Puntigrus tetrazona (Sumatra barb): 122352565
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Entry
122352565 CDS
T08985
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
122352565 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122352565 (depdc5)
Membrane trafficking [BR:
ptet04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
122352565 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
122352565
NCBI-ProteinID:
XP_043105941
LinkDB
All DBs
Position
10:complement(5253037..5274154)
Genome browser
AA seq
1631 aa
AA seq
DB search
MTVTMKANKSYKLVVHKKGFGGSDDELMMNPKVFPQVKLGDIVEIAHPNDEYSPLLLQVK
SLKEDLQKETISVDQTVAQAFKLRAYQDVIINIVDPKDVTLDLVELTFKDQYIGRGDMWR
LKKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVRMSIWKFKLRYYPS
PMFFPHVFSTQVVFRSTSAMVYIFIQMSCEMWDFDIYGDLYFEKAVNGFLSDLFAKWKEK
NCSHEVTVVLFSRTFYSAKSLEEFPELQRASVRQDHEGRYYEDFYRVVAQNERRDEWTSL
LITIKKLFIQYPVLVRLKGADGFLCGHNSTAAQGNYLEAINLSFNVFDKHYINRNFDRTG
QMSVVITPGVGVFEVDRLLMILTKQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNRTVHGD
SRIGDDYNLPHWINHSFYTSKSQNSCSCFTPRIKLAGKKAHAEKAKSSKEHSLGAPKDEN
SLPIQVDYDAYDAQVFRLPGPSRAQRSTNFRSSRERESASRKSWGSTDVGGVVGSSPPIR
PTGPEEQRSLASDDSLSHISNILLIPRPAQGQYEVSSSLGYTSCTRELLEKMVESQRDSS
APGRFTVGSAESTLHIRPGGYTPQRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAI
QIHHQTRQNMAELQGSEQRDPARTSAELLELAYHEATGSKRTTSRHAGENGLYITGVPDN
VSGSPASSNSTGTPVNRGSFEDYSSPDPILLLSAPPTVPSFCCTVGVDWKSLTTPACLPL
TTDYFPDRQTLQNDYTEGCYDLLPHTDLERRDDETPVMTAHQVFEEFICQRLMQGYQIIV
QPNRKAQAVIAPPLSSSPLYSRGLVSRRKPEEEESVYWLSMGRTFHKVCLKDKIITVTRY
LPKYPYESTQIQYSYNLCPPHVDAHFLPFWVEFSHERLEEYKWNYLDQYICSAGSEDFSL
IDSLKFWRTRFLLLPAGGARRVADGEGHWDVYGEGMGAGRDGLSGTGDWSLLDGFIRFLE
GLNRIRRRHRSDRIIRKGAPIKGLQVTGALSSYNPEPIAPPVGKKGTSALSALLELDQTQ
KSLEEQQLATQHGGKSCGPFSEAASVALTTTYVDSPRKDAAFILDFIRSPRSSYICHSQL
PAEQISANHTEGGLSDKGGSQPGERTSATSQATGDATPGTGSETGGQSGSSGLSLSSSST
LMDILEAIKHPTTGVQLLPEQRGLPPNCFVSAEVVHWLVSTVENVATHGIAVEIMQKMLD
EGLITHASGDAMRTFVYGFYLYRIVDKDNEKAPTTQLPPAGANVWSAAALEDFALFQRKW
FEVAFVMEERRPCDLPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQKT
VTLDVDVNNRSDRTEWCSCYYHGNFSVSAAFEIKLHWMAVTAAVLFEMVQGWHRKAASCG
FLLVPVLEVPFALSSYLYGDPLRAQLFIPLNIQCLLKEGCDNLFEGFEPETYLDRMQLFQ
EAILSRFGFVQDKFSASAFNFPSENKPQYIHVTGTVFLQLPYSKRKYSSGQRRRRNSATS
TSQSLFGSEERVGYNWAYNTMLTKAWRTGVLGDEKLADRLLRDFTDFCANKDNRLVTFWE
SCVEKMNASAP
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgactgttaccatgaaggcaaacaaatcctacaaacttgtggtgcacaagaaaggcttt
ggagggagtgatgatgagttgatgatgaatcctaaagtctttcctcaggttaaactgggg
gatattgttgagattgcacatccaaatgatgagtatagtcctctgctgcttcaggtcaag
agtttaaaagaagacttgcagaaagaaactatcagtgtagatcagacagtggctcaggcg
ttcaagcttcgtgcttaccaggacgtcatcatcaatattgtggacccaaaggatgtgacc
ttggatctggtggagctcaccttcaaagatcagtatatcggacgaggagacatgtggaga
ctgaagaagagcttagtgagcacatgtgcatatgtgacacagaaagtagagtttgcagga
atcagggcccaggccagtgaattgtgggtaaaaggagagaaggtcacttgtggctacatt
agtgaagatacaagggtgagaatgtctatttggaaattcaagttgcgttactatccatca
cccatgttttttccacatgttttctccacccaggtggtgtttcggtccacctcagcaatg
gtttatatattcattcagatgagctgtgagatgtgggactttgatatctatggtgatctt
tactttgagaaagctgtcaatggtttcctctcagatctgtttgctaaatggaaagagaag
aactgcagccatgaggttacagtggtgttgttctctcgtaccttctactctgctaaatcc
ctggaagagtttccagagctccaaagagcttcagttcgacaagatcatgagggacgttat
tatgaggatttctacagagtggtggcccagaatgaaaggcgtgatgagtggacatctttg
ctcatcaccattaaaaaactcttcatacagtatcctgtgctggtgcgtcttaaaggagca
gatggattcctgtgcgggcacaattccactgctgctcagggaaattatctggaagccatc
aacttgtctttcaatgtttttgataaacattacatcaaccgtaactttgaccgtacgggc
cagatgtcagtggtcattactccaggagtgggtgtgtttgaagtggaccgcttgctcatg
attctcaccaaacagcgcatgattgacaatggcatcggtgttgatctggtatgcatggga
gagcagcccctccatgctgttccactcttcaagttacataaccgcacagtgcatggagac
tctagaattggtgatgactacaaccttcctcactggatcaaccacagcttttacacatca
aaaagccagaactcctgcagctgttttacaccacgaatcaagctggcaggaaaaaaggct
catgctgagaaagctaaaagcagcaaagaacactctcttggtgcaccaaaagatgagaac
agcctaccgatccaggtggactatgatgcgtatgatgctcaggtcttcaggcttcctgga
ccttccagagctcagaggtccaccaacttcaggtcgagtcgggagagagagtcagccagc
aggaaaagttggggctcaacagatgttggaggtgtagtgggcagctctcccccaatcagg
cctacaggaccagaagaacagaggagtctggcatcagatgacagtctgagccacatctcc
aacatcctgctcatcccacgcccggctcagggccaatatgaggtcagcagctccctgggg
tacaccagctgcacaagagaattgctagaaaagatggtagaatcccagagggactccagt
gctccaggccgcttcacagtgggaagtgctgagtccacccttcacatacggcctggtggt
tacacacctcagagggccctcatcaacccattcgccccttcacgcatgccaatgaaactc
acctctaaccgccgtcgctggatgcacacatttcctgtgggtccttctggagaggcaatc
cagatccaccatcagacgcgacagaacatggcagagctgcagggtagtgagcagagagac
ccagctcgtacctccgctgaactgctggaactggcctatcacgaagccacaggaagcaag
cggaccacatcccgtcatgcaggagagaatggactgtatatcacgggagttcctgataat
gtctctggaagcccagctagtagcaacagcactggaacaccagtaaaccgtggttctttt
gaggattactccagtccagatccgatcctgctgctatctgcccctccgacagtgcctagt
ttttgctgcacggttggggtggactggaagtccctcaccactcctgcctgcctcccgctc
accactgattattttcccgaccgtcaaaccctgcagaatgactacacagagggctgctac
gacctgctgccacacactgacttggagagacgtgacgatgagactccagtgatgacggcc
catcaggtgtttgaagagtttatctgtcaacgactaatgcaaggctaccagatcattgta
cagcctaacagaaaggcacaggcggttatagccccacccctcagcagcagccccctttat
tcccgagggctggtgtctcgacggaaaccagaggaggaggagagtgtttactggctaagt
atgggaagaacctttcataaagtctgccttaaagataagatcattaccgtcacccgttac
ctcccaaagtatccctatgaatccacacagattcagtacagctacaatctgtgccctcca
catgtagacgcccacttcctgccattttgggtggagttcagccatgagaggctggaggag
tacaaatggaactaccttgatcagtacatctgttctgcaggctcagaagacttcagtctt
atcgactctctgaagttctggcgcacgcgcttcttgctgctgccagcgggcggagccagg
cgagtggcggatggtgagggtcactgggatgtgtatggggagggaatgggggcaggccgg
gatggtctctctggcactggcgactggtctcttttggatggatttatccgctttttagaa
ggtttgaacaggattcgtcgccgtcaccgatctgatcgtattatccgcaaaggagctcct
attaaaggcctgcaggtgacaggggccctctcatcctacaacccggaacctatagcaccc
cctgtgggcaaaaaaggcacctctgccctctctgcactcctggagctggatcagacacag
aagagtttagaagagcagcagcttgctactcagcatggtgggaaatcatgtggacctttc
agcgaagctgccagcgttgccctaacaaccacctatgtcgatagcccccgtaaggacgct
gccttcattttggactttattcgtagtccacgttcctcctacatctgtcattctcagctg
ccagctgaacagatttcagcaaatcacactgaaggtgggttgtcggacaaaggaggcagc
caaccaggagagagaacatccgctacatcccaagccacaggagacgcaaccccagggact
ggttcagagactggtgggcagtcagggtccagtggattgagtctttcctcatcttccaca
ctaatggatatcctggaagccattaagcatcccaccactggagtgcagcttttgccagag
cagaggggcctgcctcccaactgctttgtcagtgctgaggttgtacattggctggtcagc
actgtggagaatgttgccacacacggcattgcagtagaaatcatgcagaaaatgctggat
gaaggtctaattacacatgcctctggtgatgcaatgcggacgtttgtctatgggttctac
ctctaccggattgttgacaaagacaatgagaaggctcctacaactcagctgccaccagcg
ggagccaatgtatggtctgccgctgctttggaggacttcgccctattccagaggaagtgg
tttgaggtggcgtttgttatggaggaacgtcggccctgtgacttacctgccttcctcctg
ccctggttgcccagtcggccagcctcgtatgcaagtaggcatagctccttcagccgcagc
ttcggaggacgcagccaagctgccgcactgctagctgccacggtaccagagcagaaaaca
gtcaccttggacgttgatgtgaacaatcgcagtgatcggactgaatggtgcagttgctat
taccatggcaacttctccgtcagtgctgcctttgaaatcaagctgcactggatggctgtt
actgcagccgtgctctttgaaatggtgcaaggttggcacagaaaggcagcatcttgtgga
tttctgcttgtaccagtgttggaggtgccctttgccttgtcatcgtacctatatggtgac
cctcttcgtgctcaattgtttattcccctaaatatccagtgcctgctaaaggagggctgt
gataacttgtttgagggatttgagccagagacatacttggacagaatgcagttgtttcag
gaggccatactctccagatttggctttgttcaagacaaattctcagcatcagcttttaac
tttccatcagaaaacaaacctcagtacatccatgtaacaggtacagtttttcttcagctg
ccttactcaaaaaggaaatattccagtggacagcggcggcgccgtaactctgctacctcc
accagtcagagcctgtttggttctgaggagcgagtgggctacaactgggcctacaacacc
atgctgaccaaagcctggaggactggcgtactgggggatgagaaactggctgaccgcctg
ctgcgagatttcacagacttttgtgccaacaaggataatcgactggtgaccttctgggaa
agttgtgtggagaaaatgaacgccagtgccccttga
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integrated database retrieval system
