Puntigrus tetrazona (Sumatra barb): 122352179
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Entry
122352179 CDS
T08985
Symbol
hnrnpa3
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122352179 (hnrnpa3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122352179 (hnrnpa3)
03041 Spliceosome [BR:
ptet03041
]
122352179 (hnrnpa3)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122352179 (hnrnpa3)
mRNA cycle factors
Common to processing body (P body) and stress granule
122352179 (hnrnpa3)
Spliceosome [BR:
ptet03041
]
Common components
Common spliceosomal components
hnRNP proteins
122352179 (hnrnpa3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
122352179
NCBI-ProteinID:
XP_043105696
LinkDB
All DBs
Position
9:4547501..4555749
Genome browser
AA seq
349 aa
AA seq
DB search
MEGRDSKEPEQLRKLFIGGLSFETTEDSLRAHFEQWGKLTDCVVMRDPVNKRSRGFGFVT
YSCVAEVDAAMAARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHI
REYFEPYGKIETIDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHTINSHNCEVRKAL
PKQEMQAVSNQRYRGGGGSGGNFMGRGGGGGGGNFGGGDFGRGGYGGGRGGYGGDGYNGF
GGNYGGGPGYGGGREGYGGGPGYGNQGGGGFGGYDNYSDGGNFGGNLGGGCGGGGGGGGG
NYNDFGNYAGQQSNYGPMKGNNFGGRNSGPYGGGYGSGGGGGGYGSRRY
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcgtgacagtaaggagccggagcagctcaggaagctgtttattggtggactc
agttttgagaccacggaggacagtttgcgagctcactttgagcaatggggcaagctcact
gactgtgtggtcatgagagatccagttaacaagcgctcacgaggttttggcttcgtgacg
tattcctgcgtagcggaggttgatgctgccatggcggcgcggccacacaaagtggacggt
cgggtcgttgagcccaaacgggccgtttccagagaggactctaataaacctggagcccac
ctgacagtgaagaagatctttgtgggtggaataaaggaggacacagaggagtatcatatc
agggagtacttcgagccctatgggaagatcgagactatcgatataatggaggagcgttca
actgggaaaaagagagggttctgcttcgtcacctttgatgatcatgatactgtggataaa
attgttgcgcaaaaatatcacacaatcaactcgcataactgtgaagtaagaaaagcccta
ccaaagcaggagatgcaagcggtttctaatcaaagatatcgcggcggaggaggaagtgga
ggtaatttcatgggcagaggaggaggaggaggaggaggaaactttggaggtggcgacttc
ggccgaggagggtatggaggaggccggggtggctatggaggagatggatacaacggattt
ggtggtaactacggcgggggtcccggctacggagggggtcgtgaggggtacggtggagga
cctggatacggtaaccaaggcggaggaggctttggtggatatgataactacagcgacgga
ggaaattttggaggtaacctcggtggtggttgtggtggaggtggtggcggaggaggagga
aattacaacgatttcgggaattacgcaggacagcagtctaactacggccccatgaaggga
aacaactttggaggaagaaactcaggaccttacggaggtggatacggctctggcggcggc
ggcgggggctatgggtccaggagatattaa
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