Puntigrus tetrazona (Sumatra barb): 122352130
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Entry
122352130 CDS
T08985
Symbol
aff3
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122352130 (aff3)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122352130 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
122352130
NCBI-ProteinID:
XP_043105608
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All DBs
Position
9:14430763..14447802
Genome browser
AA seq
1232 aa
AA seq
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MPTIYGSKGKLASVCFMLQHASQDMTQSWPYQQPPGEGGTQHFLYSHSKEGKQPNSRHRH
VRDGVSMRMPSRPLVAPHKSMLADDLKLSSDEDDKDEQSEQTTSWTDNDRLSGQQQHHAH
THVGRVRHSSSGSSGSDPSSEWESDHSQRSRTPSPGTHNRCRTPTQQRTLNCSTETESPP
STQWQLDKWLEKVPKSHQSSDHDPGGRQRRTAKSDCGRGPSPGRYWSRDFESRQDYSPCE
SPVPSPKFDYSPRNSPRPSPEYSPCPSPGISLVPSPVPSVCPSPGDSFQGSRSPSPLPLQ
PPRSPSPSLSSTAVSSQGTYPQVQPPQQESPRHIARPTVASNPAHRPKVRPWVPTNHSTD
QRKEYRHKDSTSRDSRSKDSRPGPPLQPHHSEHCPTEKSHKDLTHKLEAKNSESTSKQRF
NSPSNSISKHSSKQRPSVCPKPQAKHSSTTDHSIEHNHRSNELAGVSVHSSHSKSGHLSH
FNTLKSSDRGPSSKSRSEVNSRSSHSSKTKSFPDTKQSSSKPPFQKSSSPKPKVKLGDVP
VARSGHSQKDPKQKEREREVESHGKAQGATLVQTGKEQRQRRLAEEQVIRRRWVRSSEEE
EDEEDRRTAEGERERKRRRREQEIEWKEVQPKQRPHTNSKHHVQKEYNGHNLEEQRRKKR
RWSNEGISSGPHVTETSPSPPLSPPSPTPVIKPTRQSSSSSSSSSSSSSSSSSSSDSESE
FSPPRNVAKVPADSTSNQKTASKRRLDKQGSGTGAHPQGSSLNTPESDKQGRGRHKLYTL
VPFGRTEKSPTVAHRGLRKLVVRIDLSLLGRVPSADEIPERQSSSSALSTGKAKEKTSMK
HLQQLDKLPGDGRSKRKAENGDAQRENKRNHSRADRLPASVHNETEETLNKQNGCQEDYF
YSKRPVSPLSPPSGILELSKPSVKAQNAEKYLTPPEKDKDSTPQKTQDQKMQPKIEVECV
GVSGHXQSLSGSLVPPSNLPLHYRGTVPISDVSHHAEYYMHEAKRLKHRADAMVDKLGKA
VNYVDAALSFMECGKAMEEGPLESKSPYTMYAETVELIRYAMRLKSHAGPGASQEDKQLA
VLCFRCLALLYWQMFRLKKDNXLKYSKVLLDYFKSSPKGPHKPPPWNNAGKGTASICSVN
IMGSHTGSSQSSVISIPHRIHQMAANHLNITNSVLYSYEYWEVADTMAKENKEFFNYLNT
LTGPLTLHSSMAHIVQYTRQGLQWIRISANLS
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccatttatggaagtaagggaaaacttgcaagtgtttgtttcatgcttcagcac
gcgtcccaggacatgacccagtcctggccttaccagcagcccccaggggaagggggcact
cagcatttcctgtactcgcactcaaaggagggaaagcagcccaattcacgacacagacat
gtgagggatggtgtctctatgaggatgccctcacgtccactcgtggcccctcataaatcc
atgctcgccgatgacttgaagctcagcagtgacgaagatgacaaggacgagcaaagtgag
caaacaacttcctggactgataatgaccgcttgtcaggccagcagcagcaccatgcacac
acacatgtaggaagagtgagacattctagctcagggtcttcaggatcagacccctccagt
gagtgggaaagcgatcacagccagcgatcacgcaccccgagcccagggacgcacaaccgg
tgcaggacgccgacccagcagcggaccctaaactgcagcacagagacggagagtccacca
tccacacagtggcagctagacaaatggcttgagaaagtgcctaaaagtcatcagtcatct
gaccacgacccaggtggaagacagcggcggactgctaaatctgactgtggccgaggacca
tcacctggaagatactggagcagagactttgaatccagacaggattatagtccatgtgaa
agtcctgttccaagtccaaaatttgactacagccccagaaacagtcctcgccccagccca
gaatatagtccatgccctagtccaggaattagccttgttccaagcccagtgccaagtgtg
tgcccaagtccaggagacagcttccaagggagtcgaagtcccagccctttacctttacaa
cctcccagaagccccagtccaagtctctcatccactgcagtgtctagccaaggtacatat
cctcaggtccagccacctcaacaagaaagtcccaggcatattgcacggccaaccgttgcc
tctaatccagcacatcgtcccaaagtaaggccatgggtgcctacgaaccatagtaccgac
cagagaaaggagtatagacacaaagactctacatccagagactctcgatccaaagactcc
agacctggtcctcccctacaaccccatcattctgagcactgcccaacagaaaagtcacac
aaagatctcacacacaagcttgaagccaaaaactcagaatccacaagcaagcaaaggttt
aactcaccttcgaactccatttcaaagcattcgtcaaagcaaagaccaagcgtttgccca
aaaccacaagccaagcactcatctacaactgaccatagtattgaacataaccacagaagc
aatgaacttgcaggagtgtcagtccacagttcacactccaagtcaggccatttgtctcat
tttaatactctaaagagttccgaccgtggtccctcttcaaagtcccgaagcgaagtcaac
agtcgatctagtcacagctcaaagactaaatctttcccagatacaaagcagtccagctct
aaaccgcctttccaaaagagttccagcccaaagcccaaggtcaaactaggggacgtccca
gtggccagaagtgggcattcccaaaaagacccaaagcagaaagagagagagcgagaggta
gagagccacggtaaggcacagggagcaactcttgtgcagaccggcaaggagcagagacaa
agaagactggcggaggagcaagtgataaggcgtcgctgggttcggagttctgaggaagag
gaagacgaggaagataggagaacagcagaaggggaaagggaaagaaaacggaggaggaga
gagcaggaaattgaatggaaggaagtgcagcccaagcaaagacctcacaccaacagcaag
catcacgttcaaaaggagtacaatggacacaaccttgaggagcaaagaaggaagaagaga
aggtggagcaatgagggcatttcctcaggtcctcatgtgactgaaactagcccttctcct
ccactttctccaccttcccctactcctgtcatcaagcccactcgacaatcatcttcctcg
tcctcatcctcctcatcatcctcatcctcttcatcatcttcctctgattcagagtctgag
ttcagtccaccccggaatgttgcaaaagtccctgcagattcaacatcaaaccaaaaaact
gcatcaaaaaggaggcttgacaaacagggttcaggcactggtgctcacccacaggggtcg
agcttaaacacccctgagtcagataaacaaggtcggggcagacacaaactctacacattg
gtgccttttggccgaactgaaaagtctcccactgttgcacatcgaggcctgagaaaactt
gttgtgagaatagacctctcacttctgggtagagttcctagcgcagatgagattccagag
agacagtcctcgtcttcagctttgtcaacgggaaaggcaaaagaaaagacatcgatgaaa
cacttgcagcaattggacaaactgcctggagatggcagaagtaaaagaaaagctgaaaat
ggagatgctcaaagagagaataagagaaatcactctcgtgcagatagactaccggcgtca
gttcataatgagactgaggaaaccctcaacaagcaaaatggatgtcaggaagattatttt
tattccaaaaggccagtatccccactgtctcctccatccggcatactggagctctcaaaa
ccctcagtaaaagctcagaatgcagagaagtacctaacacctccagaaaaagacaaagat
tcaacaccacagaaaacgcaggatcagaaaatgcagcccaagatagaggtggaatgtgtt
ggggtgtcaggacacnctcaatctctctctggatcgctggttcctccctcaaaccttcca
cttcactacagaggaaccgtacctatcagtgatgtctctcatcatgctgagtactacatg
catgaggccaagaggttgaaacatcgagcagacgctatggtagataagctaggaaaagct
gtgaattatgtggacgctgctttgtccttcatggagtgtggtaaagccatggaagaggga
ccgctggagtccaagtccccttataccatgtatgctgaaactgtggagctcataagatat
gctatgagacttaagagtcacgccggccctggagccagtcaggaagacaagcagctggct
gtactatgtttccgctgtcttgctcttctttattggcaaatgtttagacttaaaaaggac
aacngcctaaaatactccaaagtcctactggactacttcaagagctctccaaaaggacct
cacaaaccccctccttggaacaatgctggaaagggaactgcctctatttgctctgtcaat
ataatgggatctcacacaggcagctcacagagcagtgtcatcagcattccccatcgcatc
caccagatggcagcaaatcaccttaacattaccaacagtgtcctgtacagttatgagtac
tgggaggtggctgataccatggccaaagaaaataaagaatttttcaactatctgaacaca
ctgactgggcccttgactctacatagcagcatggcccatatcgtccagtacaccaggcaa
gggctgcagtggatccggataagtgctaatctatcataa
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