Puntigrus tetrazona (Sumatra barb): 122351817
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Entry
122351817 CDS
T08985
Symbol
rnf17
Name
(RefSeq) RING finger protein 17 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122351817 (rnf17)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122351817 (rnf17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
CYP38_PsbQ-like
zf-C3HC4_4
Mei5
zf-C3HC4_2
zf_RING_Vps8
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
122351817
NCBI-ProteinID:
XP_043105076
LinkDB
All DBs
Position
9:complement(10487697..10504466)
Genome browser
AA seq
1512 aa
AA seq
DB search
MSDTAVACNICGSSYTLPEDESGGNLPHVLVCGHIFCSTCLRALQSQQNLITCPECQMDT
SIEEGVDGLEVDSRIIGLIYTARMNTKKGRHRCKSQRFKSPPPAGAIHTQENAEGRPDVV
KVLDEFLGKATENLSQLDKLHKSFSSGIHAQLRKERTRIIREIDEAVDKAKRVLQKRRSM
LVSKLSDVDLLFTDGRKECNRMEERMKELQTAIQKARHVRQVPSLETYCNLDKILETLHI
PVDAESYDMSSVSLRSGLCCSLQMDSFVDSLRSCLKITDDDDDCFLKEVTVEPFKHVVKS
GMEVWDSSSQSVGGNADPIVKKKSTSRPSFIEEIMEDIDTSSEVVEIAHSFPEPEPRHAE
RHTMHRRHRRQRFDRPLTTQPKLVHYVMATHIVNPAHFYVRYMMEQKSGQKLTKKVNEFC
SGDSSLFTFSDEIKTGSVLFIYWKKDVWCRVTVTELFQKECFQHVPKCLASEVSRLCVYF
QDFGFSKGISIPSDGGLSVLNECLRRPDAATLAEMNGWAPLAIKCSLKDIVPADLLKGWS
LEAADEMRSLLGSEAVEMQVFGEEGDTLLVDLKKTPMVSMREHLVFMELARFYSPIVSPG
SVPLLFYPSVRPALNVEVNAMVSHANKPSDFYVQLVENMEYLLLHSKLQDCYSRPQANSE
FQIFCPSLSQACVACYDQEWCRVQVIGFPGGRMVEVRYVDFGYKKTLSVKDLRQIKDEFF
ALPEMALWCSLNDVVSPQHTWSDEACVAFKELVEHKLITVVAKKLVAGTGPVPVCLYEIG
DDCTGASIGDLLVRNGLAVSSKQCQIKDTQPLETTVWDPPFEEEPLSVALTPPVSEELNA
SLILPTCVKDIKVRVTHVTSPGNIYVQLLQFDSQLKRIHDTLKSLFSKSEPQDMLWEAEM
FCAANNTGVWERGKVCTVSANGVAEVLRCDFGNKVNLHENNLRPLSPDLIGSFLLECNLS
GVRPAGGRSTWTATACDFISHYLTGAMAVMAIKDPSARPVLVSLFCSNRAGQNVSFSDFL
ISEGLALKERKAASTSETVFSEQCVKIEKIPEPQRLTSLPQTPPTSTPHISPPPEKVQTH
SYPPPELPPCGHTLMSISAVSEQGVIYAMTHQAVCEFDRLRERLQQHIKTLPRQKNYNWK
GVLGCAVMGTDMFWYRGQVQEVIGGHVKVQYVDQGLVESIPVCHVYPMVLCEDVPQLCVP
CEINGVIPIGKGWQWDAVVLMKELLLGRSVSVHIIEHPEDPCGCVKVEITVDGMALSKIM
VHHQYATFDPAISSREDYVVPPPVPDLDDWDLNTEGLQEPQTVLGIYKELQIPKSRKHFP
ARVKHIRTPNEVFLCLLDKILGEEEQEENLEEALERVNERIENLSPLTDFPIECSCLAEY
SDGKYYRAKILGFSQLTPSVKLLVRHVDFGSDDILPTQKLRQLPTSLHHFPCAAVYVKLA
GFKPTSACSELERIPYRPEWSMRAMMEMIDLLNGELTAVVTATEPQLSVLLYNAEGTLVH
RPLVEKGLADYA
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacacagcggttgcttgtaacatctgtggctcatcttacacattacctgaagat
gaatctggggggaatctccctcatgtgctggtgtgcggtcacattttctgcagcacgtgc
ttgcgcgcgctccagtcccagcaaaacctcatcacgtgtccagaatgtcagatggacact
agtattgaagaaggagttgatggtttggaggtggacagcagaatcattggcctcatctat
acagcgaggatgaacacaaagaaaggcagacaccggtgtaaatctcagagatttaagagt
ccaccgccagcaggagccatccacacacaggagaatgctgaagggaggccagatgtcgtt
aaagttttggacgaattccttgggaaagcaacagaaaacttaagtcaacttgataaactt
cacaagtctttttccagtggtattcatgctcaactgaggaaagagagaactcgaataatc
agagaaattgatgaggctgttgacaaagcaaagagggtcctgcagaaaaggaggagtatg
ttggtgtcaaaactgagtgatgtcgatcttctcttcacggatggtcggaaagaatgtaac
agaatggaagagaggatgaaggagctgcaaacagccatccagaaagctcggcatgtccga
caggttccttctctggagacatattgcaatctagacaagattttggagacactacacatt
ccagtggatgctgaatcatatgacatgagctctgtgtcattgcgttcgggactctgctgc
agtcttcaaatggacagttttgttgacagtttgagaagctgtcttaaaattacagatgac
gatgatgactgttttttaaaagaagttacagtggagccttttaaacacgttgtgaagagt
ggtatggaggtctgggacagctccagtcagtctgttggaggaaatgcagatcccattgtc
aaaaagaaaagcacaagcaggccaagtttcatagaggaaataatggaagacattgacact
tcttcagaggtagtggaaatagcccatagtttcccagaacctgaaccaaggcatgctgaa
aggcacacaatgcatagaagacatcgcaggcagcgttttgacaggcccttaactacacag
cctaaactggtgcactatgttatggcaactcacatcgtaaaccctgcacatttctatgta
cgctatatgatggaacagaagtcaggccaaaagttgaccaaaaaggtcaatgaattttgc
tcgggagatagtagcctcttcacgttcagtgatgaaatcaagacaggctctgtgctcttt
atctattggaagaaggatgtgtggtgtagggtaacagtgactgagctctttcagaaagag
tgtttccagcatgtgcccaaatgccttgcatcagaagtctcccgtctctgtgtctacttc
caggactttggcttctccaagggcatttcaattccaagtgatggaggtttaagtgtgttg
aatgagtgtctgcggagacctgatgctgctactctggctgaaatgaatggctgggctcct
ctggccatcaaatgctcccttaaagatattgttcctgcagacctgctcaaagggtggagt
ttagaggcagctgacgagatgaggagcctgctgggatccgaggctgtggagatgcaggtg
tttggtgaggagggagacactctgttagtggatctgaaaaaaacaccaatggtgtctatg
cgggagcacctggtgttcatggagctggccagattctactctcctatagtttcccctggc
agtgtaccactcctcttctacccatcagttcgccctgcactcaatgttgaggtcaatgct
atggtttctcatgcgaacaaaccatcagacttctatgtacaactagttgaaaatatggag
tacctgctgttgcactcgaagctccaggactgttacagtcgcccccaggcaaacagtgag
tttcagatcttctgcccttctctctcacaggcctgcgtcgcttgctatgaccaggaatgg
tgcagggttcaagtcataggcttccctggtggtcggatggttgaggttcggtatgtggac
tttggctacaaaaagactctctctgtgaaggatctgagacagataaaggatgagttcttt
gctttgccagaaatggccttgtggtgcagtctgaatgatgtggtcagtccgcagcataca
tggagtgatgaagcctgtgttgcgttcaaggaacttgtggagcataaactaatcactgtt
gtggcaaaaaagcttgttgccggcactggacctgtgcctgtgtgtctgtatgagattggt
gatgattgcactggagccagtattggagatttactggtcagaaatggtcttgctgtttcc
agtaaacagtgccagattaaagacacccaacccttggagacaaccgtatgggaccctcca
tttgaagaggaacctctgtctgttgctctgactcctcctgtttctgaagagctgaatgcc
agcctgattctgcccacatgtgtcaaagacatcaaagttcgtgtgacacatgtcacctct
cctggaaacatttatgtgcagctgctgcagtttgacagccagctgaagagaatccatgac
acactgaagagtctcttctctaaatcagagccacaggacatgctctgggaagcggagatg
ttctgtgctgctaacaacactggggtttgggaaagaggaaaagtgtgcaccgtgtctgct
aatggggttgctgaggttttgcgttgtgactttggtaataaagtgaatctccatgaaaac
aacctcagacccctcagtcctgatctgattggatctttcttactggaatgtaacctcagt
ggtgtcaggccagctggtggtcgctccacatggacagccacggcctgtgacttcatctct
cactacttgaccggtgccatggctgtaatggccataaaggacccatctgccaggccagtg
ctggtgtctctgttttgttcaaaccgtgctggtcaaaacgtcagtttctcagatttcctc
atcagtgaaggacttgctctaaaggagaggaaggctgcttccacatcagagacggtcttc
tcagagcagtgtgtgaagatcgagaagattcctgagccgcagagactcacaagccttcct
cagacaccacccacatccacccctcacatcagcccaccaccagagaaagtgcagacacac
tcgtacccccctccagagctgcctccctgtggacacacactcatgagcatctcagctgtc
tccgaacaaggtgtcatttatgcaatgacgcaccaagcagtgtgtgagtttgatcgttta
cgggagcgcctgcaacaacacattaaaaccttgccaagacagaagaactacaactggaaa
ggagttttgggatgcgctgtcatgggaacagacatgttctggtacagaggtcaggtgcaa
gaggtcattggaggacacgtgaaggtccaatatgtggatcaggggcttgtggagagtatc
ccggtttgtcatgtgtatccaatggtcctctgtgaggatgtgccgcagctctgtgtgcca
tgcgagataaatggagtcataccgattgggaagggatggcagtgggacgctgtggtgctc
atgaaggagttgctacttgggcgttcagtcagtgtacacattattgagcacccagaggat
ccttgtggctgtgtaaaggttgagataacagtggatggaatggcgcttagtaagataatg
gtgcatcaccaatatgccactttcgatcctgccatcagcagccgggaggattatgtggtt
ccgcctcctgtccctgatttggatgactgggacctgaacacagaggggttgcaggagccc
cagactgttttagggatttataaagaactccagattcctaaatcaagaaagcatttccct
gcgagggtcaagcatatccgcaccccaaatgaggtgttcctgtgtttgttggataagatt
ctgggtgaagaggagcaagaggagaacttggaggaagctcttgagcgtgtgaatgagagg
atcgaaaatctgagcccgctgacagactttcccatcgagtgttcctgtctggctgagtac
agcgatggaaaatattatcgtgcaaagatactgggtttttctcaactcactccttctgtg
aagctcctcgtgagacatgtggattttggttcggatgacatcttgccaactcaaaaattg
cgtcaactccctacatcccttcatcacttcccatgtgcagcagtttatgtcaagttagca
ggcttcaaaccaacaagcgcgtgttcggagttggagaggataccttaccggcctgagtgg
agtatgagagccatgatggagatgatcgacctgttaaacggggagctcactgcagtggtc
actgctactgaaccacagctgagtgtgctgttatacaatgctgaagggacactggtccac
agacctctggtggagaaaggcctcgccgattatgcgtaa
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integrated database retrieval system
