Puntigrus tetrazona (Sumatra barb): 122350951
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Entry
122350951 CDS
T08985
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03272
Virion - Hepatitis viruses
ptet04382
Cornified envelope formation
ptet04514
Cell adhesion molecules
ptet04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
122350951 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122350951 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122350951 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122350951 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptet03037
]
122350951 (cldn5a)
04147 Exosome [BR:
ptet04147
]
122350951 (cldn5a)
Cilium and associated proteins [BR:
ptet03037
]
Other cilia and associated proteins
Stereociliary proteins
122350951 (cldn5a)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
122350951 (cldn5a)
Exosomal proteins of colorectal cancer cells
122350951 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
DUF1129
Motif
Other DBs
NCBI-GeneID:
122350951
NCBI-ProteinID:
XP_043103668
LinkDB
All DBs
Position
8:2912692..2913737
Genome browser
AA seq
215 aa
AA seq
DB search
MASAALEILGLTLCVFGTLLEMTACGLPTWKVTAFIEANIVVAQTIWDGLWMSCAVQSTG
QMQCKMHDSMLALTHDLQAARALTVISSVMCVVGLMVVIAGAQCTNCIKTESVKARVVNV
GGVIYIVSAVFVLVPLCWMANNIISDFYNPQVPAAQKREIGAALYIGWAATALLLLGGIM
LCCSCPSSGSSGYSAKYSPTKRAASNGDYDKRNYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcggctctggagattctgggtctgaccctgtgcgtcttcggcacgctcttg
gagatgaccgcctgcgggctgcccacctggaaggtgaccgccttcatcgaggccaacata
gtggtggcgcagaccatctgggacggcctgtggatgtcgtgcgccgtgcagagcaccggc
cagatgcagtgcaagatgcacgactccatgctcgcgctcacccacgacctccaggccgcg
cgcgcgctcacggtcatctcgtccgtcatgtgcgtcgtggggctgatggtggtgatcgcc
ggcgcgcagtgcaccaactgcatcaagacggagagcgtcaaggcgcgcgtggtgaacgtc
ggaggcgtcatctacatcgtcagcgccgtcttcgtgctcgtgcccctgtgctggatggcc
aacaacatcatctccgacttctacaaccctcaggttccggcggcgcagaagcgcgagatc
ggcgcggcgctctacatcggctgggcggccaccgcgctgctgctgctcgggggaatcatg
ctctgctgctcgtgtccctcctcggggagctcgggctactcggccaaatactcgcccacc
aaaagagcggcatccaacggggactacgacaagaggaactacgtttag
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