Puntigrus tetrazona (Sumatra barb): 122351972
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Entry
122351972 CDS
T08985
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
KO
K23455
collagen type VIII alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
122351972
NCBI-ProteinID:
XP_043105355
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Position
9:complement(10239297..10247492)
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AA seq
713 aa
AA seq
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MDMASFLVALVHLALLPSALGGAYYGHKPHPQQHQPLPQMPHMGMGKDMSHMPYPHYRKD
LPMHLNKGKDIKGETIPRGEQGVQGEIGPQGPPGSPGPQGPPGPQGIGIQGPLGKPGPPG
PPGFPGVGKPGMPGMPGKPGGIGQPGQQGEQGPRGEEGQPGMIGPSGPPGPPGLPGIGKP
GGQGLPGQPGAKGEPGHKGFPGLPGLPGPKGDRGIGQQGPQGPKGPIGPPGPPGQAGLPG
IGKTGLPGVAGPPGIPGKPGDPGEPGPEGPPGGQGLQGPQGTPGIGVPGEKGLPGQPGTP
GHKGLQGPPGLPGKPGLPGFGKPGYPGPKGDKGMGGLPGPQGPKGDKGYAGQPGMMGPPG
QTGPLGPPGPMGAPGGIGSPGLKGEGGAEGAKGDPGPMGQPGPPGFPGQPGLQGEDGEPG
LRGPPGSIGPKGEGGSRGLPGTPGPSGLPGLKGEPGQPGLEGPQGPKGIPGLAGPGGPIG
PPGPSGPKGEAGSPGQAGPPGEGIAGIPGSVGPAGPPGPNGSPGQRGLPGPPGPPGPPGP
PPSPDLMGVLPEMGPAIDGIKTGGYKKGKYAGGGDIMGANGLEMPAFTAQLTTPFPPVGT
PIVLDKLLYNGRQNYNPQTGVFTCELPGIYYFAYHVHCKGANVWVGLYRNGEPLMYTYDE
YKKGYLDQASGSAVIPLQPGDTVYLQLPSDQAAGFYAGQYVHSSFSGFLLYPM
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggacatggcttctttcctagtagctttggtgcatttggctctgttaccatcagcgttg
ggaggtgcatattatggacacaaaccacatcctcaacaacatcaacccttaccacagatg
cctcacatgggcatgggaaaggatatgtcacacatgccatatccacattacagaaaagac
cttccgatgcacctaaacaaaggcaaagatatcaaaggtgagacaattcccagaggtgag
cagggtgttcaaggagagattggaccgcaagggcctcctggttcacctgggccccaagga
cctcctgggcctcaaggtattggtattcaaggccctcttggaaagccaggacctcctggc
cctccaggatttcctggagttggtaaaccaggaatgccaggtatgcccgggaagccaggg
ggtattgggcagcctggacagcaaggtgaacagggacccagaggtgaagagggacaacca
ggcatgattgggccatctggccctcctggaccccccggcctgccaggaataggaaagcct
ggtggacaaggattaccaggacagccaggggcaaagggagagccaggacataaaggtttt
cctggtctcccagggttacctggccctaaaggagacagaggaattgggcaacaaggccca
caagggccaaaaggtccgattgggccacctggccccccagggcaagcaggattaccgggg
attggtaagactggtcttcctggtgtagcaggtccccctggtataccaggaaaacctgga
gatcctggggagccaggtccagagggtccgcctggtggacaaggcctacaaggaccacag
ggaacccctggcattggagttccaggagaaaaaggattaccaggacagccaggtacaccc
ggccacaaaggattacaaggaccaccagggttgcctgggaaacctggattacctggattt
ggcaaacctggataccctggcccaaagggtgacaaagggatgggagggcttcctggtcct
cagggaccaaaaggagacaaaggttatgctggtcaaccaggcatgatgggtccccccggc
caaaccggtcctctggggcctccaggaccaatgggggcaccaggaggaattggttcccca
ggtctaaaaggagagggaggagcagaaggagctaagggagatcctggaccaatggggcaa
ccaggccctcctggatttcctggtcaaccaggcctccaaggtgaagatggagaacctggg
ctaagaggaccaccaggatccataggtcctaaaggagaaggaggaagcagaggtctacct
ggtacacccggtccatcaggcttgcctggtcttaaaggagaacctggtcagcctggcctc
gaaggaccacagggtcctaaaggtattccaggacttgcaggtccaggaggaccaattggg
cctcctggaccttctgggccaaagggagaagcaggttcaccaggtcaagctggtccaccc
ggtgaaggcattgctggaatccctggttctgttggtccagcaggtccacctggccctaat
ggatccccaggtcagcgaggtctcccaggtccaccgggtcctcctggacctccaggaccc
ccaccttctccagacctgatgggtgttctccctgagatgggccctgccatagatggtata
aaaactggtgggtacaagaaagggaagtatgcaggtgggggtgacattatgggtgccaat
ggtctagagatgcctgctttcactgcccagctgaccacaccattccctccagttggcact
ccgattgtgcttgacaaattgctgtacaatgggcgtcagaattacaaccctcagaccggt
gtgttcacctgtgaactcccaggcatctactattttgcctatcatgtgcattgcaagggt
gcaaatgtatgggttgggctctacaggaatggggagccacttatgtatacatatgatgag
tacaagaagggatacctggatcaagcatctgggagtgctgtgattccattacaaccagga
gacacagtttatttacagttaccatctgaccaggcagctggattttatgcaggacagtat
gtccactcctcattctctggctttttactgtacccaatgtag
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