Puntigrus tetrazona (Sumatra barb): 122351155
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Entry
122351155 CDS
T08985
Symbol
ercc1
Name
(RefSeq) DNA excision repair protein ERCC-1
KO
K10849
DNA excision repair protein ERCC-1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03420
Nucleotide excision repair
ptet03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
122351155 (ercc1)
03460 Fanconi anemia pathway
122351155 (ercc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122351155 (ercc1)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
122351155 (ercc1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-GeneID:
122351155
NCBI-ProteinID:
XP_043103976
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All DBs
Position
9:complement(15909284..15913570)
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AA seq
341 aa
AA seq
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MEKKRFNINLDDTAFTKERSLVTSLFKAKDGQAETSSAQNALPAPGQPLSYADFVVQNKN
RALQGAAHVPEKQSRSDAAAQSNVNTADSGSVSTSSTDSGKPETEQRRPEKVPTEDQTKE
ESQSSESCIIPPHLLGSGNSIIVSPRQRGNPILKFVRNVPWEFGEVVPDYVLGRTTCALF
LSVRYHNLNPNYIHERLKQLGQSFTLRVLLVQVDVKDPHHALKELARISIMADCTLILAW
SPEEAGRYLETYKSYEKKPADVLKEQVEKNYLSQVTDCLTTVKSVNKTDAMTLLSTFSSL
EGIVKASKEELVLCPGLGPQKARRLYDVLHQPFIKTKKKES
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagaggttcaatatcaatttggacgacaccgcgttcacaaaggaaagaagt
ctggtgacatctttatttaaggccaaggacggtcaagcagagacctcatctgctcagaat
gctcttccagctcccggccaaccactgtcctacgcagattttgtcgttcagaacaaaaac
agagctcttcagggagcagcccatgtaccagagaaacaaagtaggagcgatgctgcagcg
caaagcaatgtaaatacagctgacagtggatcagttagtacatcctccacagactccggg
aagcctgagactgagcagcggagaccagaaaaagtaccgacagaagatcaaacgaaggag
gaaagtcagagttcggagagttgtatcattcctcctcatctcttaggatccggaaacagt
attattgtcagtcctcgacagagaggcaaccccattctaaagtttgtgagaaatgttcct
tgggaatttggagaagttgtgcctgactatgttttggggcggacaacttgtgctcttttt
ctgagtgtgcgttaccataatttgaacccaaactacatccacgagcgtctgaaacagttg
ggtcagagtttcaccctcagagtgttgctcgtccaagttgatgtgaaagaccctcatcat
gcactgaaagagcttgctcgcataagcatcatggctgactgtaccctcattttggcctgg
agtcctgaagaagcaggtcgttaccttgagacttataaatcctacgagaagaaacctgca
gatgttctgaaagaacaagtggagaagaattacctgtcccaggttacagattgtttaacc
acagtaaagtctgtcaataagaccgatgccatgactcttctgtctacattttcttctttg
gagggcatcgttaaggcatctaaagaagaactagtgttgtgtcctggacttggtccacaa
aaggcaagaaggctttatgatgtactgcatcagcccttcataaagaccaaaaagaaggaa
agctga
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