Puntigrus tetrazona (Sumatra barb): 122351076
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Entry
122351076 CDS
T08985
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122351076 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122351076 (ogg1)
Enzymes [BR:
ptet01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
122351076 (ogg1)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122351076 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
122351076
NCBI-ProteinID:
XP_043103866
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All DBs
Position
8:complement(23989562..23994326)
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AA seq
393 aa
AA seq
DB search
MSQHALFSESCKAWRSLPCQQSELRLDLTLGCGQTFRWRETADGHWTGVMRGKVWTLTQT
EDTLWYYVYSHQINPETENKQKWKEEEEEQLLGKMSKRKTDMKQEEAGLCTVMSEPDNKD
EELLMDYFQLGVKLGDLYRHWSTLDPHFKHTASIFTGVRLLHQDPVECLFSFICSSNNHI
SRIQGMVDRLCQTLGTLLCKLDDVAYHDFPHLQALTDPSVEMNLRDLGFGYRARFLQQSA
QVIVSSHDPDWLQSLCSIPYLQARDALRALPGVGLKVADCVCLMSLNKFEALPVDTHVWQ
IAKRDYNYAAGSNQKTDRVYKEIGDFFRKLWGPYAGWAQSVLFCADLKRFQKLKEEIPAL
KDKTELKKKMKERTHDRCDEKQKRKKGKKQKRS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcatgctctgttctctgagagttgtaaggcatggcgttcactgccttgtcaa
cagtcagagcttcggctggatctcactctgggatgtggtcagacgttccgatggcgtgag
actgcagatggtcactggacaggagtaatgcgaggaaaagtgtggacactaactcaaaca
gaggatacattatggtactatgtttacagccatcaaataaatccagaaacagaaaacaaa
cagaaatggaaggaggaagaggaggaacaattattgggaaagatgtcaaaaagaaagact
gacatgaagcaggaagaggcaggattgtgcacagtgatgtcagagcctgacaacaaagac
gaggaacttctgatggactatttccagttaggtgttaaattaggggatctctacagacac
tggagcaccttggatccacatttcaaacacacagcaagcatctttacaggagtacgtttg
ttgcatcaagaccctgtggagtgtcttttctcattcatctgtagctcaaataatcacatc
tcccggattcagggcatggtcgacagactgtgtcagacacttgggactctcctctgcaaa
cttgatgacgtagcctatcatgatttcccccatctgcaagctctcacagatcctagtgtg
gagatgaatttgcgtgatttaggttttggctaccgtgctcgtttcctgcagcagagcgca
caagtcattgtgagctctcatgaccctgactggctccagtcgctctgcagcatcccctac
ttacaggctagagatgcactgagagctcttcctggagttggtctcaaggtggctgactgt
gtatgtctgatgtcactaaataagtttgaggctcttcctgtggacacgcatgtgtggcaa
atagcaaaacgtgattacaactatgctgctgggagcaaccagaagactgatagagtctac
aaagagattggtgacttctttagaaaactctggggtccttatgcaggctgggcacaatct
gtgctcttctgtgctgatcttaagaggtttcagaagctgaaagaagagattcctgcactg
aaagataaaacagagctgaagaaaaagatgaaggagagaacacatgacagatgtgacgaa
aagcagaaaagaaaaaaaggcaaaaaacaaaagaggtcataa
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