttcagtggatgggcgctctgaggacccctactccctgccagttaaatcc
aaaggaggccgctctaatggtcgcaagactaagtctcctggtcctggtctgtctggagga
gaaagaccttcatctgtgtcctctgtccactctgagggagactgtaaccggcacacgcca
ctcaccaacagagtgtgggaggacaggccctcgtctacaggacccactccattcccctgt
aaccccctgaccatgcaaatgcgtctccccagcgggatgatgtcaggaccctctccttcc
ccaacgcagcagggcacttcagcgcctccacagggccaggctcaaccccgcacctgggag
gaagaacccaaacctttgctgtgctctcaatacgagaccctgtcagacagcgagtga
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integrated database retrieval system
