Puntigrus tetrazona (Sumatra barb): 122351956
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Entry
122351956 CDS
T08985
Symbol
snx4
Name
(RefSeq) sorting nexin-4
KO
K17919
sorting nexin-4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122351956 (snx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122351956 (snx4)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
122351956 (snx4)
Membrane trafficking [BR:
ptet04131
]
SNARE
SNARE associated proteins
Others
122351956 (snx4)
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
122351956 (snx4)
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
122351956 (snx4)
Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122351956 (snx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
DUF702
Motif
Other DBs
NCBI-GeneID:
122351956
NCBI-ProteinID:
XP_043105333
LinkDB
All DBs
Position
9:18721173..18733013
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AA seq
434 aa
AA seq
DB search
MADSGSEDIAVIGNTDLTPSESENNLKNTMVEKGTNLLKKMEISVAEAEKRTGKNAVNMQ
ETYTVYLIETRPVDAASEGTNPVPDSLWRRYSEFELLRNYLLVTYPFLVVPPLPEKRAEF
VWHKLSADNMDPDFVERRRVGLENFLLRVASHPVLSSDKIFYSFLTEENGWKETVFDTGF
QAKADSRLKALNATFRVKNPDKRFAEMKHYGDELQSVISQLLRVRARAADRLYGVYKVHG
NYGRVFSEWSAIEKEMGDGLQSAGHHMDAYAASVDDILEEEEHYADQLKEYLFYADALRA
VCRKHELTQYELEMAAQDLTSKKQQREELATGTIRTFSLKGMTSKLFGQETPEQREAKLK
MLETQIEEGEELVKERNTECEEFVKSAWVDIERFKEQKDHDLREALISYAIMQISMCKKG
IQVWNNAKECFSKM
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcaggaagcgaggacatagcggtgattggaaacacagatctgactccttca
gagtcggaaaacaacttaaagaacacgatggttgaaaaggggacaaatcttttgaagaag
atggagatcagtgtggctgaagcagagaagaggactgggaagaatgccgtcaacatgcag
gagacgtatacagtgtatcttatagagacaaggccagtagatgctgcatctgaagggacc
aatcctgtcccagattcactttggaggcgttacagcgagtttgagctcctcagaaactat
ttattagttacctatccatttctggtcgttccaccattgcctgaaaaacgggctgaattt
gtttggcacaaactgtcagcagacaacatggatcctgactttgtggagaggcgtagagtg
ggactagagaacttcttgcttcgagttgcctcacatccagttctgtccagtgacaagatc
ttctattcgttcctcactgaggaaaatggttggaaggaaaccgtgtttgacacgggattt
caagcgaaggccgattcaagattaaaggctttaaatgccactttcagagtgaagaatcca
gacaagcgatttgcagaaatgaaacattatggtgatgagctgcagtctgttatttcgcag
ctgctgagagttcgggcgagagcagctgatcgcctgtatggagtctacaaagtgcatgga
aattatggaagagtctttagcgagtggagtgccattgagaaagagatgggagatgggctg
cagagcgccggccatcacatggacgcgtatgctgcttctgtagatgatattctagaggaa
gaggagcattatgctgatcaactgaaggagtaccttttctatgcagatgcattaagggca
gtgtgtaggaagcatgaactgacacagtatgaactagagatggccgcccaggatctgacc
tctaagaaacagcagcgggaggaactcgccacagggacgatacggaccttctccctaaag
ggaatgaccagtaaactatttggacaagagactccagagcagagagaggccaagctgaaa
atgctggagacacagattgaagaaggagaggaactggtcaaagaaagaaacacagaatgc
gaggagtttgtgaaaagtgcttgggtggacattgagaggtttaaagagcagaaagaccat
gatctcagagaggctctcatcagctatgccatcatgcagatcagcatgtgcaagaaagga
attcaagtgtggaacaacgctaaagagtgcttcagtaagatgtga
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