Puntigrus tetrazona (Sumatra barb): 122351185
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Entry
122351185 CDS
T08985
Symbol
dtx4b
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122351185 (dtx4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122351185 (dtx4b)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122351185 (dtx4b)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122351185 (dtx4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-rbx1
WWE_5
zf-RING_2
zf_RING_Vps8
PHD_NSD
zf-UDP
zf-ANAPC11
zf-RING_Vps41
PHD
zf-C3HC4_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
122351185
NCBI-ProteinID:
XP_043104015
LinkDB
All DBs
Position
1:complement(21866992..21882353)
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AA seq
727 aa
AA seq
DB search
MDTMSLASAAVVWEWLNEHGRWRPYSPAVSHHIEAVIRSDPRGGSVVLGRADSRLSPYII
DLHSMHQFRQDTGTLRPVRRSFYDPTSAPGQGWIWEWENDAGSWTTYDMEVIIALQAAWD
RQQPWLDLTSIGFCYFVDFQTMTQINRQTQRQRRIQRRSDMVYPLVSGSLPKTSQAWGTG
SGSGGIAKGLASGGGSTGALLGVGVSGSTLSRKGSSVYPNGALSVSSLAPPGQPCACQQC
ILVLSVKANGTSTQTLGRATKPNSPKSNFGTLPSSSASMSVLNSYSHTLPHGTSLKCSQT
EEAKKSAFEQSLSLLTSDTANLSVSSSRPTPPTLPSPNKQPSSAPSSSSSATFVPTAMLI
NTSTGPSSSTDLTSSSTSLPSQRSAACAAPLPTRASLTGLSRPALQKIAMAQSRALIASG
VPTVPVKNLNGSSPIHPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIRPIPGI
GNCCRKTTKKQARKGRTPEEVVKRYLQKVRNPPEEDCTICMEALGGPSGYKGPGVASVSR
AESVGRLAECGHLYHLQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPH
SLPGHPDCKTIRIIYNIPPGIQGPEHPDPGKPFTSRGFPRHCYLPDNEKGRKALRLLLVA
WDRRLIFSVGTSSTTGESDTVIWNEIHHKTEFGSNLTGHGYPDSGYTDNVVEELKAQGIT
EDEEQQL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatgtcgctggcctccgccgcggtcgtgtgggaatggctcaacgagcacggg
cgctggcggccgtacagcccggccgtgtctcaccacatagaggcggtgataagaagcgat
ccccgcggcggcagtgtcgtgttaggccgagctgacagccgcctatcgccctacatcatc
gatctgcactccatgcatcagttcagacaggataccggtacgttaagaccagtgcgacgc
agtttctatgaccccacctcagccccaggccaaggttggatatgggagtgggaaaatgac
gcaggttcctggacaacctatgacatggaggtgatcattgccttgcaagcggcatgggac
cgacagcaaccctggctagacctgacatcgatcggcttttgctacttcgtggacttccag
accatgacccagattaacagacaaacgcagcggcagcggcgcatccagaggcgctcagac
atggtttacccactagtctctgggtcgctgcctaaaacctcacaggcttggggtacaggc
tcagggtctggaggcattgctaagggactagcatcaggtgggggctcgaccggggcactt
ctcggggtaggtgtatctggatctaccttgagtagaaaaggaagttctgtttacccaaat
ggggcgctttcggtatcatctctcgctcctcctggacagccatgtgcctgccagcagtgc
attctggtgttgagtgttaaggcaaatggcacctcaacacagacactgggacgtgcaaca
aagccaaacagtcctaaatccaattttgggacacttccatcctcctctgcttccatgtct
gttttaaactcttattctcatacactaccgcatggcacgtctttaaagtgctcgcaaacg
gaagaagccaagaaatctgcttttgaacagtcattgtctcttctcacatcggacactgcc
aatctctcagtctcctccagccgtccgacacctcccactctgccatcgccgaataagcag
ccttcatccgccccaagctcttcgtcttctgcaacatttgtgccaactgccatgctcatt
aatacatcaaccggtccctcatcatccacagatttgacatcatcttcaacatcgttgcct
tctcaacgctctgccgcctgtgctgcccctctgccaactcgtgccagtctgacagggctt
agtcggcctgctttgcagaaaattgccatggcacagtcacgggcccttattgcctctggg
gtacccacagtaccagtgaagaatcttaacggctccagccctatccacccggctttagct
ggtattacgggtattctgatgagcgcagcaggactacctgtatgtttgacccgtccacca
aaactagtcctgcatcccccacctgtcagcaagagtgacataagaccaattcctggcatt
gggaactgttgccgcaagaccaccaaaaaacaagcacgcaaaggtagaacacctgaggaa
gtggtaaaaaggtacttacagaaggtcaggaatcccccagaagaagattgtactatctgt
atggaggctctgggggggccctcggggtataagggtccaggtgtagcaagtgtttctcgt
gctgagtcggttggaagactggcagagtgtggacatctttatcacctgcagtgcctagtg
gccatgtacaacaatggcaacaaagacggtagcctgcagtgtcccacatgcaagacaata
tatggagtaaagacaggcaaccagccccccggtaagatggagtaccatgtcatcccgcac
tcacttccaggacacccagactgcaaaaccattcgcatcatctacaacataccccccggg
atacagggtcctgagcatccagatccagggaagccttttacttcaagaggatttccacgt
cactgctatcttccagacaatgaaaaaggacgcaaggcgttaaggctgttattggtggcg
tgggatcgaaggctgatcttctcagtgggcacctccagcaccacaggagaatcagacact
gtcatctggaatgagatccatcacaagacagaatttggctccaatctaactggacatggc
tatccagattctggctatactgacaatgtggtagaggagctcaaagcccagggcatcact
gaagatgaggaacagcaactgtga
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