Puntigrus tetrazona (Sumatra barb): 122352700
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Entry
122352700 CDS
T08985
Symbol
trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122352700 (trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ptet04031
]
122352700 (trim23)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122352700 (trim23)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122352700 (trim23)
GTP-binding proteins [BR:
ptet04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
122352700 (trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
zf-RING_2
MMR_HSR1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
122352700
NCBI-ProteinID:
XP_043106171
LinkDB
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Position
10:complement(1854090..1862055)
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AA seq
579 aa
AA seq
DB search
MAAAVGVNKQTSAASMESCVRHGRGTTSNAVKVLECGVCEDVFSLQGDKVPRLLLCGHTV
CHDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGASNQSGMSED
ALREMGECIIRCDEDETHTASMYCTVCATHLCAECSQLTHSTRTLAKHRRVPLADKPHEK
MLCPQHQVHAIEFVCLEDGCQPGPLMCCVCKEYGKHQGHKHAVLEAEANQIRASILDMAH
CIRTFTEEVSEYSRKLVGIVQQIEGGEQIVEDSMGLAHTEHVPGTAESARSCVRAYFADL
HETLCRQEEMALSVVDAHVRERLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVVL
AKQEINRLLETLQKQQQQFTELADHIQLDAGIPVTFTKDNRVHIGPKMEIRVVTLGLDGA
GKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAV
VFVIDSCHRDRLMESHSELAKLLTEKELRDALLLIFANKQDVPGAVSVEEMTELLSLHKL
CCGRSWHIQGCDARSGMGLHEGLDWLSRQLVAAGVLDVA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgctgtcggtgtaaataaacagacgagcgcagcgtcgatggagtcgtgtgtg
agacacggccgaggcacgacctcaaatgcggtgaaggtgttggagtgcggtgtttgtgag
gatgtgttttcactgcaaggcgacaaggtgccgcggctgctgctgtgcggacacacggtg
tgtcacgactgcttgacccgtctgcctctccacggcagggcagttcgctgcccctttgac
agacaggtcactgagctgggagactcgggtgtgtggggcctgaagaagaactttgctctg
ctagaactgcttgaacggctgcagaatggggccagcaatcagtcaggcatgtcagaggat
gcgcttcgtgagatgggcgagtgcattatccgctgtgatgaggatgagactcacactgct
tccatgtactgtacggtttgtgccacacacctgtgcgccgagtgctcccagctcacccac
tccacccggacactggccaaacaccggcgcgtgccgctggcagataaaccccacgagaag
atgctctgtccgcagcatcaggtgcatgccattgagtttgtctgcctggaagacggctgc
cagcccgggccgctcatgtgctgcgtgtgcaaggagtacgggaagcaccaaggacataag
catgctgtattagaggctgaagccaaccagatccgagcgtccatcctggatatggcacac
tgcatccgtacattcacagaggaagtgtcggagtactccaggaaactagtgggcatcgtg
cagcagatcgaaggaggagagcagatcgtggaggacagcatgggcctggctcacactgaa
cacgtaccaggaacagccgagagcgcccggtcttgcgtgcgtgcctattttgcggatcta
catgagacgctgtgccgtcaggaggagatggctctgagcgtggtggacgcacacgtccga
gagaggctgatctggcttcgacagcagcaggaggacatgaccatactgctgtcgcaggtg
tccaccgcctgtctgcactgcgagaaaacactgcagcaggacgattgcagggtggttttg
gcgaaacaggagatcaaccggttactagagaccctgcagaaacagcagcagcagttcaca
gagctggccgaccacattcagctggatgcaggcatccctgttactttcacaaaggacaac
cgtgtgcacattggtccaaaaatggagatccgggttgtgactttgggtttagatggagct
ggaaaaaccactattctcttcaaactgaagcaggacgagtttatgcagcccataccgact
ataggttttaatgtagaaacggtggagtacaaaaacctgaaattcaccatttgggacgtc
ggtggcaaacacaaacttcgtccgctgtggaaacactactatctgaacacacaagcggtg
gtgtttgtgatcgacagctgtcacagagaccggctgatggagtctcacagcgaactggcc
aaactgttgacggagaaagagctccgagacgctctgctgctcatcttcgccaacaaacag
gacgttcccggcgcggtgtctgtggaggagatgacggagctcctgagcttacacaaactg
tgctgtggccgcagctggcacatccagggctgtgacgcccgcagcggcatgggtctacac
gagggcttggactggctctcacgccagctggtggccgcaggagttctggacgtggcctga
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