Puntigrus tetrazona (Sumatra barb): 122352843
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Entry
122352843 CDS
T08985
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04140
Autophagy - animal
ptet04148
Efferocytosis
ptet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122352843
04148 Efferocytosis
122352843
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122352843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122352843
Membrane trafficking [BR:
ptet04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122352843
Hops complex
122352843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3H2C3
TPR_GEMI5
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
Beta-prop_EML_2
ToxA_N
zf_RING_Vps8
Glyco_transf_10
zf_RING_Vps8_fungal
DLP_helical
Motif
Other DBs
NCBI-GeneID:
122352843
NCBI-ProteinID:
XP_043106481
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All DBs
Position
10:14343560..14349811
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AA seq
927 aa
AA seq
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MAAFLQWRRFVFFDKETVKDTSENGKNFQLPVGIAACDSGRGHIVLGDMDGQIWFLTRSL
QLSSFQAYKLRVTHLYQLKQHNILVSVGQDEPGINPLVKVWNLDKKDSGSPLCTRIFPAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLSLHEGNCPITGLAFR
QAGKVTHLFAATLEKVQCYTLSVKEYPRIELDTHGCALRCSALTDPSQDSQFIVAGDDCV
YLYQPDERGPCFAFDGRKLLTHWHRGYLLLLTHNNKSPSKSDYGGRQTSPTEKHILTIYD
LDNKFIAYSAVFDDVIDVLAEWGSFYVLTRDRTLYMLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDNDGLSEIFRQYGDHLYVKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSNESEVHFDVEIAIKVLRQA
GYHSHAVFLAERHMHHEWYLKIQLEDLKNYQEALRYIGRLPFDQAESNMKRYGKILMHHV
PESTTILLKRLCTDYHPSKDSTDRDSLDRPAENKANPEEFIPVFANNPRELRAFLEHMIE
VDPFSPEGVYDTLLELRLQDWAHEQDPGKKKVLQEAALSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDSEVCLWEQALGYFARKEENCK
AYISEVLQHIDENNLMPPLLVVQTLAHNSTASLSVIKDYLINKLERETQQIEEDERKIRQ
YREETAHLRAEIQELKTCAKIFQKTKCSMCNSPLELPSVHFLCGHSFHQHCLESFAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDHFHRQLKCSNDGFSVIADYFGRGVFNKLTLITD
PPGGKSGAGNLEAEFNRDLLINTKRNV
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcttacagtggagacgttttgtgtttttcgataaagaaacggtgaaagat
acgagcgaaaatgggaaaaatttccaactaccggtgggaattgcggcctgtgattcaggt
cgaggacacattgtgcttggagatatggatgggcagatctggtttttgacccgctccctg
caactgtccagttttcaggcttacaaactgcgggtgacacacctgtaccagctgaaacaa
cacaacatcctggtatctgtgggtcaggatgagcctggcatcaatcctctggttaaggtg
tggaaccttgataagaaggacagcggcagtcctctttgtacccggatatttcctgccata
cctggaaacaaacctactgaagtgtcttgtctaagtgtacatgaaaaccttaatttcatg
gctataggcttcacagatggcagtgtcgtgctgacgaagggtgacatcaccagagacaga
cacagtaaaactctcagcctccatgaaggcaactgtccaatcacaggcctggctttccgg
caggctggcaaagtcacgcacctgtttgccgccactttagaaaaagtgcagtgttacaca
ttatccgtgaaagagtaccctcgtatagaactggacacacacggctgcgccctccgctgc
tcggcgctcacagacccctcgcaggactcacagttcatagtggctggagatgactgcgtg
tacttgtaccagcccgatgagagaggaccctgtttcgctttcgatgggcgcaaacttcta
actcactggcacagaggatacctgctgctgctcacacacaacaacaaatcacccagcaaa
tctgattatggcggcagacagacatcccctacagaaaagcacatcctgaccatttacgac
cttgacaacaagttcatcgcttacagtgcggtgtttgatgatgtcattgacgttctggca
gaatggggctcgttttacgtcctaacgagggacagaacgctgtatatgctgcaggaaaaa
gacacgcagactaagctagagatgctgtttaagaagaacctgtttgtgatggccattaac
ttggctaaaagtcagcatctggacaatgatggtctgtctgagatattcagacagtatgga
gaccatctctatgtcaaaggggatcatgatggagctattcagcagtatattcgcaccatt
gggaagctcgaaccctcatacgtaatccgtaaatttttggatgcacagaggatacataac
ttgacagcgtacctacaggctctccacagacagtcgctggccaatgctgaccacactact
ctactgctcaactgttacaccaaactgaaggacagctccaagctggaagagttcataaag
agcaatgaaagcgaggtgcattttgatgttgagattgccatcaaggtgttacgccaggcc
ggttatcacagtcacgccgtgtttctggcagagagacacatgcaccatgaatggtatcta
aagatccagcttgaggatttaaagaattatcaggaggctttacgctatattggaaggttg
ccatttgatcaagcagagagtaatatgaagcgttacggaaagattttaatgcatcatgtg
cctgaaagcaccactatcctcttaaaacgcctttgcactgactatcaccccagcaaagac
tcaaccgacagggacagtctggacaggcctgcagaaaacaaggccaatccagaagagttc
atcccagtatttgccaataacccacgagagctgcgagcgttcctggaacacatgatcgaa
gtggatccgttctcacctgagggagtttatgacactctgctagagctcagacttcaggac
tgggcacatgagcaggacccagggaagaagaaagtcctgcaggaggcagcactgtccctg
ctgaggagcgacaacaccgtgtttgacaaagccctggtgctctgccagatgcacaacttc
aaggaaggagtgctgtatctgtatgaaaagggcaaactgtaccagcagatcatgcattac
cacatgcagaatgaggagtatgggaaagtcgtggaggcctgtaaacgctatggggacagt
gaagtgtgtttgtgggaacaggctctaggctattttgcacgcaaagaagaaaactgtaag
gcctacattagtgaagtcctgcagcacattgatgaaaacaacttgatgcctccacttctg
gtggtgcagactttggctcataattccacagcatctctctcagtcataaaagactacctg
ataaataaactggagcgggagacccaacagatcgaggaagatgaaagaaagattcgacag
tatagagaggaaacggcccaccttcgagctgagatacaggaacttaaaacctgtgcaaag
atcttccaaaagaccaagtgcagcatgtgcaacagcccactagagctgccgtctgtgcac
ttcctgtgcggtcactctttccatcagcactgcctggagagctttgcagagagcgaggcc
gagtgccccacctgcacccctgagaacaggaaagtgatggacatgttgcgtgcgcaagat
cagaaacgagatcttcatgatcattttcacagacagctcaaatgctctaacgacggcttc
tctgtcatcgctgactattttggccgtggagtgtttaacaaactcactctgattacggat
cctccaggaggaaagagtggagctggcaatctggaggctgaattcaacagagatctgctc
attaacaccaagagaaatgtttga
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