Puntigrus tetrazona (Sumatra barb): 122350584
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Entry
122350584 CDS
T08985
Symbol
dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122350584 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122350584 (dmxl1)
Membrane trafficking [BR:
ptet04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122350584 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
122350584 (dmxl1)
RAVE complex
122350584 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
NBCH_WD40
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_TEP1_C
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
122350584
NCBI-ProteinID:
XP_043103134
LinkDB
All DBs
Position
8:complement(1016890..1057927)
Genome browser
AA seq
2887 aa
AA seq
DB search
MNLHQVLTGAANPGDNCFSVGSINNQPFTAYASGCDIVILGSDFERIQIIPGANHGNIQV
GCVDCSLQGGQIAASYGNIVCVFEPVEVSPQGKAQKKLNYHWQKSGQFVLQSVAHILTWH
PTGSCLLTGSGCLQLWCDGQSDPAPQSSWRCVWQCKSAAPTHFIKFSLDGEFFATAGQDD
CLVKVWYSSSKWQADVTKLFTPLDLRSGAQISFSFIYLAHPRSVTGFSWRKTSKYMPRGG
VCNVLLTCCKDSVCRLWAETLLPSDCLLSGLRHTHSSNDVMKNNGMKKISSDSRAQSQSP
LELKLKPSWREEVRCLSQLSYSGPLPQQQNKHNTHRTNMLHANALCHFHIAASINPATDI
PLLPSISSMNGSDEEEPGGPFTVHWLDNKELHLTLSMEVFLQQLRSGSEQNGPTERYDAD
EEGSGPDAASLPAPAVDHQVDVLLGDWNRAADMLFSIHPMDGSLLVWHVDWLDEYQPGMF
RQAQVSFVSRIPVAFPTGDANSLSRSVVMYACNRNVDLAIQHVRQRPAGLQHSSSSALIG
QSQSKPSSSSLRLSIFTPSVLMVSKHADGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHR
FHLNELACHSLLPLLLTTSHHNALRTPAAALTGPGRGSRVRQDPSAVYSELILWRVDPVG
PLSFSGGVSELARINSLHASAFSNVAWLPALIPSNCLGVYGNSPSACFIASDGHSLRLYQ
AIIEAKKLLSELSNPDISKHVGEVFNIISQQSTARPGCIIELDAITDFQGKETQLLHVFE
EDLILGSEKADSCLQDSVPSRTLFSARFFLVVLELTQSGRSLLHMWHLQLDAVPVIMEQT
QTPDREAVSPSPANGSQFNFETAGSPQTPRPNLKTSNLQSACRLALTNTKVFSQELGLPP
GVEVLRVSPAAGHLSASSLQPAGRSPYLLATSCSDGSVRFWRCSAASDPDVSADPSYVWE
EWPLLVEEGLASSSALSLSGQLMGLSCCHTSRVAVAHRSPEPVMNISVFQCDSTGGSQWL
LEQTLKVCHAGDKSLSNGSSVKRQVHLDWVSREDGSHILTVGLGSKLYMYGMLSGKPPDL
GLSDCNKEQNGSRLVLLRAVDLVSSVEGSPPVPVSLSWVRDGILVVGMDCEMHVYSQWQP
PAPVKPSLHDSVTSLKQEGLSPNPSKKTLTRSMTSLAQKLSGKRTAYDLPAEMEDSGLFE
AAYQLFPTLPQYHPVQLLELMDLGKVQRAKAILSHLVKCIAGEIVSMKDATINQERRLRS
LTISASGSTARDPKMFSKAESADYTEIDSIPPLPLYALLAADEETALSAKERSESVSAEG
QSDAYEQLFQSAGVGADDMDPFDGDEEEACAKVIDLSKYSPTFFGSEHAQVLSGHLLHSS
LPGLTRMEQMSLMALADTIASTRTDVGENQGKGQGGETLDECGLKFLLAVRLHTFLLTSL
PPAHRAQLLCQGLSTCHYAWAFHSEAEEELLNMLPALQKGDPSWPELRAMGVGWWLRSTN
KLRRCIEKVAKAAYQRNNDPLDAALFYLAMKKKAVVWGLYRSQHNAKMTAFFSNNFSEDR
WRKAALKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCIEKMQDLQLALVVCRLYESEFE
MSCSYKRILQRQVLGQDRQIAAHQDPFLRSMAYWVLDDYSRALDTLLEPNTDSSHEGAGS
SPCSPDVFNFYTYLRTHPLLLRRHFGSSEKAKVGLTAEGRAVDSVSLTERRLFFTAAYAH
LQAGCPMLALEVLSKMPRAVKRSKPSESSPASLSEREGQASALDWSQPALNGLESVSSLS
SPREDSQSDSVLSFDWSQPSVTLPDEPLELKWDSDKDDSDEEESGLAMKTIRTEKDKVSP
EAASTPRDYALDFCSEDSAGLSEDMLAAQLKFSSCLKILTTELRTLSTGYELDGGKLRHQ
LCHWLERAVAALQSCCGYNPFLQLLPEGISADLSQPDDPEERGSAQQTRELQQRRRLWLK
RNQPLLRIFLSYCSLHGSHGGGLASVRMELILLLQESQQDGGLQISAPAPQHLSVPLFLA
WTASSKTVVANPIVHLTNLTHDILHTIIALDAPPHPDITNNEIYVMHTLAASLSACIYQS
LCDGHSYSHVNPFTGITYQSVLLTHQPPVRSVSMEEAVLPNTSPAQWPGVSALMRLLSAS
GDENQPGLPVLLCEVLTAVFLSLFVHGLATHSSHELFRIVAHPLNSKLWVAVFGGGARAP
VQEKPGSPTVEDAERKQRRFRLRSSRSNSREVPDSPVSPRAVVMEPDTLVCRERFVPPEL
SIWDYFIAKPYLPSSASRVEYDSEESQGSEEEEEEEEEEDGDSFDPNSPLAEHSNNNSYS
WYLMRLAMVQTVLFNLKTLYPMAGHDLLDLPVCSPLCHAALKTLQRWEQLLLKRLEIFGG
PPSRFISTQLLEESVSSGPALLRHKALFEPSNTPFRSRRRSALPVRRLWQYLVKQEEVQE
TFIRNIFIKKRDQNEETVPPDSTHNQVEADLGFPGGKARIIHKESDIITAFAINKANRNC
LVVASTHDIQELDVSSILATQILTWVDDENEAEVKGTDDFLVVHARDDFSALHGSTPYTH
SSPGTPINMPWLGGLQTGRGAAVLIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGH
SQQITCFRSPGNSRVTRIRFNYQGNKFGIVDADGALSLWQTSTSGNTPKPYLTLQCHNKT
ANDFVFVGSSSLIATAGLSTDNRNVCLWDTLVTPAYSLVHGFVCHESGSTVLALASKQQL
LLSGGRRGWIGVLDLSLKIQRQSFQAHDSPVKALAVDSTESCFISGSAEGNIKVWSMSTQ
SLLHTFSNEHARQSLFRNLGTGVMQIETGPANHVFSCGADGTMKLRLLPDALSLFCSAAR
SDVRFIM
NT seq
8664 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctcacaggagcggcgaaccccggagacaactgcttctctgtg
ggcagcatcaacaaccagcccttcacggcctatgcctctggctgtgacatcgtcattctg
gggagtgactttgaaaggatccagatcatcccaggagctaatcatgggaacatccaggtg
ggctgcgtggactgttcactgcagggcggacagatcgcggcgtcgtacggaaacattgtg
tgtgtgtttgagccggtggaggtcagtccacaaggaaaagcacaaaaaaagctgaactat
cactggcagaagagcggtcagttcgtcctgcagtcggtcgctcatatcctgacgtggcac
cccacaggctcctgtctcctgaccggctcgggctgtctgcagctctggtgtgacggtcag
tctgaccccgctcctcagagctcctggagatgtgtgtggcagtgcaagtccgccgctccc
actcacttcatcaagttctccctggatggagagtttttcgccaccgcaggacaggacgac
tgtctggtgaaggtctggtacagcagcagtaaatggcaggcggacgtcactaaactcttc
acgcccctcgacctgcgctccggagcccagatcagcttctccttcatctacctggctcat
cctcgctccgtcaccggcttctcctggaggaagaccagcaagtacatgcccagaggcggt
gtgtgtaacgtgctgctgacctgctgcaaggacagtgtgtgtcgtctgtgggccgaaacg
cttctgcccagcgactgtctgctgtctggactcagacacactcacagcagcaatgacgtg
atgaagaataacggcatgaagaagatctccagcgacagccgagcgcagagccagagcccg
ctggagctgaagctgaagccgtcgtggagagaggaggtgcgctgtttatctcagctctcc
tacagcggtcctcttcctcagcagcagaacaaacacaacacgcatcgcacaaacatgtta
cacgccaacgctctgtgccacttccacatcgccgccagcatcaacccagccacagacatc
cctctgctgccctccatctcgtccatgaacggctctgatgaggaggaaccgggcggcccg
ttcaccgttcactggctcgataacaaagagctgcacctgactctgagcatggaggtgttt
ctccagcagctgaggagcggctccgagcagaacggacccacggagcgctacgatgctgat
gaggagggcagcggtcctgatgctgcgtctcttccggcgccggccgtggatcatcaggtg
gacgtgctgctgggagactggaacagagccgcagacatgctgttcagcatccacccgatg
gacgggtctctgctggtgtggcacgtcgactggctggacgagtaccagcccggcatgttc
cggcaggcgcaggtgtcgttcgtgtccaggattcccgtggccttccccaccggcgacgct
aactctctcagccgcagcgtggtcatgtacgcctgcaacagaaacgtggacctggccatc
cagcacgtccgtcagcgtccagcgggcctgcagcactcgtcctcgtccgccctgatcgga
cagagccagagcaagccctcgtccagcagcctgcggctcagcatcttcacccccagcgtc
ctgatggtctccaaacacgccgacggctcgctcaaccagtgggcggtcagcttcgccgag
gactcggccttctccacggtgctcagcgtctctcacaagtcccggtactgcggccaccgc
ttccacctgaacgagctggcctgccactctctgctgccgctgctgctgaccacgtctcac
cacaacgccctgcggacgcccgccgccgccctgaccggcccgggccgcgggagccgagtg
cggcaggaccccagcgccgtctacagcgagctgatcctgtggcgggtggatccggtggga
ccgctgtccttctcgggcggagtgtcggagctggccaggatcaactccctgcacgcctcc
gccttctcgaacgtagcctggctgcccgcgctcatccccagcaactgcctcggtgtgtac
ggaaactcgcccagcgcctgcttcatcgccagcgacggacactcgctgaggctctatcag
gccatcatcgaggccaagaagctgctgagtgaactctccaaccccgacatctccaaacac
gttggagaggtgtttaacatcatcagccagcagtcgacggccagaccgggctgcatcatt
gagcttgacgccatcactgacttccaggggaaggagactcagcttctgcacgtgttcgag
gaggacctgatcttggggagcgagaaggcagacagctgcctgcaggactctgttcccagc
cggacgctgttctccgctcgcttcttcctggtggtgctggagctcactcagagtggaagg
tcgctcctgcacatgtggcatctacagctggacgccgttcccgtcattatggagcaaact
caaactccagacagagaggccgtgtctccatctcctgcaaacggctcacagtttaacttt
gagacggccggctctccacaaaccccgagacccaacctgaagacgtcgaacctccagagc
gcctgccgcctcgccctcaccaacaccaaagtgttcagccaggagctgggtctgccgccg
ggcgttgaagtcctgcgagtatctcctgctgcaggtcatctgagcgcctcgtctctgcag
ccggccggacgctctccgtatctgctggccacgtcgtgctctgacggatccgtccggttc
tggcggtgcagcgccgcctctgaccctgacgtctccgctgacccgtcgtacgtctgggag
gagtggcctctgctggtggaggagggcctggccagcagcagcgctctgagcttgtccggt
cagctcatgggtctcagctgctgtcacaccagcagagtggccgtcgctcaccggagccct
gagcccgtcatgaacatcagcgtcttccagtgcgactccaccggaggctctcagtggctt
ctggagcagactctgaaggtctgccacgcgggtgataaaagcctgagtaacggcagctct
gtgaagagacaggtccacttagactgggtctccagagaagacggctctcacatactaact
gtaggtctaggatccaaactttacatgtacggcatgctttctggaaagcctccagatctg
ggtctctccgattgcaataaggagcagaacggctctagattggtgctcctgcgagcggtg
gacctggtgtcctcggtcgaaggttctccacctgttcccgtctctctatcctgggtgcga
gacggcatcttagtagtcgggatggattgcgaaatgcacgtctactctcaatggcagcct
ccggctccggtcaaaccgtcgcttcatgatagcgtgacgtcgcttaagcaggagggactc
agtccgaatccttctaaaaagaccctcaccagatccatgaccagcttggctcagaaactc
agcggaaagagaacggcgtacgacctcccggccgagatggaggattctgggttgtttgag
gcagcctatcagctgtttcctacgctcccccagtatcacccggtgcagctgctggagctc
atggacctcgggaaggttcaacgggctaaagccatcctgtcccatctggtgaagtgcatt
gccggggagatcgtgtcgatgaaggacgctacgattaaccaggagcgccgtctgcgctcg
ctcaccatcagtgccagcgggagcaccgcccgcgatcccaagatgttcagcaaagccgag
agcgccgactacaccgagatcgactccatcccgccgctgccgttgtacgcgctgctggcc
gccgacgaggagacggcgctgagtgccaaagagcggtcggagagcgtgagcgccgagggc
cagagcgacgcgtacgagcagctcttccagagcgccggggtcggcgccgatgacatggac
cctttcgatggagacgaggaggaggcgtgcgctaaagtcatcgatctgtcgaaatacagc
cctacgtttttcggctcggagcacgcacaggtgctgtcgggacacctgcttcactccagc
ctgccgggcctgacgcggatggagcagatgtctctgatggcgttggcagacaccatcgct
tccaccagaaccgacgtcggagaaaaccaagggaaaggacaaggcggagagactctggat
gaatgtgggctgaagttcctgctggccgttcgtcttcacaccttcctcctgacgtctctg
cctccggctcatcgcgctcagctcctctgccaaggactgtccacctgccactacgcctgg
gccttccactccgaggctgaagaggagctgctcaacatgctcccggcgctgcagaaagga
gatccctcgtggcccgagctgagagccatgggcgtgggctggtggctccggagcaccaac
aagcttcgcagatgcattgagaaggtagcaaaagctgcttatcagagaaacaacgacccg
ttagacgcagccttgttttatctggccatgaagaagaaagctgtggtttggggactgtac
aggtctcagcataacgccaagatgacggcgttcttcagcaataacttcagcgaagaccgc
tggcggaaggcggcgctgaagaacgctttctctctgctcgggaagcaacgtttccaacat
tctgcggccttctttctgctggctggatccctcaaagatgctgttgaggtgtgtatagag
aagatgcaggaccttcagctggctctggtggtctgtcggctctacgagtctgagttcgag
atgtcctgcagctataagagaatcctccagaggcaggtgttgggtcaggaccggcagatc
gcggcccatcaggaccctttcttacgcagcatggcgtactgggtcttagatgactacagc
agggctctggacacgctgctcgagcccaacacagactcgtctcatgaaggagccggatca
tctccctgcagtcctgatgtttttaacttctacacctacctccgcacacacccgctgcta
ctgcgccgtcacttcggctcttcagagaaagccaaagtgggtctgaccgctgaaggccgc
gccgtcgactccgtcagcctcaccgagaggaggctcttcttcaccgccgcttacgcacac
ttacaggccggctgccccatgctggctttagaggtgctctccaaaatgccccgggcggtg
aagcgctcgaagcccagcgagagttcgccggcgtctctgagcgagcgggaaggccaggcc
tcggctctggactggtctcagccggctctcaacggcctggagtcggtgtcctcgctctct
tctccccgagaggacagtcagtcggactcggtgctcagtttcgactggagccagccctcc
gtcacgctgccggacgagcctctggagctcaagtgggacagcgataaagacgactcggat
gaggaagagtcgggactggcgatgaagaccatccgcacggagaaagacaaggtctctccg
gaagccgcctccacccccagggattacgccctagatttctgctctgaagactcggccggg
ctgagcgaggacatgctggcggcgcagctgaagttcagctcctgtctgaagatcctgacc
acggagctgcggacgctgtccacggggtacgagctggacggagggaagctcaggcatcag
ctgtgtcactggctggagcgagccgtggcggcgctgcagagctgctgcggatacaacccc
ttcctccagctgctgcccgagggcatctctgccgacctgagccagccggacgatcccgag
gagcggggctccgctcagcagacccgagagctccagcagcggcgcaggctttggctgaag
aggaaccagccgctgctgcgcatcttcctgagctactgcagcctgcacggctctcacgga
ggaggactggcctcggtccgcatggagctcattctgctgctgcaggagtcccagcaggac
ggcggtctgcagatctccgctcctgctcctcagcacctctctgttcctctcttcctggct
tggaccgccagctccaaaacggtggtggccaatcccatagtgcacctgaccaacctcacg
catgacatactgcacaccatcatcgctctggacgccccgccgcacccggatatcacgaac
aacgagatctacgtgatgcacacgctagcagcttccctctccgcctgcatctatcagagt
ctctgtgacggacacagttacagccatgtgaatccgttcacgggcatcacgtaccagagc
gtgcttcttacccatcagcccccggtgaggagcgtcagcatggaggaggccgttctgccc
aacacctctccggcgcagtggcctggtgtaagcgccctgatgcggctgctgagcgcgtct
ggagacgagaaccagcccggtctgcccgtgcttctgtgtgaggtcctgaccgccgtcttc
ctcagcctgttcgtccacggcctggccactcactccagccacgagctcttccggatcgtc
gctcacccgctcaacagcaagctgtgggtggccgtgttcggcggcggcgctcgtgctccg
gtgcaggagaagcccggctcacccacagtggaagatgcggagcggaagcagaggcgtttc
cggctgcgttcctctcgcagtaactccagagaggttcctgacagtccggtcagccccaga
gctgtggtgatggagccggacacactcgtctgtagagagcgcttcgttccgcctgagctc
agcatctgggattatttcatcgcaaagccgtacctgccttcgtccgccagccgagtggag
tatgactctgaggagagccagggcagtgaggaagaggaagaggaggaggaggaagaggat
ggggattcctttgatcccaactctccgctggcagagcattccaacaataactcatacagc
tggtatctgatgcgcttggccatggttcagacggtactgttcaacctcaagaccctctac
ccgatggcaggtcatgacctcttagatctgcccgtgtgctcccctctgtgtcacgcggct
ctgaagacgctccagcgctgggagcagctgctgctgaagaggctggagatcttcggaggt
cctccgtccaggttcatcagcacacagctgctggaggagagtgtgtcgtcgggtccggcg
ctgctgaggcacaaagccctgttcgagccctcaaacacaccctttaggtcccggcggcgc
tccgctctgcccgtcaggcggctctggcagtatctggtcaaacaggaagaggttcaggaa
accttcataagaaacatcttcatcaagaaacgagatcagaacgaggagactgtgccgccg
gactccacacacaaccaggtcgaggctgatctgggatttcccggaggaaaagctcgcatc
atccacaaggagtcggacatcatcacggcgttcgccatcaataaggccaaccgtaactgt
ctcgtggtcgcctccacccacgacatccaggagctggacgtgtcctccatcctcgccacg
cagatcctgacctgggtcgacgacgagaacgaggccgaggtcaaagggacggatgacttc
ctggtggttcacgctcgagacgacttcagcgcgcttcacgggagcacaccctacacacac
agcagccccgggacgcccatcaacatgccctggctgggcggcctgcagacgggacgagga
gcagccgtgctcatcaaacgtaacatcaacaacgtgaggaggatgacgtcacaccccaca
ctgccctactatctgaccggagctcaggatggtagcgtgcgcatgtttgaatggggtcat
tcacagcagatcacctgcttcaggagccccgggaactccagggtcaccaggatacgcttc
aattaccagggcaataagtttgggatcgtggatgcagacggagcgctcagtctctggcag
accagcacctcaggaaacactcccaaaccctatctgacgcttcagtgtcacaataagaca
gcgaacgactttgtgtttgtgggctcttcatctctcatcgccaccgcaggcctgtccaca
gacaacaggaatgtgtgtctgtgggacactctggtcacaccagcatacagtctggtccac
ggtttcgtgtgtcatgagtctggctctacggtcctggctctggcctctaagcagcagctt
cttctcagcggaggccggcggggctggatcggggttctggacctcagtctgaagatccag
aggcagagcttccaggcccacgactctccggtcaaagctctggccgtcgactcgaccgag
agctgcttcatcagcggctcggccgagggaaacatcaaggtgtggagcatgtcgactcag
agcctcctgcacaccttcagtaatgaacacgctcgtcagtcgctcttccgtaacctgggc
acaggtgtgatgcagatcgagacgggtccggccaatcacgtcttctcctgcggcgcagac
ggcaccatgaagctgcggctgctccccgacgctctgagcctgttctgcagcgcagctagg
agcgacgtccggttcatcatgtag
DBGET
integrated database retrieval system
