Puntigrus tetrazona (Sumatra barb): 122351615
Help
Entry
122351615 CDS
T08985
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04137
Mitophagy - animal
ptet04144
Endocytosis
ptet04145
Phagosome
ptet04148
Efferocytosis
ptet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122351615 (rab5b)
04145 Phagosome
122351615 (rab5b)
04137 Mitophagy - animal
122351615 (rab5b)
04148 Efferocytosis
122351615 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122351615 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122351615 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122351615 (rab5b)
04031 GTP-binding proteins [BR:
ptet04031
]
122351615 (rab5b)
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
122351615 (rab5b)
Endosome - Lysosome transport
122351615 (rab5b)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122351615 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
122351615 (rab5b)
Exosomal proteins of colorectal cancer cells
122351615 (rab5b)
Exosomal proteins of melanoma cells
122351615 (rab5b)
GTP-binding proteins [BR:
ptet04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
122351615 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
122351615
NCBI-ProteinID:
XP_043104756
LinkDB
All DBs
Position
9:complement(11210200..11216654)
Genome browser
AA seq
214 aa
AA seq
DB search
MSTRGTGRANGSLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLADKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAQSTRSCCGN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcgcgggaccggcagggccaatggaagcctaccgcagaccaagatctgccag
ttcaaattggtgctgctgggagacatggctgtcggcaagtccagcctagtgctgcgcttt
gttaagggccagtttgacgagtttcaggaaaccaccattggagctgctttcttggcacag
tctgtttgtctggatgacactacggtgaagtttgagatttgggacacagccggacaggag
cgctaccacagcttggcccccatgtactaccgtggagcccaggcggctattgtagttttt
gacatcaccaagcctgaaacatttgagcgagcgaaggcttgggtgaaagagctgcagcgg
caggccagtcccaacatcgtcattgctctcgcaggaaacaaggctgatctagcggataag
agactcgtggagtatgaggaagcacagacatatgcagaagacacaggcttgcttttcatg
gaaacctctgccaagactgcaatgaatgtaaacgagttgttcctggccattgcaaagaag
atgccaaaaacagacacccaaaaccccacgcatgctgcccgacacaggggggtaaacctg
caggacccagacgcacagtccactcgaagctgctgtgggaactaa
DBGET
integrated database retrieval system