Puntigrus tetrazona (Sumatra barb): 122352454
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Entry
122352454 CDS
T08985
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4
KO
K22991
WD repeat-containing protein 45
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122352454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122352454
Membrane trafficking [BR:
ptet04131
]
Autophagy
Other autophagy associated proteins
Others
122352454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RSE1_2nd
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT80_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
122352454
NCBI-ProteinID:
XP_043105796
LinkDB
All DBs
Position
10:complement(16438320..16442017)
Genome browser
AA seq
358 aa
AA seq
DB search
MAQQRGVNSLQFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSIALCSMLHRSNL
LAVVGGGINPKFSEISVLIWDDAREVRDPKDKLVLEFTFTKPVLAVRMRHDKIIIILKNR
IYVYSFPDNPVKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLSNTKPGTS
SAPFTINAHQSEIACLALNQPGSVVASASRKGTLIRLFDTTTRDKLVELRRGTDPATLYC
INFSHDSSFLCASSDKGTVHIFALKDTKLNRRSALARVGKVGPVIGQYVDSQWSLANFTV
PAECACICAFGKNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDDF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcccaacagagaggagtaaacagccttcagttcaaccaggaccagagttgtttctgc
tgtgcaatggaaacaggtgttcgcatttacaacgtggaacctttaatggaaaagggccat
ttagatcacgagcaggtgggcagcattgctctgtgttcaatgcttcatcgatcaaacctc
ttggccgtggtgggaggcggcatcaaccctaaattctccgaaatctcagtattaatttgg
gatgatgctcgggaagtgcgagaccctaaggacaaattagtccttgagttcacgttcacc
aaaccagtgctggctgtgcgcatgaggcatgacaaaatcatcattatcctaaaaaacagg
atctacgtctatagttttcccgacaatcctgtcaagctgtttgagtttgacactcgagat
aacccgaaaggtttgtgtgacctgtgccctagtttggaaaagcagttgttggttttcccc
gggcacaaatgcggcagcctgcagttagtggacctttccaacaccaaacctggcacatcg
tctgctcctttcactattaatgcccaccagagtgaaatcgcctgtctggcactgaaccag
cctggcagtgtggttgcgtctgcatctagaaagggcactctgatccgtctgtttgacacc
acaacacgagacaagctagtggagctgcgaagaggaactgaccctgctacactctactgt
attaatttcagccatgactcatcttttctgtgtgcatcgagtgacaaaggaactgtgcac
atatttgcactgaaagacaccaaactgaaccgacgttctgctttggcgcgagtaggaaag
gtgggtccggtcatcgggcagtacgtggacagtcagtggtctctggctaatttcacggtg
ccggctgagtgcgcttgcatctgtgcctttgggaagaacacctccaaaaatgtcaactct
gttattgccatatgtgttgatgggacattccacaagtacgtcttcacccctgatggaaac
tgcaaccgcgaggctttcgacgtctatctggacatttgcgatgatgatgatttctga
DBGET
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