Puntigrus tetrazona (Sumatra barb): 122350548
Help
Entry
122350548 CDS
T08985
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122350548 (zc3h13)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
122350548 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
122350548
NCBI-ProteinID:
XP_043103069
LinkDB
All DBs
Position
1:16079410..16092907
Genome browser
AA seq
1788 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSSSTTTPSRRPSVFERLGPSTASNAAETHCRNWLKTGNCSY
GNTCRYTHGTPSRGKGFSGTFNRSAERPTGDLRERMKNKRQDVDADTQKRDTDEPTSPTT
RQRDSSRGRHREKEDIKITKERTPASEEETADWEATREDSDNGDYDHELSLEMKRQKIQR
ELMKLEQENMDKREEIVIKKEDPVPKTRTSNTSKDRASPERSSSKGSPSSRKSSSPKHRA
GKGGNSSKKEKKSSTSSVISSPVSDQTRAEETDSRSSKSGHGKRKGPRTPSPPPPVPLES
PVTGKKHKNKHKNKEKCEDKPKEGKERGRDTEKHKEKKEKRRDRSDSSHKAKRSITSEER
SGSLSPPSREASPPARRRSSSPKPTSQKQSSQQRSRTPPRHHRSPSPPSRQHHSPSSRSG
SSAQRHSPSPRHRRGSISPLYRDLPPPSSSSPPPTQSSRRSRSPLTPQRDPSPTPAPRRS
SPSARHRSQGRERERGRSERDRSPILQERRHERRDESRGKREKDSSRDERDYEIEQSSSR
DDRDARDGRDRRGERDRRDVREERQHRGEVKDTRDTRAGETRDRSGRESLEHRERDRDRE
RERERERERERNETHRKEETTAQEERNYGRGHAREELRNDSRVDNRNESRAERTGRGRGR
GDATEKGSARGGRASQADTSSASGHDSWESRSSGLRERSSERNADRDRYDNDRQRGEHPR
DERRGGQAERDRRDNRERAEQRAPSPIRQQNRSEDLDREDRRDDRRNDRGDDRRDDRTRE
REKERDREREREREREKEREREKEREREAERERERAREREREREREREREREREERERER
EREREEREREREEREKERERERKEREREREQRERERQREWDEREKGREERRERRDDSRDD
RSARDAHEERKNTRKRHRAENTPSPRPSPKRGRDVSPADSDGYNSTEEKGDKHRLLSQVV
RPQETARSPVRSFAEDKHNRWKDDDRRGDKKESRCRHEEVDSRGERAAGRGAERRGEQVS
DISATGISESRRGKEQRDLPAAAVTPPPPPPPASIEDRDSLTVVHEDGKKKTKSLKKNLK
KIRKEEESGGGERSNPEPPSSSSVTEAPQALLSPRKTAKKKVLERKRKRSRGPESDVSDD
ELIAQHPLNKRRRGPRTPPPINKDDLPSQRALTAGQSSLSAKMDANFSDWSDEDVPERGE
TSSASLPSDRPPERLLPSERASRRGARGGGRDRTDPPIAPLLPDPPMLIQSLPLQPLLPQ
HMLRKPQQADMQQQRSSSMGSNQSRASSRRLRSPSNESAHRDEGPQGLRSRRGLMQGGNS
RERERERERERDRERERERERERDRATASEQMGGERKSRIDQLRRGEPSRSTSSDRQDSR
SHSSRRSSPESERQARSRAGSYDSRERDRERERDQLDREREKKDHRQMQNQQTQQRDWDP
EPREWGGRGREPLLRGNREPIRERDLREMRERERLLPEGLLAHERIDRERGERDRERERE
RMLPFDLQTHREPKSRSETKMERGEYEPLLPREALIEVDKPTDNSQLQGEASEPKMDSLD
EEEDGKGDDAQSAVSGGEEYEPISDDELDEILADSQKRDEQQDDEKISGPLDVIDVDWSS
LMPKQKQEPRTPGAALLRFTPGAVLLRAGVSRRLAGSQLLARVKEVCSRELEDPKDADKL
LEHDLGALNMAAYNRRMERANLLRSLGPCCKALCARRDIAIRRQLLKNDKGTTKQIYTSA
PVVDNELVQLSLRLFKKKMASSLSSGQEKTDTAPAAQQLSAPAELCVS
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaatcaggcggaaggttacagtggagaattcgaagaccatatcggacagcagc
agtagcacgaccaccccctcccgcaggcccagcgtgtttgagagactcgggcccagcacg
gccagtaatgcagcagagactcattgtagaaactggttaaagactgggaactgcagttac
ggtaacacgtgtcgatacacacatggaaccccatcacgaggaaaaggcttctctggaacg
ttcaacaggtcagccgagaggcccactggggatctccgggagaggatgaagaataagaga
caggatgtagatgctgacacacagaaaagagatacagacgagcccacatcacccacaacc
agacagcgagattcttcccgaggcagacacagggagaaagaggatattaaaatcacaaag
gaacgcactccggctagtgaagaggagacagcagattgggaagccactcgtgaagattct
gataacggagactacgatcacgagctatctcttgagatgaagagacaaaagattcagcgt
gagctgatgaagctggaacaggagaacatggacaaacgagaggagattgtcattaagaaa
gaggacccagtccctaagaccaggaccagtaatacttcaaaggacagggcttctcctgag
cgcagcagttctaagggatcaccctcgtcccgtaaatccagctcacccaaacacagagca
gggaagggtgggaactccagcaagaaagagaagaagtcctctacttcttcagtcatttcc
tctccagtttctgaccagacccgggcagaggaaacggacagcaggtcatctaaaagtggg
cacggcaaaagaaaagggccacgaacgcccagccctcctccacctgtccctttggagagc
ccagtgactgggaagaagcacaaaaataaacacaagaacaaggagaagtgtgaggacaaa
cctaaagaaggcaaagaacgaggacgagatacggagaaacacaaagagaaaaaggaaaaa
cgcagggacagatctgatagttcccataaagccaaacgctcaataacatcagaagaacgt
tctggaagtctttccccaccctcaagggaagcgtcacccccagccagaaggaggtcatcc
tcccctaaacccacttcccaaaaacagtcctcgcagcagaggtctagaactccaccccgt
caccaccgcagcccctcccctccctcccgacagcaccactccccatcctcacgctctggc
tcctcggcccagagacactccccatctcctcgccacaggcggggttctatctctcctctt
taccgagaccttcctcctccatcttcatcctcacctcctcccactcaatcctcacgccgc
tcccgctctccgctcaccccgcagagagacccttcaccaacacctgctcctcgcaggtcc
agccccagtgctcgtcaccgctcccagggcagagagagggagagggggagatcagagcgg
gacaggagtcccatactgcaagagagacggcatgagcgcagagatgagagtcgtggaaag
cgtgagaaagacagcagccgtgacgagcgcgactatgagatcgagcagagctcttctcga
gatgaccgtgatgccagggatggccgagatcggcgcggtgaacgggatagaagagatgtc
cgggaagaacggcagcaccgtggggaggtcaaagacacccgggacacccgtgcaggagaa
acacgagaccgctcaggacgagaatccctggagcacagagagagagaccgggatcgggag
agagaaagagagagggaaagagagagagaacgaaatgaaacacatagaaaggaggaaacg
acagcccaggaggaaaggaattatggaagagggcatgcaagggaggaattgagaaatgac
agtagagtggacaacaggaatgaatctcgagctgaaagaacaggcagaggaaggggccgt
ggggatgccacagagaaaggttctgctcgtggtggtagagcgtcacaggcagacactagc
agtgcaagtggacatgacagctgggagtcccgcagcagtggtctgagagagaggagctca
gagagaaacgctgatcgtgatcgctacgataatgacagacagcgaggggaacatcccaga
gatgagcgacggggaggacaagcagagagagaccgccgtgacaacagagaaagagcagaa
caaagagcaccttctcctatccgccagcaaaaccgcagtgaggaccttgatcgtgaagac
agaagagatgatcgtaggaatgatcgaggagatgacagaagagatgaccgcacccgtgag
agagagaaggaaagggatagagaaagagagagggaacgggaaagagagaaggagcgagag
agggagaaagaacgggaaagagaagctgaaagggagcgtgaaagagccagggagagggag
cgggagagagaaagggaaagagagcgggagagggagagggaggagagagaaagagagagg
gaaagagaacgggaggagcgggaaagggagcgagaagagcgggagaaagaaagagaacga
gagaggaaggagagggaacgggaaagggagcaaagagagcgagaacggcagagggagtgg
gatgagcgagaaaaagggagggaagagaggcgggaaagaagagatgactcgagagatgat
cgttctgcccgagatgctcatgaagagagaaagaacactcgtaaaagacatcgtgctgag
aacactcccagtccacggccatctcctaaaagagggcgagatgtgagccctgcagacagt
gacggttacaacagcactgaggagaaaggtgataagcaccgattgttgagtcaagtggtt
cgtcctcaagagacagcccgctcacctgtccgctcctttgctgaagacaaacacaaccgc
tggaaagatgatgaccggcgtggagataaaaaagaaagccgttgccgacacgaggaggtg
gattcccgcggtgagagagcagcaggaagaggagcagagcgtcgtggagaacaagtttct
gacatttctgctacaggcatctctgaatccagaagagggaaagagcaaagggacctccct
gctgcagccgtcactcctcctcctcctcctcctcctgcttccatagaggacagagactct
ttaacagttgttcatgaagacgggaagaaaaagactaaatctctgaagaaaaatctgaag
aagatccggaaagaggaggaatctggcggaggggaacgtagtaaccctgaacccccgtcc
tcctcttctgtaaccgaagccccccaggctctcctctcacctcgcaagacagctaagaag
aaagtcttagaaaggaagcgcaagcgttcacgtggtcccgagtcagatgtttctgatgac
gagctgattgctcagcatcccctcaacaagaggcgacgaggtccacgcacaccaccgcca
atcaacaaggacgaccttccctcccagagggctttaacggctggacagagttccctctct
gccaaaatggacgccaactttagtgactggtctgatgaggatgtaccagagcgaggcgag
acatcctctgcctccctgccatccgataggcctccggagcggctgcttccctccgaacgt
gcttctagacggggtgcacgcggtggcggtcgggaccgcacggacccccccatagccccc
ctgctccctgaccctccaatgctgatacagtctcttcctttacagccgttactgccacaa
cacatgctgcgtaagccacagcaagcggacatgcagcagcagcgcagtagcagcatgggc
agcaaccaaagccgcgcttcttcgagaagactacgctcgccctccaatgagtctgcccac
cgtgacgaaggccctcagggactcaggtctcgcagaggactcatgcaaggtggcaattct
cgggagagggagcgagagcgggagagggaacgggaccgagagagggaaagggagagggag
agagaaagggacagggcaacggccagtgaacagatgggaggagagaggaagtcaaggatt
gatcagctcagaagaggagaacccagtcgaagtacttcctcagaccggcaggactcccgg
agtcacagttctcgtcgtagttcaccagagtctgagcggcaggctcgctccagagccggc
tcctacgacagccgcgagcgtgaccgagaacgagagcgcgatcagttggatcgagagcgt
gagaaaaaggatcaccggcagatgcaaaatcaacaaacccaacagagagactgggaccca
gaacctcgtgagtggggtgggcggggcagagagcccctcctccgtggcaaccgcgagccg
attagagagagagacttgcgggagatgcgtgaaagggaacgactcttacctgaagggctg
ctggcacatgaacgaatagatcgtgagcgcggtgagagggaccgtgagcgtgaacgggaa
aggatgcttccgtttgaccttcagacacacagggaaccaaaaagcagatctgaaactaag
atggagaggggagagtatgagcctctgctgcccagagaagccctcatagaagtagataag
cccacagacaactcacaactgcaaggggaagcatccgaacccaaaatggatagtcttgac
gaagaggaggatggaaagggggatgatgctcagtctgccgtctcaggtggtgaggagtat
gagccaatcagtgatgatgaactggatgagattttggctgacagtcaaaagagggacgaa
cagcaagatgatgaaaagatttctggacccctagatgtgattgatgtagattggtccagt
ttgatgcccaagcaaaaacaggagcctagaactcctggggcagcgctgctccgattcacc
ccaggggctgtgctgctcagagcaggagtgtccagacgcttggcggggtctcagctcctt
gccagagttaaagaagtgtgttccagagagttggaagaccccaaagatgctgataaactc
ttagagcatgatctgggtgctctaaacatggctgcatacaacaggagaatggagagggcc
aacctactgaggagcctgggcccttgctgcaaggccctgtgtgctcgcagagacattgcc
atacgcagacagctcctgaaaaacgacaagggaacgaccaagcagatctacaccagcgct
ccagtggtggacaatgaacttgtgcagctgagtttacgtctctttaaaaagaaaatggcc
tccagcctgtctagtggacaggagaagactgatacagcccctgcagcccaacagctcagc
gcgccagcagagctatgtgtctcctga
DBGET
integrated database retrieval system
