Puntigrus tetrazona (Sumatra barb): 122351618
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Entry
122351618 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associating protein 1-like
KO
K16578
CLIP-associating protein 1/2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122351618
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptet04812
]
122351618
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122351618
Cytoskeleton proteins [BR:
ptet04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
122351618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
TOR1L1_N
HEAT_EZ
Cnd1
HEAT_2
Sec7-like_HUS
HEAT_DAAF5
Paxt-1_C
PDS5
IFRD
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
122351618
NCBI-ProteinID:
XP_043104762
LinkDB
All DBs
Position
9:12732298..12774674
Genome browser
AA seq
1644 aa
AA seq
DB search
MEPNMEYCLTQVLQKDVARRLQMGPELIDYITDADKCHDLESDQTALDKMVDGIATSWVN
SSNFKLALLGMDLLSALVTRLQDRFRHQVGTVLPSLIDRLGDAKDQVRDQDQILLLKIME
QAATPQYIWDRMLGGFKHKNNRTREGVCLCLISTLNTYGAQGLTLSKIVPHICNLLGDPT
SQVRDAAMNCLVEIYRHVGEKVRIDLSKKGLPQSRLNVIFSRFDEVQRSGNMILSSGSDK
NFDDEDSVDGGRSSSSSSSKGFSNSRRGGSMGSMRRPSSASGSRAPGKDGVSAGAVDEED
FIKAFEDVPAVQIYSSKELEDSLNKIREVLSDDKQDWEHRVTALKKVRSLLLAGATEHEG
FLQHLRLLEGAFKLSAKDLRSQVVREACITLGHLSSLLGNKFDHGAESIMPTLLNLVPNS
AKVMATSGVAAIRLILRHTHFPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTHTLE
RHVAVLTETIKKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESTYQKALQSHLK
SSDSIVSLPQSDRSSSSSQESLNRPLSVKSVVGGPVTRSKVIGSRVSSTPGALQRSRSDI
DVNAASSAKSRMSTTTSPSPFSSAAALPPGSYASLDGAPGKIDGRVRTRRQSSGSAVSAN
STVTDSRGRSRAKVVSQSQPGSRSSSPGKLLGHAYGRIPRATAPTTPSDKYSRIPRSQGC
SRETSPSRLGIARLCGKALLPATSSYRTLARSSRIPRPSMSQGCSRDTSRESSRDTSPAR
GFTPLASRRHSRSTSALSTAEPVGQSDRFGLIHQARISASVNAMRVLNTGTEVEAAVADA
LLLGDSRNKRKPLRRRYESDDDANSDASSACSERSYSSRNGGIPHYLRQTEDVAEVLNHC
ASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDF
ITVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPFDQQFNILMRFIV
DQTQTPNLKVKVAILKYIESLARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKTLH
NWACEELSGRPSTTALLPGEGHLEERCKQAAQVVLISLFELNTPEFTMLLGALPKTFQDG
ATKLLHNHLKNSSNTSSVSSPSNTMGRTPPRHPTSRTSPLTSPTNCSHGGLSPSRLWGWS
VDGLLKHPSPSPPPPTPPSHSSIPAGPSLRAFRCALSPSMLEYDTENMNSDEIFSSLRGV
TEAIQSFSYRSQEDLNEPIRRDGKKDDAVSSSETRWGKCIITPGGDQPTDSGRTVLDNKT
SLLNTMPLLSSSPRPTREYQPVSYSDSSFTSSPFNKSLKDADQDAESLTDGKALPXLFVA
ALXSAHMCGSDFLSAVGVTDSGVDQSEVVAELLKELSNHSERVEERKAALCELMRLIRET
QLHVWDEHFKTILLLLLETLGDGEHVIRALALRVLKEILNRQPWRFKNYAELTIMKTLEA
HKDPHKEVVRAAEEAAAMLATSISPDQCIKVLCPIIQSADYPINLAAIKMLTKVIDRLPK
EGLHGPCLMIFCSSLQGYDNSESSVRKACVFCLVAIYAVIGEDLKPHLSQLSGSKLKLLN
LYIKRAQSGSSGSDQSSDVGGQGL
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaatatggagtactgtctgacccaggttctacagaaggatgtggcccgcagg
ttgcagatgggtccggagctcatcgactacatcacagatgctgacaagtgtcacgacctg
gagagtgaccagactgcgctggataaaatggtggacggtatcgccacctcttgggttaac
tccagcaacttcaagctggctttgttaggaatggaccttctatctgccttagtgacgaga
ttacaggaccgatttcgtcatcaagttggtacagttttgcccagcttgatagatcgctta
ggcgacgccaaagatcaagtcagagaccaagatcaaatcctgctgctgaagatcatggag
caagcagctactcctcagtacatatgggaccgaatgttgggggggttcaaacacaaaaac
aaccggaccagagagggagtgtgtctctgtctcatctcaactctgaacacatacggtgcc
caaggcttaaccctgagcaaaattgtaccacatatatgtaatctactcggagaccccaca
agtcaggttcgggatgcggccatgaactgccttgtggaaatatacagacatgttggagag
aaggttaggattgaccttagcaaaaaaggactgccgcaatcaaggttgaatgtaattttc
agcagatttgatgaagtccaaagatctgggaacatgatcctctcctcaggttcagataag
aactttgatgacgaggactctgtggatgggggcaggtcctcctcctcttcctcttctaag
ggcttctccaacagcaggagagggggcagcatgggctcaatgagacgacccagttctgcc
tctggatccagggctccagggaaggatggtgtcagtgcaggagctgtggatgaagaggat
tttatcaaggcttttgaagatgtacctgcagttcagatatattcaagtaaggagttggag
gactctttgaataagatccgtgaagttctgtcagatgacaagcaagactgggaacaccgt
gtcactgctctgaagaaagtgcggtccctgcttctggctggagcaaccgaacacgagggt
ttccttcaacacctacggcttttagaaggtgccttcaagctgtcagctaaagatcttcgg
tctcaagtggttcgagaggcctgtatcacattagggcatctgtcttcattgctggggaat
aaatttgatcatggggctgaaagcatcatgcctacgctgctcaacttggtgcccaacagc
gccaaagttatggccacgtctggagtggcggccatccgcctcatcttgcgacatacacac
ttcccacgccttatcccgatcatcaccagcaactgcacttctaaatctgtggctgttcga
agacggtgttatgagtttttagacctgttattgcaagaatggcagacacacactctagag
aggcatgtggcggttctcactgagaccatcaagaaggggatccatgacgctgactcagag
gccagatctgtggccagaaaatgctactggggtttccacggccattacagtcgagaggca
gaacacctgtttcaggcattggaatcgacctatcagaaggccttgcagtctcacctgaag
agttctgacagtatagtgtctctaccgcagtctgaccgctcctcctcaagctcgcaggag
agcctcaatcgtcctctgtcagtgaagagtgtcgtaggaggacctgttacaagaagtaaa
gtgatcggctctagggtgtcctccacccctggtgccctccagcgctcccgcagtgacata
gacgtgaacgccgcctccagtgccaaatctcgcatgtccaccacaacttccccatctccc
ttcagctccgctgcagctctgcctccaggctcctacgcctccctggacggtgcgcctggt
aaaatagatggtcgtgtgcggacgagaaggcagagctcagggagtgcggtcagcgcaaac
agcactgttacagacagtcgtggtcgaagcagagctaaagtggtctctcagtcccagccc
ggcagtcgatccagttctccagggaagctcttgggacatgcatatggcagaattccaaga
gccactgccccaacaactccctcagacaagtactcgaggatcccaagaagccagggatgc
agccgtgagacaagccccagcagactgggcatagccaggctgtgtggtaaagctcttctt
cctgccacttcttcctatcgcacgctagcccggagcagtcgcatcccccgccccagcatg
agtcaggggtgcagccgtgacaccagtcgcgagagcagccgcgacacaagccctgctcgg
ggcttcactcctcttgcctcccgacgtcactctcgctccaccagcgcgctgtccacggcc
gaacccgtgggccagtcagatcgttttggcttgatccatcaggctcgcatttctgcatct
gtcaatgctatgagagtgctgaacactggcacagaagtggaagctgctgtggctgatgct
ttgctgttaggagactccaggaataagcgcaagcctttgagaaggaggtacgagtctgat
gatgatgcaaacagcgacgcatccagtgcctgctcagagcgttcatatagttcccgtaac
ggaggcattcctcactacctgcgtcagacagaggacgtcgctgaagtgctaaaccactgc
gccagttccaactggtcagagaggaaggagggcctgctgggtctgcagaacctgctgaag
agccagcgcattctcagccgtgtggagctcaagaggctatgtgagatcttcaccaggatg
tttgcagatcctcacagcaagagagtgtttagcatgttcttagagactctagtagatttc
atcaccgtgcacagagaggacctccaggactggctttttgtactacttactcagctgctg
aagaaaatgggagctgacctcttgggctcagtccaagctaaggtccaaaaggctctggat
gtcacaagggagtctttcccctttgaccagcagtttaacattctaatgagattcattgtt
gatcagactcaaacccccaatctgaaggttaaggtggctatcttgaaatacattgagtcc
ctggcacggcagatggaccctgcagattttgtgaactcaagtgagaccagattagccgtg
tctcgcattatcacctggaccacagaacccaagagctctgatgttagaaaaactcttcat
aactgggcatgtgaggagttgtcaggcaggcccagcactacagctctgcttcctggagag
ggtcacctggaagagaggtgcaagcaggccgcccaggtggtgctgatctcactctttgag
ctgaacacccccgagttcaccatgctgctgggcgctctgcctaaaacattccaggatgga
gccaccaagcttctgcataaccatctgaagaactcaagcaacaccagcagtgtgagttca
ccaagcaatacaatgggccgcacgccaccccggcaccccaccagcaggactagtcctctc
acctcgcccacaaattgttcccacgggggtctgtcacccagtcggttatggggttggagt
gtcgatgggctcttaaagcacccttctccctctcctcctcctcctactcctccgtctcac
tcctctattcctgccggcccctccctcagggccttccgctgcgcgctctcaccaagtatg
ctggagtatgacacagaaaacatgaattctgatgagatctttagctcgctgcgtggtgtc
actgaagccatccagagcttcagttaccgcagccaagaggacctgaatgagccaatcaga
cgcgatgggaagaaggatgatgctgtgagttcttcagaaacaagatggggaaaatgtatt
attaccccaggtggtgatcagcccacagactctggtcggacggtgctggataacaagacc
tctctgctaaatactatgccactcctctcctcgagtccccgcccaacaagggaataccag
cctgtcagctactcggactcttctttcacctcctcccctttcaataaaagcctgaaagat
gcagaccaagatgcagagtccctcactgatggtaaagcacttccatagctatttgtagct
gctttgtgaagtgcgcacatgtgtgggtctgacttcctttctgctgttggtgttacagac
agcggcgtggaccagtctgaggtggttgctgaactcctgaaagagctgtcgaatcacagc
gagcgggtagaagagaggaaagccgctctgtgtgagctaatgcggctgatcagagaaacg
caactgcatgtttgggacgagcacttcaaaaccatcctcctgctgctcctagaaacactc
ggggatggagagcatgtcattcgggcattagcgctgcgggtgctgaaggagatcttaaac
cggcagccgtggcgctttaaaaactatgcggagctcaccattatgaagaccctagaagca
cataaagacccgcacaaagaggtggtacgggctgcagaagaagcagcggctatgttggcg
acctcaataagtcccgatcagtgtattaaggtgttgtgccccatcatccagtcggctgat
taccccatcaacctagctgccatcaaaatgctcaccaaagtcattgaccggctgcccaaa
gagggtctccacggcccctgcttgatgatcttttgctcttccttgcagggttatgataac
tctgagagcagtgtacgaaaggcgtgcgtattttgccttgtggccatctatgctgtcatc
ggagaggatttgaaacctcacctcagccagctgtctggcagcaagctgaaactgttgaat
ttgtacataaagcgagctcagagcggctccagcggaagcgaccagtcttcagatgtggga
gggcagggcctgtag
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integrated database retrieval system
