Puntigrus tetrazona (Sumatra barb): 122352829
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Entry
122352829 CDS
T08985
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122352829 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122352829 (exosc8)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122352829 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122352829
NCBI-ProteinID:
XP_043106458
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Position
10:13571418..13574042
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AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRATTLNISSISTADGSALVKIGNTTVIC
GIKAELTAPPSDAPNKGYIVPNVDLPPLCSSKFRPGPPGEQAQAASQFIADVIESSDLIN
IEDLCIEKSKLCWVLYCDIMCLDYDGNLLDACIIVLLAALKNAQLPEVTINKETDLAEVD
IEKKRPLKINRHPVGSSFAVFDDSIIIVDPTAEEESLSTALLTVVTDEEDRLCAVHKPGG
TSLSGEKLQHCINRAITRNKEISKLVGKVIESTKTAK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaaaaccgcggagcctctggaatatcacaggagctttttgaaagaa
aactgccgtcctgatggaagggaattgggagagttcagagccacaaccttaaacattagc
tctatatctacagccgatggatcagcgttggtgaaaattggaaacacaacagtgatatgt
gggatcaaagctgagttgactgcgccaccatctgatgctcctaataaaggatacatagtc
ccaaatgtagatctgcccccactgtgctcatctaagttcagacccgggccaccaggagaa
caggcccaggcagccagccagtttattgcagatgtcattgaaagttcagatttaataaat
atagaagacctgtgcattgaaaaatctaagctttgttgggtgctgtactgtgatattatg
tgtttggattatgacgggaacttacttgacgcctgcatcatagttctgctggcagcttta
aagaacgcacaactccccgaagtcacaataaacaaagagaccgatttagcagaagttgac
attgagaagaagaggcccttgaagatcaatcggcatccagttggttcatcgtttgcagta
tttgatgactctattatcatagtcgaccctacagcagaagaagaaagcttgtccacggct
ttactgactgtggtaaccgatgaagaggatcgactctgtgccgtccacaaaccaggtggg
acgtcgttatctggtgagaaactgcaacactgcataaatcgagccataacaagaaacaaa
gaaatcagcaaactggtgggaaaagtcattgagagtacgaaaacggcgaaataa
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