Puntigrus tetrazona (Sumatra barb): 122352167
Help
Entry
122352167 CDS
T08985
Symbol
mcf2lb
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122352167 (mcf2lb)
Membrane trafficking [BR:
ptet04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122352167 (mcf2lb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
KCNQC3-Ank-G_bd
Motif
Other DBs
NCBI-GeneID:
122352167
NCBI-ProteinID:
XP_043105675
LinkDB
All DBs
Position
9:complement(10462995..10479085)
Genome browser
AA seq
1095 aa
AA seq
DB search
MDVQNEGKTVCISLAEAEKYYRFSRRCHWLQNEIMQKESSPLYAADIITELKRQFAFLSG
GRGQDGSPIIIFPEFPSFCEIGDQDFRNVLTYLTSIPSLSAAGVGFIVVIDRRRDRWTCL
KGTLLRISGWFPGNLRLVLVLRPSAILQRTLSDVFFKLHKDDFKVPVIMLSSLADLHSYI
ERSQLTQELGGSQYYCHKTWISHRTDLESFAALVKRMAERLQVFGRELAETELPNNLLTA
SNLLHAQTSRKDGFKEEMAGALSQGRNLLENIREPVRRDPDSSLNPDQLENLATVHRLLS
QLNESSTAFDEFWIQHENKLNQSLKLCQFEHNFQQLQTELEQTTDALNCFSDVGISSSQT
EHLLQELTNHEKKACEVLDRVRSVVAEGQHLIDSSQNVDNTVAVKCSELQRVRENLNQEL
KDKRTMLTQAMELHRRLEMVCKWCDDGIYMLASQPLDKCQSQEGAESALSELECYLETAN
EKQQWEISTVWLEYENILNNELREQVKRAFEKKASLQEMFERRRVSLKKLAAKQTRPVQP
VAPRPESLSSPAHREHENICISEDSDSRVSCKQVNSDQVDRSSRNSSVSEEEETLAVLRR
HVMNELLETERAYVEELMCVLQGYAAEMDNPSMAPLIPAALQNKKDVLFGNMQEIYNFHK
RIFLKELETYTDCPELVGRCFLDWMGELQIYEKYCHNKPRSESLWRQCSDCAFFQECQKK
LEHKLGLDSYLLKPVQRITKYQLLLKEMIKYSKGCEGSVELQAALSSILGILKAVNDSMH
LIAITGYEGNLGDLGRLLMQGSFSVWAEHKRGHVKVMELARFKPMQRHLFLHEKALLFCK
RREESGEGYEKAPSYSFKQELSMAAIGITEHAKGDSKKFEIWSSSRDEVYTVQAVSEEVK
TIWVTEIRKLLTGQLEACKEASQQRAPEQFSSDGSSTNRLVRNERSNLRNGGVEKPKADE
ERDKELENILEPRTTGRAKGSSFSFETKPKRQDIRSDPTPLETGPHPNMGGVRWFSTSSL
FQNRRRGTHTEYTRWTKGSLSLDASVEHDGYFSAEEQVTSDPEEEKEDKMCADELQSARI
EEEIQCPEETEDPEK
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacagaatgaagggaaaacagtttgcatttctctagcagaggctgagaaatat
taccgcttttccagacgttgccactggctccaaaatgagatcatgcagaaggagtctagt
cctctctacgctgctgacatcatcactgagctcaagagacagtttgcgttcctgtctggg
ggaagaggacaggacgggagccctattattatctttccagagttcccttcgttttgtgaa
attggtgaccaggattttcgcaatgtccttacgtacctgacaagtattcccagtctgagt
gcagcgggtgtgggcttcatcgtagtgattgaccggcgtagagatcgatggacgtgttta
aaggggacattactgcgcatctctggctggtttccaggtaatcttcggcttgttctggtg
ctgagacccagtgctatcctgcagcgaactctgtctgatgtgttcttcaaacttcacaaa
gacgactttaaagtgccagttataatgctaagctcactggccgatctgcactcttatatt
gagcggagtcaactgacacaagagctgggtggctctcaatactactgtcacaagacctgg
atttctcatcgcacagatcttgaaagctttgctgctttagtgaagaggatggctgagaga
ctgcaagtgttcggcagggagctggcagaaacggagctccccaacaacctcctaacagcc
agcaatctgctccatgcacaaaccagcagaaaagacggtttcaaggaagagatggcagga
gctcttagccaaggacgcaatctcttggagaacatcagggaaccggtccgcagagatccg
gacagcagtctaaaccctgatcaactggagaaccttgctacagtgcacaggctgttatcc
cagttaaacgagagctccacggcgtttgatgagttctggattcagcatgaaaataaactg
aatcagtctttgaaactctgccagttcgagcacaactttcaacagttgcaaacggagctg
gagcagacgacagatgcactgaattgtttctcagacgttggaataagctcttcccaaaca
gaacacctccttcaagagctgaccaatcatgagaagaaggcctgtgaagtgcttgacaga
gtaaggtctgtggttgctgagggacagcatttgattgacagctctcagaatgttgacaac
actgttgcggtgaaatgcagtgagctacagagagtcagggagaatctcaaccaagagctc
aaagacaagaggaccatgctgacgcaggctatggagctacacagaagattggaaatggtg
tgtaaatggtgtgatgatgggatttacatgctagcgtcacagcctcttgacaagtgccag
tcacaggagggggcggagtcagcactgtcagagctggagtgttacctggagacagccaat
gagaaacagcagtgggagatcagcacagtttggctggaatatgagaacatactgaacaat
gagctcagggaacaagtaaagcgtgcatttgagaagaaagcctcactacaggagatgttt
gagaggaggagggttagtctgaagaaactagcagccaaacaaacacgaccagtccaacct
gtggccccacgaccagagtcactctcatctcctgctcacagggaacatgagaacatctgt
attagtgaggactcagacagcagggtgtcttgtaaacaagtaaactctgatcaagttgac
aggagcagtcgcaattcttctgtatctgaggaggaggaaaccctggctgtgctgcgcaga
catgttatgaacgagctactggaaacagaaagagcatatgtggaagagcttatgtgtgtt
ttgcagggatatgctgcggagatggacaacccctccatggctcctctcatccctgcagcc
ctgcagaacaaaaaggatgtgttatttgggaacatgcaggaaatttataatttccacaaa
agaatattcctcaaagagctggaaacgtacactgattgccctgagcttgtgggacgctgc
tttctggactggatgggggagctgcagatttatgagaaatactgtcacaacaagcctcgt
tctgagagcctctggaggcagtgctcagactgtgccttcttccaggagtgtcagaagaaa
cttgagcacaaactcggactggactcatacttactgaagcctgttcagaggatcactaaa
tatcaactcctgctgaaggagatgattaagtacagtaaaggctgtgagggctcagtggag
ctgcaggcagctctttcgtccatactgggtattctgaaggctgtaaatgactcaatgcac
ctcatagccatcacaggatatgagggtaaccttggagacctgggtcgcctgctgatgcag
gggtcattcagtgtgtgggcggagcataagagaggtcacgtgaaggtgatggagcttgcc
aggtttaagcccatgcagagacacctgttcctgcacgagaaagctctgctcttctgcaag
agaagagaggagagcggtgagggatacgagaaagctccctcatacagcttcaaacaggag
ctcagcatggctgctattggaataacagagcatgctaaaggggacagcaagaagtttgag
atctggtccagttcaagagatgaggtctacacagtacaggccgtgtctgaggaggttaag
accatctgggtaacagaaatccggaaacttctaacaggacagctagaggcctgcaaagag
gcaagtcaacagagggcacctgagcagttctcctcagatggcagctcaactaacagactg
gtgagaaatgaacgtagcaacctcaggaatggaggagtggagaaaccaaaggcagacgag
gaaagagacaaagaacttgagaacattctagagcccagaacaacagggagagcaaagggg
tcttcgttcagttttgagacaaaaccaaaacgacaggatatccggagtgaccctacacct
ctagaaacagggccacaccctaacatgggcggagtcaggtggttcagtacatcaagcctg
tttcaaaatcgtaggagaggtacacatactgagtacacacgttggactaaaggatctctc
tcgctggatgcctctgtggagcatgatggatactttagtgcagaggagcaggtgacctct
gacccagaagaggagaaggaagataaaatgtgtgcagatgagctgcagtctgcaaggata
gaggaagaaatccagtgtcctgaagagacggaggatcctgagaaatga
DBGET
integrated database retrieval system
