Puntigrus tetrazona (Sumatra barb): 122352736
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Entry
122352736 CDS
T08985
Symbol
gigyf1b
Name
(RefSeq) GRB10-interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122352736 (gigyf1b)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122352736 (gigyf1b)
Surveillance factors
Other surveillance factors
122352736 (gigyf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
CAF1A_acidic
TRI4_N
Motif
Other DBs
NCBI-GeneID:
122352736
NCBI-ProteinID:
XP_043106249
LinkDB
All DBs
Position
10:7695316..7708220
Genome browser
AA seq
1000 aa
AA seq
DB search
MTAETLNFGPEWLRALSRGGSVTSPPPSPAMPKSKLADYRYGREEMLALYVKDNKIPEDM
QDKEFAAILQEEPQQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGGGAVPAGVARGRGS
TRGGRGRGRGESGFYQRSVDEEVGFGRGREMHRSQSWDDRGERRFEKPLRRDSGRGGFEE
GGAGGRKDYARSDSENWRTLREEQEEDDGTEPGGSWRIAGGRRDEGGPRSAGWRDHVSGD
GRRRKFDFDFRDGEGGRRRAGSEGGEEERDGLPEWCTDEEEGEMGTFDSSGAFMCIKKNS
RDAIPEDQELEFEALEEEEEGGQEKNDSLADKSDTCEAIAVCDGDRKSSSPHAVSAPAPM
HPVSEEEIPKPIVTPPSKLAPQPSEDAAPAGGTTTQMQSSSPPSTTGTDLPTAGGDTEEE
DGMKHLQQEAEKMVASLQDTSLEEECFTQALQESHITAAHTHTHPNAHTHSHSTSHTLSH
SASALPLSHESAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMNLLVKRGCDEGFQPLG
EVIKMWGRVPFSPGPSPPPLLGNMDQEVLKKQLEQAATAALYQQLQMRFQHMNRCGETGM
MPAMNRSMSVPDTGPMWDMPTSVSQQSGGETNLWDLTMSNSTQGPTLEHLQKIQQERREA
ELRKREEEERKRREEKRRQQEEQKRREEEELYRRKQQCRQQQELIMKFLQQSQQQQSVPG
GAGWSGSQTALSLGKASGKSMGILELEAERLHKQQQQRAQQQQRHGGLTMGQWSDGPSGM
WSGAGMEGKVGGGNPAMGMWDEAMKNQSSHRNIGLKNSRSSPSLSDQYLLNRRKRTDDEE
RLLKLLQGMKPQDGFTTWCEQMLHALNTSANNSSSVDVPTIVAYLKEVESPYEVHDFIRI
YLGDTIEAKEFAKQFLERRAKQKANHQRQQQQLSKEVSGLNMNFPLQSMFQAAHMSKGGS
VYDTQGGKAKKKPSMMLHSDPSILGYSFLGGGELEQVEDY
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggtccagaatggctccgtgcactatccagagggggg
agtgtaacgtcccctcccccttcccctgcaatgccaaagtccaagttggccgactaccgc
tatggccgcgaggagatgttagcactttatgtcaaagataacaagatccctgaggacatg
caggataaggagttcgctgctatcctgcaggaagagcctcagcagccattggccttggtg
cccctgactgaggaggagcagagaaacttctccatgtctgtaaacagtgtggctgtgcta
aggcttatgggtaaaggaggtggagctgtaccggcaggtgtagctagagggcgtggaagc
actcgagggggtcgagggagaggcagaggagagagcggattctaccaaagaagtgtggat
gaagaggtcggttttggccgaggccgagagatgcaccgcagtcaaagttgggatgacaga
ggtgagcggcgctttgaaaagcccttgagacgtgatagtggacgtggtggttttgaggag
ggaggagcaggaggaaggaaggactatgcacgctcagacagcgaaaactggcgtacgctc
agagaggagcaggaggaggatgatgggacagaacctgggggaagctggaggattgctgga
ggccgtcgtgatgaggggggtccacgttcagcaggttggcgggatcacgttagtggggat
ggtcggcgtaggaagtttgactttgacttccgagatggtgaaggtggacgtagaagggct
ggaagtgagggaggagaggaagagcgagatggcctgcctgagtggtgcactgatgaagaa
gaaggggagatgggaacctttgattcttctggagccttcatgtgtattaagaaaaactcc
agagatgcaatccctgaagaccaggaactggaatttgaagctctagaggaggaagaggag
ggtggtcaagagaagaatgacagccttgctgataaatcggacacatgtgaagcaatagcc
gtatgtgatggagacagaaagtcatcatctcctcatgctgtgtctgctcctgcccctatg
caccccgtttcagaagaagaaattcccaaacccatagtcactcctccttcaaaacttgca
ccccaaccgtctgaagatgcagctccagcaggtggcaccacaacgcagatgcagagctcc
tctcctccctcaaccactggtactgaccttccaacagcagggggagacactgaggaggaa
gatggcatgaagcaccttcaacaggaggctgagaagatggtggcgtccctgcaagacacg
tcccttgaagaggaatgtttcactcaagctcttcaagagagccacatcactgcggctcac
actcacacacacccaaatgcacacacacactctcactctacttcacacactctctcacac
tctgccagtgctctgcccctctcccatgaatccgcaatgaagtggttctacaaagaccct
caaggggagattcaaggtccattcactacagtggagatgtgtgagtggtttcaggcaggg
tatttcaccatgaacctgctggtcaaacgtggctgtgatgagggatttcagcccctaggt
gaagttatcaagatgtgggggcgtgtgcctttctctcccggaccctcccctcctccattg
ctggggaacatggaccaggaggtgttaaagaaacaattagaacaagctgccactgcagcc
ctataccaacaacttcagatgagatttcagcacatgaacaggtgtggggagactgggatg
atgcctgcgatgaacaggtccatgtcagtgccagacaccgggcccatgtgggacatgcct
acctcagtctctcagcagtcaggcggtgagaccaatctgtgggacttaaccatgagtaac
tccactcagggtccaactcttgaacatttgcagaaaatccagcaggagaggcgtgaagct
gaactcaggaagcgtgaagaagaggagaggaagcggagggaggaaaagcgccgacagcag
gaggaacagaagaggagagaggaggaggagctttatagacgaaaacagcagtgccgtcaa
cagcaagaactgatcatgaagtttctgcagcagagtcagcagcagcagagcgtgccaggg
ggcgcaggatggagcggaagccagacagctctgtctctgggcaaagcttccggaaagagc
atgggaatcctggagctggaggcagagagacttcacaaacagcagcaacagagagctcag
cagcagcaaaggcatggaggtttgacaatgggccagtggagtgatgggccatctgggatg
tggtcaggagctggcatggaaggcaaggtcggaggtggcaaccctgctatgggcatgtgg
gatgaggccatgaagaaccagtccagccatcgcaacattggcctgaagaacagccgcagc
agtccctctctcagtgatcagtacttgctgaatcggcgtaagcgtactgacgatgaggag
aggcttctgaagcttcttcaggggatgaaacctcaggacggtttcaccacttggtgtgaa
cagatgctccatgctctcaacacctctgcaaataactcctcctcagtggatgtgcccacc
attgtggcatatctgaaggaggtggagtctccatatgaagttcatgactttatccgtatt
tatctgggcgataccattgaagccaaagagtttgccaagcagttcctggagcgccgtgcc
aaacagaaagcgaaccaccagagacaacagcagcagctgtccaaggaagtctctggattg
aacatgaacttccccctgcagtcaatgttccaggcagctcacatgagtaagggcggcagt
gtgtacgacactcagggaggaaaagcgaagaaaaagcctagcatgatgctccattctgac
cccagtatcctcggctactcattcctggggggaggtgagctggagcaggtggaggattac
tga
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