Puntigrus tetrazona (Sumatra barb): 122352513
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Entry
122352513 CDS
T08985
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04142
Lysosome
ptet04144
Endocytosis
ptet05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122352513 (cltca)
04142 Lysosome
122352513 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122352513 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122352513 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122352513 (cltca)
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
122352513 (cltca)
Exosome [BR:
ptet04147
]
Exosomal proteins
Proteins found in most exosomes
122352513 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
122352513
NCBI-ProteinID:
XP_043105878
LinkDB
All DBs
Position
10:complement(11046407..11079418)
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AA seq
1684 aa
AA seq
DB search
MSPSLNPPPLLLSEPISNLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMA
DPNTPIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS
LNTIALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQN
RVVGAMQLYSVERKVSQPIEGHAAGFGQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGT
PPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYM
NRISGETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIQYITNVLQNPDLALRMAVRN
NLAGAEELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQGVPAQPGQTSPLL
QYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLA
LSVYLRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPDQGLQFAQM
LVQDEEPLADITQIVDVFMEYNLVQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQV
ADAILGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFF
GALSVEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFL
GSIVNFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLI
IVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPCRLPVVIGGLLDVDCSEDVIKNLILV
VRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNHPERFLR
ENPYYDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRRDPEL
WASVLVETNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDN
SVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISSELFEEAFAIFRKF
DVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKESIDSYIKADDPS
AYMEVVQVASDNGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNN
AHIQQVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKE
VCFACVDGKEFRLAQICGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMG
MFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAVEQAHLWAELVFLYDKYEEYDNAI
ITMMSHPSDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHSRA
VSFFSKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFISEEDYQALRTSIDAYDNFDNISL
AQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLQ
WFLQEDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMREYLSKVDKLET
SESLRKEEEQATETQPIVYGTPQLMLTAGPSVPVPPQQAYGYGYTAAPGYPQAPQAQPGF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgtctccttcgctaaatcctcctcctctgctcctctctgagcccatttcaaatctccaa
aatttagggatcaacccagccaacattgggttcagcaccctgacgatggagtctgataag
ttcatctgtatccgggagaaggttggagaacaggcccaagtggtgatcattgacatggcg
gacccaaacacccccatccgcaggcccatctctgcagatagcgccatcatgaaccctgcg
agcaaagtcatagcacttaaagacgctgccaaaacccttcagatctttaacatcgagatg
aagagtaagatgaaagcccacaccatgactgatgatgtgactttctggaagtggatctct
cttaacaccattgccctggtgaccgataacgccgtctatcattggagcatggagggagac
tctcaaccggtcaaagtgtttgacagacattccagcctggcagggtgtcaaatcatcaac
taccgcaccgatgccaagcagaagtggctgctactcattggcatttctgctcagcaaaac
cgagttgttggtgccatgcagctctactcggttgaaaggaaggtgtcacagcctatcgag
ggtcatgctgctggctttggacagtttaaaatggagggaaatgcagaagaatccactctt
ttctgttttgctgtgcgaggtcaggcaggaggaaagcttcacattattgaagtagggacg
ccaccaaccggcaaccagccattccctaaaaaagctgtggatgtgtttttccctccagaa
gcacagaatgacttccctgtagccatgcagatcagctccaaacaggacgtcgtatttctc
atcactaaatacggttacattcatctgtatgacctggagacaggcacctgcatctacatg
aacagaatcagcggagagaccatttttgtgacggcaccccacgaagccacatctggaatc
atcggtgtgaacagaaaaggacaggttttgtcagtgtgtgttgaggaggagaatatcatc
cagtacatcaccaatgtgctgcagaatccagacctggctttacggatggcggtccgaaat
aatctggcaggagccgaagagctgtttgcccgcaagtttaacaacctcttcgctgccgga
aactactcagaggcagctaaagtggccgctaatgctccaaagggtatcctgcgcactcct
gacaccatccgccggttccagggtgtccctgcccagcccggccagacatccccactcctg
cagtattttgggatcttgctggaccagggccagctcaacaagtttgagtctctggagctg
tgcagacccgtccttcagcagggccgcaaacagcttctggagaaatggctgaaggaggat
aagcttgaatgctcagaggagttgggcgatttggtgaaatctgtggaccccactcttgct
cttagtgtctacctgagggccaacgtacccaacaaagtcattcagtgtttcgcagaaacc
ggacagtttcccaaaattgtactgtatgccaaaaaggtgggctacactccagactggatc
ttcctgctgaggaacgtgatgcggatcagtccggatcagggtctgcagtttgctcagatg
cttgttcaggatgaggaacctcttgctgacatcacacagatcgttgacgtgtttatggag
tataacctggtccagcagtgcacgtctttccttttggatgctctgaaaaacaaccgtcca
tcagaaggtccactgcagacccgtctgctggagatgaacctgatgcatgcgccacaggtt
gcagatgccatcctaggaaatcagatgttcactaactacgatcgtgcccacattgcccag
ctgtgtgagaaagcagggcttctgcagagggctttagagcactatactgacctgtacgac
atcaaacgagctgtcgtacacacacacctgctcaacccagagtggctggtgaactttttt
ggtgctctgtcagtggaggactctctggagtgtctaagagccatgctatctgctaacatc
aggcagaaccttcagatctgtgtccaggtggcctccaagtatcacgagcagctgactacc
cagtccctcactgaactttttgagtctttcaagagttttgagggtctgttctacttcctt
ggctcgattgtgaacttcagccaggacccagaggtgcatttcaaatacatccaggccgca
tgcaagacgggccaaatcaaagaggtggagcggatctgtcgggaaagcaactgctatgac
cctgaacgtgtcaagaactttcttaaggaagctaaactcaccgaccagctgcccctcatt
attgtgtgtgatcgcttcgacttcgtccatgatcttgtactctatctgtaccgaaacaac
ctgcagaagtacatcgaaatctatgtgcaaaaggtgaacccatgccgtcttcctgtggta
attggaggtctcctggatgttgactgctccgaggacgtcatcaaaaacctgatcttggtt
gtgcggggccagttttccaccgatgagctggtggcagaagtggagaagagaaacagactg
aagctgttgttgccatggctggagtctcgtatccacgagggctgtgaggagccagctacc
cacaatgccttggccaagatctacattgacagcaacaaccacccagaacgcttcctgcgg
gaaaacccatactacgacagccgtgtggtggggaaatactgcgagaaaagagaccctcac
ctggcctgtgtggcctacgagagaggacagtgcgaccaggagctcatcaacgtgtgcaat
gagaactcgctgttcaagagcttgtcccgttacctggtgcgccgcagagacccggagctc
tgggctagtgtgcttgtggagaccaatccctacagaaggccccttattgaccaggtggtg
cagacagccctgtcagagactcaggacccagaggaggtgtccgtcacagtgaaggccttc
atgactgctgacctgcccaatgaactcattgagctgctggaaaagatcgtcctggacaac
tctgtgtttagtgaacacagaaacctgcagaacctgctcatcctgacagccatcaaagcg
gaccgcacccgtgtcatggaatacatcaaccgtctggacaattacgacgccccagacatc
gccaacatcgccatcagcagcgagctgttcgaggaggcatttgctatcttcaggaagttt
gatgtcaacacctctgcagtgcaggttctgattgagcacattggtaatctggaccgggct
tatgagtttgcggaacgctgtaatgaacctgctgtgtggagccagctggcgaaggctcag
ctgcaaaagggtcttgtcaaagagtctattgactcctacatcaaggctgatgacccttcg
gcttacatggaggtggttcaggtcgcttccgataatggcaactgggaggatctggtgaag
tttctacagatggctagaaagaaggccagagagtcatatgtggagacagagctgatcttc
gcactggccaaaaccaaccgtctcgctgaactggaggagtttataaatggaccaaataat
gcacacatccagcaggttggagatcgctgctatgacgagaagatgtacgaggctgccaaa
cttctgtacaataacgtctccaacttcggccgcttggcttccaccctggtccacttgggc
gagtatcaagctgctgtggacggtgcccgcaaagctaacagtactcgcacatggaaggag
gtgtgcttcgcttgtgtggatgggaaagagttcagattggctcagatatgcggccttcac
atcgtggttcacgccgatgaactagaagagctcatcaattattaccaggaccgtggctac
ttcgaggagctgatcaccatgctggaggcagcgctggggctggagcgcgctcacatgggc
atgttcacagagctggccatcctctactctaaattcaaaccacagaagatgagggaacac
ctggaactcttctggtccagagtcaacatcccaaaggtcctgagggccgtggagcaggct
cacctgtgggcagagcttgttttcctctacgacaagtatgaagaatatgacaacgccatc
atcaccatgatgagccatccttcagatgcctggaaggagggacagttcaaggacatcatt
accaaggtggccaacgtggaactgtactacaaagcaattcagttttatctggagttcaag
cccttgttactgaatgacctgctcatagttctttccccaagactggatcactctcgtgcc
gtcagtttcttcagcaaggttaagcagcttcctctcgtcaagccttacctacggtcagta
caaaaccacaacaacaagtctgtcaatgaagcacttaacaacctcttcatctccgaggag
gactatcaggcgctcaggacatctatagatgcatacgataactttgacaacatctcactg
gctcagcgtctggagaaacatgagctgatagagttcaggagaattgctgcttacctcttc
aagggcaacaaccgatggaagcagagcgtggagctgtgcaagaaagacaaactttacaag
gatgccatgcagtacgcgtctgagtcgaaggacatagagctggccgaggagctgctgcag
tggttccttcaggaagataagaaggagtgtttcgccgcttgcctcttcacctgctatgac
ctgctcaggcctgatgtggtgctggagacggcatggaggcacaacatcatggactttgcc
atgccttacttcatccaggtgatgagggaatacctcagcaaggtggataagctggagacc
tctgaatccttgaggaaagaagaggagcaggcgacagagactcaacccattgtttatggc
acgcctcagctcatgctgacagcaggccccagtgtgcctgtccccccgcagcaggcttac
ggctacgggtacacagcagcgcctggctacccccaggctcctcaggcacagccgggtttc
ggttacggcatgtaa
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integrated database retrieval system
