Puntigrus tetrazona (Sumatra barb): 122352735
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Entry
122352735 CDS
T08985
Symbol
itga1
Name
(RefSeq) integrin alpha-1 isoform X1
KO
K06480
integrin alpha 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04510
Focal adhesion
ptet04512
ECM-receptor interaction
ptet04518
Integrin signaling
ptet04810
Regulation of actin cytoskeleton
ptet04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122352735 (itga1)
04518 Integrin signaling
122352735 (itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122352735 (itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122352735 (itga1)
04810 Regulation of actin cytoskeleton
122352735 (itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122352735 (itga1)
04515 Cell adhesion molecules [BR:
ptet04515
]
122352735 (itga1)
04090 CD molecules [BR:
ptet04090
]
122352735 (itga1)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122352735 (itga1)
Cell adhesion molecules [BR:
ptet04515
]
Integrins
Integrin alpha subunits
122352735 (itga1)
CD molecules [BR:
ptet04090
]
Proteins
122352735 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Clathrin
MFS_Mycoplasma
DUF5315
LYRIC
Collectrin
Motif
Other DBs
NCBI-GeneID:
122352735
NCBI-ProteinID:
XP_043106246
LinkDB
All DBs
Position
10:709494..748934
Genome browser
AA seq
1186 aa
AA seq
DB search
MLSGVLRFTPAALLALLPWLSCFNVDEKNQMSFSGPVEDMFGYTVQQFENSEGKWVLIGS
PLTGQPAKRTGDVYRCPVGQNKNATCEKFLLPENTTIPNINEVKENMTMGTTLVVNPDGK
GFLACGPQYGYMCGKQQYITGICSNVSSSFKVLNSIAPTVQECKQDMDIVIVLDGSNSIY
PWEPITDFLVKFLQNITIGPAQVGIVSYGDDVGHIFNLSQFSNRDELLNEAAKIPQRTGH
KTMTALGIDTARKEAFTAERGARPGVKKVMVIVTDGESHDHYDLEKVIKECEEDGIERFA
VAVLGDYNRQNKTLEEIQNFVAEIESIASEDKSDHFFNVSDEKALVTIVDALGSKIFALE
ATSENHTSSFEMEMSQSGFSAHTSRAGVMLGAVGAFEWDGTVVMQSGQEFVVPERNTFRD
PADKRYEGTAGYIGYDVQSANTRHGTLYITGAPRFNHSGRVTVYRFHRGNVTITQMLKGE
QIGSYFGSVLQTQDIDGDNYTDILLVGAPMFMGPERDEQGQVYVYRLKEDGLFEHEMTLK
PVNQTCCSAHSQSTCKSVSKNEPCGARFGTAIAAVPDLNLDGYRDIVIGSPLENDHRGAV
YIYHGSHKSIKEKYVQRIAAGGDGERMKFFGQSIHGIMDLNDDGIIDVTIGGIGGAALFW
SRDVAELVAEMTFDPSKINLQQTCQVQGRTTVCVKTRVCFRYRIKSDKKSTTGTVIRYSL
TLDSLRAIARVRFNETDSRRLQKVQSIVDQLCREHTFYTSDKLDFRDPIMVTLEFGLAEE
DSGPVLDGDKPTSLNKSITLVDCGNKDKCVANLHLNAKANISRLLIKSNQEKFYVNIDVH
NSGDNAYNSKVTLSHTENINYVKVEPKDKDCETNNTKIVCAVGYPFLKTDKKESFKIQFE
PNPSHIRKDIVINVTAATDSKELDSALKDNFKSIVIPVQHEANLRVTLNKYMKEDHIIIK
EKETIPSVFNHTSVIGEELKISYTIERDTEMQTPPLLLKIMFPYQTSFKNVLLYMTDVSL
TAGIVCDAGRLINPLGIAPDKPYTVTAKKETLSVYLLSCKTKGNDCESFSCTIPPGDFKQ
VNASFRVWRPTFIKGEFSKIHVAIDAILESKDTDLFVLNDNIKTREVKFQVTKDIRSEIP
LWIIILSILIGLLILALVIFVLWKAGFFKRKSVEDMKQDMKEDVKE
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgctttctggagtccttcgtttcacaccggcagcgcttttggctctgctgccatggttg
tcatgtttcaatgtggacgagaagaaccagatgtcattcagcggaccggtggaggacatg
ttcggatacaccgtccagcagttcgagaacagtgagggaaagtgggttctgatcggttct
cctctgactggacagccggcgaaacggaccggagacgtctacaggtgccccgtgggacaa
aacaaaaacgctacatgtgaaaaattccttttgccagaaaacacgaccattccgaacata
aatgaagtgaaggaaaacatgacgatggggacgacgctggtggttaaccccgacggcaaa
ggctttctggcctgtggacctcagtacggatacatgtgtggaaaacagcagtacatcacc
gggatctgctccaacgtcagctcctccttcaaagtgctcaactccatcgctccgactgta
caagagtgcaagcaggatatggatattgtcatagtgctggacggctccaacagcatctac
ccgtgggaacccatcacagatttcctcgtcaaatttctacagaacattacaatcggaccg
gcccaggtgggcatcgtgtcttatggagacgatgtcggccacatcttcaacctcagccag
ttcagtaacagagatgagcttctcaacgaagctgctaaaatacctcaaagaaccggccac
aaaaccatgacagccctcggcatcgacacggcgaggaaagaggcttttacagcggagcga
ggagcgaggccaggggtcaaaaaggtcatggtgatcgtcacagacggcgagtcacatgac
cactacgatttggaaaaggtcattaaagagtgtgaagaagatgggatcgagcggttcgct
gtcgctgtccttggtgactataaccgacaaaataaaaccctggaagaaatacagaatttt
gttgctgagatcgaatcgattgctagcgaagacaaaagcgatcatttcttcaacgtgtcg
gatgaaaaagcattagtgaccatcgtggatgccttaggaagcaagatcttcgccttagag
gccacatctgagaaccacacgtcctcgtttgagatggagatgtctcagtcgggcttcagc
gcgcacacgtctcgagcaggtgtgatgctgggagccgtgggggctttcgaatgggacggg
actgtagtgatgcaatccggccaagagttcgtcgttcccgaaagaaacaccttccgcgac
cctgcagataagagatacgagggcacggcgggatacataggttatgacgtgcagtcggcg
aacacacgccacgggacgctgtacatcacaggagcaccacgcttcaaccacagcggccgg
gtcaccgtctaccgcttccaccgaggaaacgtcactataacacagatgctgaaaggagag
cagatcggctcctacttcggcagcgtcctccagactcaggacatcgacggtgacaattac
accgacatccttctggtcggagctcccatgttcatgggtccggagagggacgaacaaggt
caagtctacgtctacagactcaaggaggacgggctgtttgaacacgagatgactctgaag
ccggtgaatcagacctgctgttcggctcactcccagagcacctgtaagagcgtcagtaag
aacgagccctgcggagcacgcttcggtaccgccatcgccgccgtccctgacctcaacctg
gacggatacagagacatagtgatcgggtcaccgctggagaacgaccacagaggggccgtg
tatatttaccacggctctcacaaatccataaaggagaagtatgtgcagcgcatcgctgcc
ggaggagacggagagcgcatgaagttcttcggccagtcgatccacggcatcatggatctg
aacgatgacggcatcatcgacgtcaccatcggaggaatcggaggagccgcgcttttctgg
tctcgggatgtcgcggaacttgttgccgagatgacctttgaccctagcaagatcaatctg
cagcagacgtgtcaggttcaagggaggaccacagtatgcgtgaagaccagagtgtgcttc
cggtaccgaatcaagtctgacaaaaaaagcaccacgggaacggtcatcaggtacagcttg
actctggattctctgagagcgattgctcgagtccggtttaatgaaacggacagcaggagg
ctgcagaaggtccagtccatcgtggaccagctttgcagagaacacaccttctacacgtcg
gataaactggatttcagagaccccattatggtcacgctggagttcggcctggcggaagaa
gactcgggtccagttctagacggggataaaccgacgtcactcaacaagagcatcacatta
gtggactgtgggaataaagacaagtgtgttgctaatctgcaccttaacgccaaggctaac
atctcaagacttctcataaaaagtaaccaggagaagttttatgtgaacatcgacgtccac
aacagcggagacaacgcctacaactccaaggttacgctgagccacaccgagaacatcaac
tacgtgaaagtcgagcccaaagataaagactgtgaaacgaataataccaaaatagtatgt
gctgttggatacccttttcttaaaactgacaaaaaggaaagcttcaaaatccagtttgag
cccaatccctctcatatccgtaaggacatcgtgatcaatgttactgcagccactgatagc
aaggagttagattcagccttgaaggacaactttaagagcatcgtcatccctgtgcagcac
gaagccaacctgagagtcactctaaacaagtatatgaaggaggaccacatcataataaaa
gagaaggagaccatacccagtgttttcaaccacactagcgtgatcggggaagagctgaag
atcagctacacgatcgagagggatacagaaatgcagactcctccgctgctgctcaagata
atgtttccgtatcagacgtccttcaaaaacgtcctgctgtacatgacagacgtcagcctc
acagcgggaatcgtctgcgatgccggaagactgattaaccctttaggcatcgcgcctgac
aagccttacacagtaactgctaaaaaagagaccttgagtgtatatcttttgagttgcaaa
acaaaaggaaatgactgcgagtcgttcagctgcacaatccctcccggagacttcaagcag
gtcaacgcctctttccgagtgtggcgtcccaccttcatcaagggagagttttccaaaatt
cacgtagctatcgacgccatcctggagagcaaggacacggacctgtttgtgttgaacgat
aacatcaagaccagagaggtcaagtttcaggtcaccaaagacatacggagcgaaatccct
ctatggattatcattctcagcattctaataggccttttaattctggcactcgtcatcttt
gttttatggaaggctggattcttcaagagaaaatcggtggaggacatgaagcaagatatg
aaggaagatgtaaaggaataa
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