Puntigrus tetrazona (Sumatra barb): 122350482
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Entry
122350482 CDS
T08985
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b isoform X1
KO
K14966
host cell factor 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03083
Polycomb repressive complex
ptet04980
Cobalamin transport and metabolism
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122350482 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
122350482 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122350482 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptet01009
]
122350482 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122350482 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
ptet03029
]
122350482 (hcfc1b)
Protein phosphatases and associated proteins [BR:
ptet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122350482 (hcfc1b)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
122350482 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
122350482 (hcfc1b)
MLL-HCF complex
122350482 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
122350482 (hcfc1b)
Mitochondrial biogenesis [BR:
ptet03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
122350482 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
122350482
NCBI-ProteinID:
XP_043102935
LinkDB
All DBs
Position
8:complement(3880287..3898517)
Genome browser
AA seq
2038 aa
AA seq
DB search
MASSGTSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTAT
NQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKPK
APKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRPGSNVAG
WDIPITYGVLPPPRESHTAVVYTEKTSKKSRLVIYGGMSGCRLGDLWTLDIDTLTWNKPA
ISGGAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMSW
ETILMDTLEDNIPRARAGHCSVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYLETDRPQP
PSRVQLVRANTNSLEVSWGAVPTADTYLLQLQKYDIPAATAATSPTVNPTPSLPINSPKS
PAPAAAAPAAQSLPLTGVTMVPQVPSPTTAMPSSPLAASPRGPAILKVAAPHSTPGTSVV
TVRQATPGGKSPVTVTSLPAGVRMVVPAQSTQGTPIGSSPQMSGMAALAAAAAATQKIPP
SSTTTVLNVPAGATIVKTVAVTPGSTTLPATVKVASPVMVTNPATRMLKTAAAQVGTSAI
STPNTPTRPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPITMGGSGPLISSLGK
MMSVVQTKPVQTSAVTGQAGSSPVTLIQTKTPLPAGTILKLVTSADGKPTTIITTTQAGG
AGTKPTILGISTVSPTAANKPGTTIIKTIPMSAIQQGAAGLTTSSGVKSPITIITTKVVT
PGTGTPGKIITAVPKLTGAGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVSPGSVSAGK
PTVTTLVVKGTTGVTTLGTVSGTVSTSMAGANVVSANASLVTPVTTLASIATLSNQVISP
TAITVSAAQTNLATATIQSAAQPTQVTLITTPSGAEAQPAQDLPVSILASPTSEQPSTTG
ADAGDGAGDGTTTVTLVCSNPPCETHETGTTNTATTASAKMGTEQICSNPPCETHVTGTT
NTATTASANMGRTQQVCTNPPSETHDTGTTNTATTASCNMGSKEMGTVNSKTAASSSATS
SASGSEPATPVSESSGGSGPMRPENLRTGTTNTSTTARSNMGSDQTGTVQSSNKSQAAIS
STLMPVSANSPGETNETGSANASPVSGDVQQVCSNPPCETHETGTTDTATQSSSNTSSGQ
TNVVQRVCSNPPCETHETVTTNTPTQASSSIGVGQNAAVQQVCSNPPCETHETGTTNTPT
QASSSIGAGQNATVQRVCSNPPCETHETGTTNTPTQALSSIGAGQNATVQRVCSNPPCET
HETGTTNTPTQASSSIGAGQNAAVQQVCSNPPCETHETGTTNTPTQASSSIGAGQNATVQ
RVCSNPPCETHETGTTNTPTQALSSIGAGQNGAVQRVCSNPPCETHETGTTNTATTATSS
LETGEGAAQQAGDGQSDSGTSSEPSSSTEPANPTTQSRAITTVTQATPTPGPSVPEISSM
AGSAVVAEVPGEAEAMEQTSAEAVAVGEEPMQSECQGELGEEAAVRVVAIDESAEGEEGA
MLQVHVAMEAQPGQGDQAEQMEAGVEGAEAMSLAAQDSEALALPQELMSAEGQQTTLMVT
GLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVLSEADAGHDGQPTTTIPIV
LTQQELAALVQQQQQLQEAQAAAAQQLSAEAAAAALPTEGLAPADSLNDPASESNGHEMT
TAVVGAVARLLPRTSTETLAPSSTFAPSQPMVVASPAKMQAAAALAEVANGIESVAGKQE
APPPVVKPPVKKENQWFDVGIVKVTNMVVTHYYVPADDSALTDDDSGTIPDYSRMKKIEL
SPGTAYKFRVAGINTCGRGTFSEVSAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVT
SGKIIEYSVYLAIQSSQTVEAKASAPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKP
AIIFRIAARNEKGYGPATQVRWLQETSKDGSAAKPAAKRPVSSPDMKGAGPKKARSDQ
NT seq
6117 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcggggacctcggttctgcagccgcgctggaagagggttctgggctggtct
ggcccggttcctcgcccgagacacggacaccgagctgtggccattaaagagctgatggtg
gtgttcggcggagggaatgaaggcattgtagacgagctgcacgtctataatacagccacc
aatcagtggtttattcctgctgtccggggtgacattcctcccggctgtgccgcatatgga
tttgtgtgcgacggcactagactccttgtgtttgggggcatggttgagtacggaaagtat
agcaatgatctttacgaactacaggccagtagatgggagtggaaacgtttgaagcccaaa
gcccccaagaatggcccaccaccatgtcctcgcctgggccacagcttttccctggttgga
aacaaatgctatttgtttggtggactggcaaatgacagcgaagatcccaaaaacaatatt
cccagatacctgaacgacctctacacactcgagctacgcccggggtctaacgtagcgggc
tgggacatccccattacatacggtgtgcttcctcctcctcgtgagagccacactgctgtt
gtctacacagagaaaacgtccaaaaagtctcgtcttgtcatctatggcggcatgagtggt
tgccgtcttggagacctctggactttagacatagatactttaacttggaataaacctgcc
ataagtggtggggcccctttgccccgcagtctccactctgcaaccactataaccaacaag
atgtttgtgtttggtggatgggttcctctggtcatggatgatgtcaaagtagccacacac
gagaaggaatggaagtgcactaacacactggcctgcttaaatctagactcaatgtcttgg
gaaaccatcttgatggacacgcttgaagataatatcccaagagccagagccggacactgc
tctgtggctataaacaacaggctttacgtctggagtggaagagatggctaccgcaaagcc
tggaacaaccaagtttgctgcaaagatctgtggtatttggaaacggatcgccctcagcct
ccgtcacgtgtgcagctggtccgtgccaacaccaactctctggaggtgagctggggggca
gtgcctaccgctgacacttacctgctgcagctgcagaaatatgacatccctgctgcaaca
gctgccacatcgccaacggtcaacccaaccccgtctttacccatcaactcgcctaagagt
ccggcacccgccgctgctgctcctgcagctcagagtctgcccctcactggggtcacaatg
gtgccacaagttccttcgcccaccaccgccatgccaagcagcccgcttgcagcctcacct
cgtggaccagctattctcaaagtggcagcgcctcattccacccctgggacgtcagtcgtt
actgtacgtcaggctactccaggagggaaatccccagtcacggttacatcacttcctgca
ggtgtccgcatggttgttcctgcacagagcacccaggggacgccaatcggcagcagtcct
cagatgagtggcatggctgcattggctgcagccgcagctgccacacagaagatcccgccc
tcttccacgaccactgtgctaaatgtcccagccggagccaccattgtaaaaacggtcgct
gtgactcctggatccacaactttaccagctactgtcaaagtagcttcacctgtaatggtt
actaatcctgcaacccgaatgctgaaaacggctgcagctcaggtcggcacttctgccatc
tctactcctaacactccgactcggcccatcatcacagtgcacaaatcaggcacagtaacc
gtagcccagcaggctcaggtcgtcactaccatggttggaggagtcactaaaactataacc
ctcgttaagagccccattacaatgggtggcagtggtcctctgatctccagccttgggaaa
atgatgtctgttgtccagaccaaaccagtacaaacctctgcggtcaccgggcaggctgga
agcagtcctgttactcttatacaaacaaagactcctctgcctgctggtaccatcctgaaa
ctggtcacatctgccgatggcaagcccaccacaatcataacaacaacacaggcaggaggg
gctggcaccaaacccactatcctgggcatcagcaccgtctctccaactgccgccaacaaa
cccggaaccaccattattaaaaccattcccatgtctgcaatccaacaaggagcggcaggt
ctgactaccagctctggtgtcaagtcccccatcacaattatcacaactaaggttgttact
cctggcacgggtactccagggaaaatcataaccgctgtgccaaaactgactggtgcggga
caacagggggtcacacaggtggtgctgaagggggcaccagggcagcccggcactatcctg
cgcactgtgcctatgggtggtgtgcgtctggtttcaccaggcagcgtttctgctggaaaa
ccaactgttaccacactggtggtcaagggcaccacgggagtcacaactctgggtacagta
agtggcactgtgtcgactagcatggcaggagccaatgtggtaagcgctaatgccagccta
gtgactccagtcaccacacttgcctctatagccacattgtccaaccaggttatcagtccc
accgccattactgtatctgctgcccagaccaaccttgccactgctacaatacaatcggca
gcccagcctactcaagtaaccctcatcacgactccaagtggtgctgaggcccaacctgca
caggatcttcctgtctccatcctagcctctcccacttcagagcaaccctccaccactggt
gctgatgctggtgacggcgctggcgatggtactaccactgtgacactggtctgctccaac
cctccttgtgagacccacgagacaggaacgaccaacacggcgacaacggcttctgctaaa
atgggcaccgaacagatttgttccaaccctccttgtgagacgcacgtgacgggcaccacc
aacacagccaccacggcctctgcgaacatgggcagaacacagcaggtgtgcaccaaccca
ccctcagagacccacgacacaggcaccaccaacacagccaccactgccagctgcaacatg
ggatctaaagagatgggaactgtgaacagcaagacggcagcgtcttcgtcagctacgtct
tcagcttctggttcggagccagcaacacccgtctcggagagcagtggtggatcgggcccc
atgcggccggagaacctccgcacagggaccaccaacacctctactaccgcccgctccaac
atgggctcagaccagacgggaacggtgcagagctccaacaagagccaggcagccatctcc
tctacgctgatgcctgtttccgccaactctcccggcgaaacgaatgagacgggctccgca
aatgcttcacctgtgtctggtgatgtccaacaggtctgctcaaatcctccctgtgagaca
cacgagacaggcacgaccgacacggctactcagtcaagctctaatacgagcagtggacaa
accaatgttgtacagagggtgtgttccaatcccccatgtgaaactcatgagacggttacc
accaacacaccgacccaggcctcatctagtattggtgttggacagaatgccgctgtgcag
caggtgtgctccaatccgccctgtgaaacccatgaaacgggcactacaaacacaccgacc
caagcctcgtcttctatcggtgctggacagaacgccactgtgcagcgggtgtgttccaat
ccaccctgtgaaacccatgaaacgggcactacaaacacacctactcaggccttgtcttct
atcggtgctggacagaacgccactgtgcagcgggtgtgttccaatccaccctgtgaaacc
catgaaacgggcactacaaacacaccgacccaagcctcgtcttctattggtgctggacag
aatgccgctgtgcagcaggtgtgctccaatccgccctgtgaaacccatgaaacgggcact
acaaacacaccgacccaagcctcgtcttctatcggtgctggacagaacgccactgtgcag
cgggtgtgttccaatccaccctgtgaaacccatgaaacgggcactacaaacacacctact
caggccttgtcttctatcggtgctggacagaatggtgctgtgcagcgggtgtgctccaat
ccaccctgtgaaacccatgagaccggcaccaccaacacagccacaacagcaacaagcagc
ttagaaactggagaaggagcagcccagcaggccggtgatggacagagtgacagcggcacc
agctcagaaccctcatcatctacagaaccagccaatcccacgacgcaaagcagagccatc
acaacagtaacacaggccacgcccactccaggaccatctgtaccggagatctcatccatg
gctggatctgcggtagtggctgaggtcccaggagaggccgaggccatggagcagaccagc
gctgaggccgtggcggtgggagaagagcccatgcagtccgagtgtcagggagagctgggt
gaagaggcagccgtcagggtcgttgccatcgatgaaagtgcagagggtgaggagggcgcc
atgctacaggttcatgtcgccatggaagcacagccaggacaaggagatcaggcagagcaa
atggaggctggtgtggagggcgcagaagcaatgagtctcgctgctcaagactcagaagcc
cttgctctgcctcaggagctgatgtctgcagaaggacagcaaaccaccctcatggtgacc
ggactgaccccagaggagctggcagtgacggcagcggctgaggctgcagcacaggctgca
gctacagaagaagctcaggccctcgccatccaggctgtcttacaggcggctcagcaggcg
gtgctcagcgaggcagacgcaggccacgacgggcagccaaccaccaccatccctatagtt
ttgactcagcaggagctcgccgctctggttcagcagcagcagcagctccaggaggcgcag
gcagccgcagcccagcagttaagcgctgaagcagccgcagcggcactgcccactgaaggc
ttggcaccagcagacagtctcaatgacccagcgtctgagagcaacggccacgaaatgaca
actgctgttgtgggagctgtggcccgtctccttccacgtacgtctacagagactctagcc
ccatcaagtacttttgcaccatctcagccgatggtcgttgccagtccagcaaagatgcaa
gcggcagctgctttagctgaggtggccaatgggattgaatcagtagctgggaagcaagaa
gctcctccacctgttgtaaagccaccggtgaagaaagagaatcagtggtttgatgtcgga
atcgttaaggtcacaaacatggttgtcacacactattatgtgccagcagatgattctgcg
ctcactgatgatgattctggcacaatcccagactacagccgaatgaaaaagattgagctt
tctccgggcactgcatacaagttccgtgtggccgggattaacacgtgtggccgtgggacg
ttctcagaggtctctgcatttaagacatgcttgcctggcttccctggagcaccgtgtgcc
atcaaaatcagcaagagtcctgatggtgcccacctaacctgggagcctccttcagtgacg
tcagggaagatcatcgagtattcggtgtatctggcaatccaaagctcacaaacagttgag
gctaaagcgtccgctccggctcagcttgcctttatgcgggtgtactgcgggcccaacccg
tcctgcctagtgcagtcgtctagcctctccaatgcccacatcgactacaccaccaaaccc
gccatcatcttccgcatcgctgcacgcaacgagaaggggtacggccctgcaacgcaagtc
aggtggctacaagaaaccagtaaagatggctctgcggccaaacctgcagcaaagaggccg
gtctcgtcacctgatatgaaaggcgccggtccaaagaaggccagatctgaccagtga
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integrated database retrieval system
