KEGG   Puntigrus tetrazona (Sumatra barb): 122351844
Entry
122351844         CDS       T08985                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122351844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptet03041]
    122351844
   03036 Chromosome and associated proteins [BR:ptet03036]
    122351844
Spliceosome [BR:ptet03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122351844
 Complex B
    122351844
 Complex C
   U2 SnRNP specific factors
    122351844
Chromosome and associated proteins [BR:ptet03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    122351844
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Adaptin_N UNC45-central DUF2298
Other DBs
NCBI-GeneID: 122351844
NCBI-ProteinID: XP_043105136
LinkDB
Position
9:12777570..12787437
AA seq 1311 aa
MAQIAKTHDDIEAQILEIQGMKAALVEGAEQGVGLDSTGYYDQEIYGGSDSRFAGYVTSI
AANEQEDDDEEDSSTSLLGQKKPGYHAPVAILNSIPQSDEQYDPFAEHRPQKISDREDEY
KKRRQKMIISPERHDPFADGGKTPDPKMQVRTYMDVMKEQHLSKEEREIRLQMVEKAKSG
ELKAVNGSAASQAAGAKRKRRWDQTADQTPSNTTPRKVSSWDQADAGPETPGHTPSNSRW
DETPGRPKGSETPGATPSTRMWEPTPSHTPAGAATPGRDTPGHATPGHGGATSSVRKNRW
DETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWDETPASQMGSSTPLL
TPGKTPLGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDEELDAMFPEGYK
VLPPPAGYVPIRTPARKLAATPTPIGGMTGFHMQTEDRSMKQVNDQPSGNLPFLKPDDIQ
YFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFN
QILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG
REIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCK
SKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALA
EAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLIL
IREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQL
VDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLI
DGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAAD
LISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPI
KDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAI
RRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALM
NEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQ
HMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQG
LFHPARKVRDVYWKIYNSIYIGSQDALIAHYPLVYNDEKNSYVRYELEYFL
NT seq 3936 nt   +upstreamnt  +downstreamnt
atggcgcagatcgccaaaacacatgacgacattgaggctcagatcctggaaatccagggg
atgaaagctgccctggtggagggagcagagcagggggttgggctcgattccactggatat
tatgaccaagagatctacggaggcagcgatagccgctttgctggctatgtgacatcgatt
gctgccaatgagcaggaggatgatgatgaggaagattcgtccacgagtctgcttggacag
aagaaaccaggataccatgcaccggttgcaatactcaattccattcctcaatcagatgag
cagtacgatccctttgctgaacaccgaccacagaagatttcagaccgtgaggatgagtac
aagaaacgcagacaaaagatgatcatctccccagagcgtcacgacccatttgctgatggg
ggcaaaacgccggatcccaagatgcaggtcaggacatacatggatgttatgaaggagcag
catctgtccaaagaagagagagagatcaggctgcagatggtagagaaagcaaagtctgga
gagctgaaagcagtgaacggctctgctgcatctcaggctgctggggccaaacgcaaacga
cgctgggaccagacagctgaccaaacccccagtaataccacacccagaaaagtgtccagc
tgggaccaggcagatgcgggtcccgaaacaccaggacacacaccttccaacagtcgctgg
gatgagacacccgggcgccccaaaggtagcgagaccccgggagctactccaagcacccgt
atgtgggaacccacaccaagccacaccccagctggagccgcaacaccaggtcgagacact
cctggacacgccactcctggccacggaggggctacttccagtgtgcgcaagaaccgctgg
gatgaaacaccaaagacagagagagagacacctggtcatggcagtggctgggctgagact
ccacgtacagacagaggagatgagtcagtgggtgagacgcccaccccaggtgctagcaag
aggaagtcaagatgggatgagacaccagccagtcagatgggctcttcaactcctctgctc
acccctggaaaaacccctctgggcacacctgctatgaatatggccacacccactccaggt
cacctgatgagcatgactccagaacagctgcaggcttggcgctgggagcgagagattgac
gagaggaatcgtccactgactgatgaggagcttgatgccatgtttccagaaggatacaaa
gtactgccaccaccagcaggctatgtacccatccgtaccccagcacgtaaattagctgcc
acccccacccccatcggaggcatgacaggcttccacatgcaaacagaggaccgatctatg
aaacaagtcaacgatcaaccctctggaaacctgcccttcctcaagccagatgacattcag
tactttgataaactgttggtcgaagttgatgagtccaccctcagtccagaagaacagaag
gagcgcaagatcatgaagcttctcttaaagatcaagaatgggacacctcccatgagaaag
gctgccctccgtcaaatcacagacaaagccagggagtttggtgcaggaccactctttaac
cagatcctaccattgctgatgtctcctacactggaggaccaggagcgtcatctcttggtt
aaagtcattgatcgtatcctctacaaacttgatgacttggttcgaccatatgtccacaag
attcttgtggtcattgaacccttgctgattgatgaagattactacgctagagtagagggt
agagagatcatctccaacttggcaaaagctgctggtctggccactatgatctccaccatg
aggcctgatattgacaacatggacgagtatgtgagaaacacaacagctcgtgctttcgct
gttgtagcatctgccctcggcattccatctctcctgcctttcctcaaggctgtttgcaag
agcaagaaatcctggcaggctcgtcacacgggtatcaagatcgtacagcagatcgctatt
ctcatgggctgtgctatcctgccccatctccgcagcttggtggagattattgagcatggt
ctcgtggatgagcagcagaaagtgcgaaccattagtgctctggctatcgctgccctggct
gaagctgctacaccatatggtatcgagtcctttgattctgtactaaaacctctctggaaa
ggtatcaggcaacacagaggcaagggtcttgctgccttcttgaaagccattggatacttg
attcctcttatggatgctgaatatgccaactattacaccagagaagtgatgcttatcctt
attcgagagttccagtcacctgatgaggaaatgaagaagattgtcctcaaggtggtgaag
cagtgctgtggcacagatggtgtggaagccaattacattaaaacagagattttgcccccc
tttttcaaacatttctggcagcaccgaatggcattggataggcgcaactacagacagtta
gtggacactacagtggagctggccaataaggtcggggcagctgagattatttcccgcatc
gtggatgatttaaaggatgaagctgagcagtacagaaaaatggtcatggagactattgag
aaaattatgggaaaccttggtgccgctgacatcgatcacaaactggaggagcagcttatt
gatggaatcctgtacgcttttcaggaacagaccactgaagactctgtgatgctaaatggc
ttcggtacggtggtaaatgctctgggtaagagagtaaaaccgtacttgcctcagatctgc
ggtacagtgctgtggcgtctcaacaacaaatccgccaaagtccgtcaacaggctgctgac
ctgatttctcgcacagcggtggtcatgaagacatgccaggaggaaaagctgatgggccat
ttgggtgtggtgttatacgagtatctgggagaagaatacccagaagtgctgggtagcatt
cttggagcccttaaagctattgtcaatgttattggtatgcacaagatgacaccacctatc
aaagacttgcttccacgattgactcccatcttaaagaacagacatgagaaggtgcaggag
aactgcattgatctagtgggcagaatcgctgataggggtgcagagtatgtgtctgccagg
gaatggatgcgcatctgttttgaattgctggagttgttgaaagcccacaagaaggccatt
cgcagagctactgtcaatactttcggctacatcgccaaggccattggtcctcacgatgtg
ctggccacgctgctcaacaatctgaaggttcaggagcgtcagaaccgtgtgtgcacaacg
gtagccattgctatcgtggctgagacgtgttcgccattcaccgtgcttcctgcgttgatg
aacgaataccgtgttcctgaacttaatgttcagaatggtgtcctaaagtctttgtccttc
ctgttcgagtacattggtgaaatgggtaaagattatatctatgcggtcacacctttgttg
gaggatgctctgatggacagggatcttgtacacaggcagactgccagtgctgtggtgcag
catatgtctctgggagtgtatggctttggctgtgaagattctctcaatcatttgctcaac
tatgtttggccaaatgtctttgaaacgtctcctcacgtcatccaggctgtcatgggggcc
ctagagggtctgcgggtagcaatcgggccctgccggatgctgcagtactgcttgcagggg
ttgttccatcctgctcgtaaagtgcgtgacgtgtactggaagatctacaactccatctac
attggctcccaggatgcactgatcgcacattatccgcttgtctacaatgatgagaagaac
tcgtatgttcgctatgagctggagtacttcctgtga

DBGET integrated database retrieval system