Puntigrus tetrazona (Sumatra barb): 122352831
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Entry
122352831 CDS
T08985
Symbol
zgc:100918
Name
(RefSeq) LOW QUALITY PROTEIN: ras-related protein rab7-like
KO
K07897
Ras-related protein Rab-7A
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04137
Mitophagy - animal
ptet04140
Autophagy - animal
ptet04144
Endocytosis
ptet04145
Phagosome
ptet04148
Efferocytosis
ptet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122352831 (zgc:100918)
04145 Phagosome
122352831 (zgc:100918)
04140 Autophagy - animal
122352831 (zgc:100918)
04137 Mitophagy - animal
122352831 (zgc:100918)
04148 Efferocytosis
122352831 (zgc:100918)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122352831 (zgc:100918)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122352831 (zgc:100918)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122352831 (zgc:100918)
04031 GTP-binding proteins [BR:
ptet04031
]
122352831 (zgc:100918)
Membrane trafficking [BR:
ptet04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
122352831 (zgc:100918)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122352831 (zgc:100918)
Exosomal proteins of other body fluids (saliva and urine)
122352831 (zgc:100918)
Exosomal proteins of colorectal cancer cells
122352831 (zgc:100918)
Exosomal proteins of bladder cancer cells
122352831 (zgc:100918)
GTP-binding proteins [BR:
ptet04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
122352831 (zgc:100918)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
Gtr1_RagA
cobW
ATP_bind_1
PduV-EutP
nSTAND3
Septin
AAA_16
AAA_22
NTPase_1
AAA_7
AAA_24
G-alpha
AAA_5
SRPRB
DUF5992
ATPase_2
NB-ARC
NACHT
AAA_14
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
122352831
NCBI-ProteinID:
XP_043106461
LinkDB
All DBs
Position
10:complement(16433329..16437594)
Genome browser
AA seq
205 aa
AA seq
DB search
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFXRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKSNIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPDQIKLRDDRPVSSGDSCSC
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcgtaaaaaggtgcttctgaaggtgatcattctgggggattctggggttggg
aagacttctctgatgaaccaatatgtcaacaagaagttcagcaatcagtataaagccacc
atcggcgcagattttcttaccaaggaggtgatggtagatgacaggctggtgacaatgcag
atctgggacactgcaggacaggagcgcttccagtctttgggtgtggctttttaacgcggg
gcggactgctgtgtgctggtgtatgacgtgaccgcaccgaacaccttcaaaaccctggac
agctggagggatgagttccttattcaggccagccctcgagacccagagaacttccccttt
gtagtgcttggcaacaaaatcgacttggagaacagacaggtgacaacaaaacgagcccag
gcctggtgtcagagcaaaagcaatatcccgtactttgagaccagcgcaaaagaggccatc
aacgtggaccaggctttccaaacgatcgcccgcaacgctctcaaacaggagtctgaggtg
gagacgtacgacttcccagaccagattaaactgagagatgacagacccgtgtcctctggc
gacagctgcagctgctga
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integrated database retrieval system
