Puntigrus tetrazona (Sumatra barb): 122351650
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Entry
122351650 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: E3 SUMO-protein ligase RanBP2-like
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013
Nucleocytoplasmic transport
ptet03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122351650
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122351650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122351650
03110 Chaperones and folding catalysts [BR:
ptet03110
]
122351650
04121 Ubiquitin system [BR:
ptet04121
]
122351650
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122351650
Chaperones and folding catalysts [BR:
ptet03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
122351650
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122351650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Zn_ribbon_RanBP
DUF3332
ANC1_spectrin
DUF1681
TLN1-like_RS
Mer2
Motif
Other DBs
NCBI-GeneID:
122351650
NCBI-ProteinID:
XP_043104807
LinkDB
All DBs
Position
9:859776..899379
Genome browser
AA seq
2108 aa
AA seq
DB search
MMKDCEESTAALKSFDCAMQDLKNTATNTADELAEVFTEMRAHLYLSAGTLLLKRAQEGS
QQWRTVLHLSALCYLVAYQAPRPKVKSLKSEQASHEPLELLACDRQSQAGHMLLNLSRDV
EQLLKDVVEAFGNRSGPGFLFEQLFGSQKQQQPSFICSDDIHVLHVQAPKAADLAKWDSG
AVLQHAGDLQQLAWLGLQWVLMGQSASLQDWLKQLFPRLTLETSKLDTNTPESICLLDLE
VFLCGVVFCCQTQVQERAKMESCSQLYEPRCLPLHIIKLLSSDRQREWWDAVYSLIHKRA
QPGTSAKLRLVVQHGLGTLHAREKHGLQPALLIHWAKHLSDTAERVNSYYDQKEYTGRSV
HYWKVVXPLLEKVKHKRSIPEPLQPMFMHFQSRDIQPSQVRVYEEDAIISFATLLDIEGN
TEEAIAKLEQLNSVSSNWHLAKIYQRLSEEAGNGLEETQGRCANFLQKFRKYLTKLYQAN
ADDMEKLPVSMEEVMDLLNEVNQQLEDVGEVEEDQVDYPVTSSPGQPAEGHVKFSTPSPS
KSVTSPSKRSVFSPKTPPHWVEDQKSLLQMLCQQVEALKNEVHDLRHNSSDATASSYRMY
RDNYTAEGLQETFPPAQTFHGVPLTVATTGPSVYYNQSPAYNSQYLLRTAANVTPTKGPV
YGMNRLPPPQQHMYGYQQSTHTPPLQSTPACMYPQEQVFGPPIRFESPATSLLSPYSEDY
YGHNVPQPTVNPTLPEPGYFTKPCAVSSTQPSKSTDSKPADPKINFGSQFTGEPAKVPNF
GGVAAVPTTTATATTAFKFNSNFKSNDGDFTFSSAQVKHSESLLGLLTSDIPPKAEVLSE
PKHQTQDQQSSQSGVFTFGSKTAAGFSFTDGAQNKMSIFGNADQRFGFTSGTKPISGIXE
AREEKSGESDNDSTHVEEDEDGPHFEPIVPLPDKVDVKTGEEEEEEMFCKRAKLFRFDSE
TKEWKERGIGSIKILKHKTSGKVRLLMRREQVLKICANHYITADMALKPNAGSDKSWVWY
AMDYADEMPKTEQLAIRFKTSDEAALFKVQFEEAQKFLLESLQEPQTEKKSETPQPQVSS
KEVDLKALFSKKEGEWDCEVCCVRNTPTSAVCVACSSAAPSTAPVKPVEEPKGSGPMAPP
AKLFSFGLSGDSAKNSTSTDVSSKGFTFGSQIPVSFKFGFKDAVGTSAGFGPQAEKKTVQ
ADAPQQEKVSTAPAVPFGTGFGAQFAKKEGQWDCESCLVRNDASETECVACKAPCSTVKS
NATPQGGLAAMFAKKXGQWDCDTCLVRNESSSSHCVSCQTANPNTKNKTSSASSSSFSFS
FGSSSSQPAATGFNANFNAGTAFKFGTSKEKVSSEGFKFESSTTDAEKSSGSSXFSFSMS
APVGGFKFGIADSEAKPSDEQSQNGSASDLLKNIAELHKEKEKEAAPSSSDQSVDTDSHD
NNPLFTGKPDSCSFADLAKSQGSFQFGQXDPTFKGFDGAGQQLFTGFNSGPKTDISGDQD
DDMYKTEENDDIQFEPVVQMPEKVDLVTGEEDEKILYSQRVKLFRFDTETNQWKERGVGN
LKLLKNNQNGRLRILMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKL
EQLAAKFKTPELAEEFKLKFEECQRLLLDIPLQTPHKLVNTGRTAQLIQKAEEMKSGLKD
LKSFLTYQNKDEENADTSHSTSAAVVKLNPDSTAPTLEWDNYDLREEVHEDYASSAVDNT
PSQPDPVAKXLFRFGESSTGFSFSFQPILSPSKSPSKLNQSQASVGTDDEQDVTQEEERD
GQYFEPVVPLPDLVEVSTGEENEQVLFSHRAKLYRYDKDLSQWKERGIGDLKILQNHETK
RVRLVMRRDQVLKLCANHWIASNMKLKPMKGAEKAWIWSAFDFAEGQGKVEQLAVRFKLQ
ETASAFKEIFEEAKTAQEEDKLLTPFSARIPASTQEMLCGTAAVAVLEEITKERTGLSEE
SSPKPDHTPQSTKIVVSPPKFVFGSDSVQKIFGSPSPSKEKSPVMISSSKDEDTGASRLK
TSAPAVTSQSSVGTPFSIPTSLDFRLFKNNPMAFWTCTSANQFEAQGISGHHLLWHIELS
LTGMSQET
NT seq
6327 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggactgtgaggagagcaccgctgcactcaagagtttcgactgtgcaatgcag
gatctaaagaacacggccacaaatacggccgatgagctggcggaggtgtttacggagatg
agggcgcacctgtacttgtctgccgggacactgctgctgaagagggcgcaggaagggtca
cagcagtggaggaccgtgctgcatctgtctgctctctgttatctcgtagcctatcaggct
ccgagacccaaagtcaagagcttgaagagcgagcaggcgtctcatgagcctctggagctg
ctggcctgtgatcgtcagagtcaggcgggccacatgctgctgaacctgagccgggacgtg
gagcagctgctgaaggatgtggtggaggcgttcgggaaccggagtggcccaggttttcta
tttgagcagctgttcggctctcagaagcagcagcagccctcctttatctgcagcgatgac
attcacgtcctccatgtacaggcgcccaaagctgccgatctggccaagtgggacagtgga
gcggtgctgcagcatgccggtgatctgcagcagctggcgtggctcggcctgcagtgggtg
ctcatgggtcaaagtgcgagtctgcaggactggctcaagcagctcttccctcgcctcaca
ctcgagacctccaaactggacaccaacacgccggaatccatctgcctgctggacctggag
gtgttcttgtgtggcgtggtgttctgctgtcagacacaggtgcaggagagggcaaagatg
gagtcttgctctcagctgtacgagccgcgctgtctgccgctgcacatcatcaagctgctg
tcgtctgacagacagagagagtggtgggatgccgtctacagcctgattcacaagagagcg
cagcccgggacatctgctaaactgcgtctggtcgttcagcacggtttgggcacgctgcac
gccagagagaaacatggccttcagccggctctgctcatacactgggctaaacatctcagt
gacacggctgagcgggtgaactcctactacgatcagaaggagtacactggacgtagtgtg
cactactggaaggtggtgnatcctctgctggagaaggtcaaacacaaacgcagcattcct
gagcccctccagcctatgttcatgcactttcagagcagagacatacagccttctcaggtg
cgagtgtatgaagaagatgccatcataagcttcgccacactccttgacatcgaaggcaac
accgaggaggccatcgcgaagctggagcagctcaacagcgtctcgtctaactggcatctg
gcaaagatctatcagagactgtcagaggaagcaggaaacggactcgaggagactcagggc
aggtgcgccaacttcctccagaagttcaggaaatacttgaccaagctttatcaggccaat
gcagacgatatggagaagttacctgtatctatggaggaggtgatggatttgttgaatgag
gtcaaccagcagcttgaagatgttggtgaggtggaggaagatcaggtggactatcctgtg
acatccagccccggtcagcccgctgaaggccatgttaaattctccactccttcgccatcc
aagagtgtcacctcaccgtctaaaagatctgtgttctcccccaaaacacctcctcactgg
gtggaggaccagaagtctctgctgcagatgttatgccagcaggtcgaggcattgaagaat
gaggttcatgacctgcgccataattcttcagatgcaacagcttcctcatataggatgtat
cgagacaactatactgcagaaggacttcaggaaacatttcctccagcacagacattccac
ggtgttcctctcactgttgctactacaggtccatctgtgtactacaatcagtctccagca
tataattcgcagtatcttctgcgcactgctgcaaatgtcacaccgacaaagggcccagta
tatgggatgaatcgtcttcctcctccacagcagcatatgtatggctaccaacaatcaaca
cacactccacctctccagtcaacacctgcatgcatgtatcctcaagagcaggtctttggt
cctcccatccggtttgagtcaccagctacatcattgctctccccgtacagtgaggattat
tacggtcacaatgttcctcagcccacagtcaatccaacattgccagagcctggatatttc
actaagccatgtgctgtttcatccacacagccgtccaagagcactgatagcaagcctgct
gaccccaagatcaattttggctctcagtttacaggtgaacctgctaaggttcccaacttt
ggaggagtagctgctgttccaacaacaacggcaacagcaacaactgcattcaagttcaac
tccaatttcaagtccaatgatggtgatttcaccttctcctctgctcaggtgaaacatagc
gaaagcctcttgggtcttctgacatcagatattcctcccaaagcagaggttctgtcagaa
ccaaaacatcagacccaagatcagcagtctagccagagcggagtctttacctttggcagt
aaaactgcagcaggattttcattcactgatggtgctcagaacaagatgagtatttttggc
aacgctgaccaaagatttggctttacaagtggaaccaagccgatatcaggaattncagag
gctcgggaagagaaaagtggggaaagtgacaatgatagcacccacgtggaggaggacgag
gatgggcctcattttgagcctattgtccctctacctgataaagtcgatgtgaaaactggt
gaggaggaggaagaggagatgttctgtaagagagcaaaactcttccgatttgactcagag
actaaagagtggaaagagaggggcattggtagtataaaaatccttaaacacaaaacctct
gggaaagttcgtctgttgatgaggagggaacaggttctgaaaatctgcgcaaatcactat
atcactgccgacatggccctcaaaccaaatgctggatcggacaaatcctgggtgtggtac
gctatggactatgcagatgaaatgccaaaaacggagcagttggccattcgttttaaaacg
tcagacgaggcggcactgtttaaagttcaatttgaggaagctcaaaagttccttttggaa
tccctacaagaaccgcaaactgaaaagaaaagtgaaactccacagcctcaggtttcatcc
aaagaagtggatctcaaagccctgttttccaagaaggagggtgaatgggactgtgaggtg
tgctgtgtaagaaacactcccacgtctgcagtgtgtgtggcctgcagcagtgcagctcct
tctacagcaccggtcaaacctgtagaggaacccaaaggctctggtcctatggctcctcct
gccaaattgttttcatttggactctctggagattcagctaagaactccaccagcactgat
gtcagctcgaagggcttcacgtttggatctcaaataccagtttcttttaagtttggattt
aaggatgctgttgggacatctgctggctttggacctcaggctgaaaagaaaacagttcag
gctgatgcaccacaacaagagaaagtatcaacagctccagcagtcccatttggcactgga
tttggtgctcagtttgccaagaaagagggtcagtgggactgtgagtcctgcctcgtgagg
aatgatgcctcagaaactgaatgtgttgcgtgcaaagccccctgcagcactgtaaaatct
aatgcaacaccacaaggtgggctagctgccatgtttgctaaaaagnatggacagtgggat
tgtgacacttgcctggtaagaaacgaaagctcatctagccattgtgtttcatgtcagaca
gcaaacccaaatacgaaaaacaagacctcttctgcatcgagttcctcttttagcttcagt
tttggtagttctagtagccaacctgctgcgacaggatttaatgccaatttcaatgcaggc
actgcttttaagttcggcacaagtaaggaaaaagtttcttcagaaggctttaagtttgag
tcctccacaactgatgctgaaaagtcatcaggcagttctnagttttcattttccatgtct
gcacctgttggcggatttaagtttggcattgcagattctgaggcaaaaccatcagatgaa
cagtcccaaaatgggtctgcttctgaccttctcaaaaatattgctgagcttcacaaagag
aaagaaaaagaggcagccccaagttcctcagatcagtctgtagatactgatagtcatgat
aataatcccctctttactggtaagcctgactcctgtagttttgctgacttggcaaagtca
caaggaagttttcagtttggccaanaagatcccactttcaaaggctttgatggggctggc
cagcagctctttaccgggtttaattctgggcccaagactgacatctctggtgatcaagat
gatgacatgtacaaaactgaggagaatgacgatattcagtttgaacctgttgttcagatg
ccagagaaggttgaccttgttacaggcgaagaagatgaaaaaatcttgtattcacagcgt
gtcaagctcttcagatttgatacagaaacaaaccaatggaaggaaagaggagtcggcaac
cttaagcttctcaagaataaccagaacgggagactgcgaattcttatgaggagagagcaa
gtgttgaaagtgtgtgctaatcattggataacaaccacaatgaacttaaagcccctctct
ggctcggatcgagcctggatgtggctggccagtgacttctcagatggagatgcaaaatta
gaacaacttgcagcaaaattcaagacaccagagcttgcagaagaattcaaactaaaattt
gaggagtgtcagcgactgcttttggatattcctttgcagacccctcacaagcttgtgaac
actggcagaacggcccagctcatacagaaagctgaagaaatgaaatctggtcttaaggac
ctcaaatcattcttgacttaccaaaacaaggatgaggaaaatgcagatacaagccatagt
acctctgcagctgtagtgaagctcaaccctgatagcaccgcacccactttagagtgggat
aattatgatttaagagaggaagtgcatgaggactacgctagctctgctgtggataatact
ccttcccagcctgatccagtagcaaaanatttattccgctttggtgaatcatccacaggg
tttagtttcagctttcagcctattctcagtccctctaagtctccatctaagctaaaccag
agccaggcttctgtcggtacggatgatgagcaggatgtgacgcaggaggaagagcgagat
ggtcagtactttgagcctgttgtgccactgccagatcttgtggaagtctcaacaggagag
gagaatgaacaagtcctcttcagtcaccgggctaaactataccgctacgataaagatctt
agtcagtggaaggaacgaggtataggggatcttaaaatactgcaaaaccatgaaacaaag
cgtgtcagacttgtgatgagacgggaccaggtcctcaaactgtgtgcaaaccattggatt
gcttccaatatgaagctcaagcccatgaaaggagctgagaaagcgtggatctggagtgcc
tttgattttgctgaaggacagggcaaggtggaacagctggctgttcgatttaaactgcag
gaaactgcaagtgctttcaaagaaatctttgaagaggcaaagactgcacaggaagaagac
aaactcttaaccccattttctgccagaatacctgcctccacccaggagatgctttgtggc
acagctgcagttgctgtacttgaggaaatcacaaaagaacgtactggactctctgaggaa
agcagtccaaaaccggatcatacccctcaaagcaccaagattgtggtctctcctccaaag
tttgtctttgggtcagactctgtgcagaagatctttggaagcccttctccatcaaaagag
aaatccccagttatgatttccagttcaaaagatgaggacacaggtgcctcgagactgaag
acctctgcaccagcagtgaccagtcagtcatcagttgggacacctttcagcataccaaca
agtttggattttaggcttttcaaaaataatcctatggctttttggacctgcacatcagcc
aaccagtttgaagcccaaggtatttcaggtcaccatttactgtggcatatagagctctca
ctgactggcatgagccaggagacctga
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integrated database retrieval system
