Puntigrus tetrazona (Sumatra barb): 122352981
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Entry
122352981 CDS
T08985
Symbol
snx18b
Name
(RefSeq) sorting nexin-18b
KO
K17923
sorting nexin-9/18/33
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122352981 (snx18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122352981 (snx18b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
122352981 (snx18b)
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
122352981 (snx18b)
Macropinocytosis
Sorting nexins
122352981 (snx18b)
Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122352981 (snx18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_1
SH3_2
Vps5
XFP
DDE_3
V-SNARE
Motif
Other DBs
NCBI-GeneID:
122352981
NCBI-ProteinID:
XP_043106720
LinkDB
All DBs
Position
10:844155..847891
Genome browser
AA seq
563 aa
AA seq
DB search
MALRARALYDFISENPGEISVTESELLTLCSEEVVDGWLEGTNSRGETGLFPASYVEIVR
TDASLHGNGTSAGHDYYCQTSPQGRDTSNESTPTHSAAYQGQLQQQRHSFQTSQGSDEDW
DDDWDDGVTADEHGTPEKRGNAQAGYPVTSSSASRRGSAQQSKSTGTVGKNLNRFSTFVK
SGGEAFVLGEASGLVRDGDKIFVVMGQFGPEWQENPYPFACTIDDPTKQTKFKGMKSYMS
YGLTPSHTQSQVNRRYKHFDWLYARLVEKFPVISVPHLPEKQATGRFEEDFISKRRKGLI
WWMNHMTSHPILSKCDVFQHFLTCSSTDEKAWKQGKRKAEKDELVGANFFLTICPPASPL
DLQEVESNVDAFKTFTKKMDENILQLNVTINEFARKQITGFKKEYQRVGQAFRLLSQAFE
FDQQAYSAPLNKAMVHTGDVYETIGDYFAEQPRQDLEPISDLLAIYQGHLANFPDIIHVQ
KGALTKAKESQKHGEEKDGIAGGGIHDRCNIISCATLAEIQHFHRVRVRDFKAQMQHFLQ
QQISFFQKITGKLEEALDMYDQA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcagagccagagctttatacgacttcatctctgaaaaccccggcgagatctcg
gtgacagagagcgaacttctcactctgtgcagcgaagaggtggtcgacggttggttggag
ggcacgaacagcagaggcgagacgggactcttccccgcgtcgtacgtggagatcgtcagg
actgacgcgtcactgcacggtaacggcacatccgccggtcacgactattactgccaaact
agtcctcaggggagggacacctcgaatgaatcgactcccacccattccgctgcttaccag
gggcaacttcagcaacagcgacacagttttcagacgagccagggaagcgacgaggactgg
gacgatgactgggatgacggcgtgacggcggatgagcacgggacacctgaaaaacgcggg
aatgctcaggcgggatatcccgttactagctcctcggcttcccgacgcgggagcgcgcag
cagtccaaaagcacgggcacggttgggaaaaacctcaataggttctccaccttcgtgaag
tcgggcggcgaggcgttcgttttgggcgaagcttcgggtttggtcagagatggagacaaa
atatttgtggtgatgggccagttcggtccggagtggcaggagaacccgtatccgttcgct
tgcaccatcgacgaccctacaaagcagaccaaattcaaaggcatgaagagctatatgtcc
tacggactcacgcctagtcacacgcaaagccaggtgaatagaagatacaagcacttcgac
tggctctacgcccgacttgtagaaaaattccccgtcatttcggtccctcacctgcctgag
aaacaagccacgggtcgattcgaggaggatttcatttcgaagaggaggaagggtttaata
tggtggatgaatcacatgacaagtcatccgattctatccaagtgcgacgttttccagcat
tttctcacctgcagcagcactgatgagaaagcttggaagcaaggcaagcgaaaggcagag
aaggacgaactggtcggcgctaacttcttcctcactatctgtcctccagcttcgcctctc
gacttgcaagaggtggagagcaacgtagacgctttcaaaacgttcaccaagaaaatggac
gagaacatcctgcagctcaacgtcactattaacgaattcgccagaaagcagatcactggt
tttaaaaaggagtatcagagagtcgggcaggctttcagacttctgagtcaggccttcgaa
ttcgaccagcaagcatattcggcgccgttaaacaaggccatggtgcacaccggggacgtc
tacgagaccatcggggactactttgcagagcagccccgtcaagatttggagccgatttct
gatcttttagcgatttaccagggccacctcgcaaactttccagacattatccatgtccag
aaaggagccctcacaaaggccaaggagagccagaagcacggggaggaaaaagacggcatc
gccggcggaggcatccacgaccgctgcaacatcatctcctgcgctacgctcgccgagatc
cagcactttcatcgcgtgcgcgtgcgggacttcaaggcacagatgcagcatttcttacag
cagcagatcagcttctttcagaaaatcacaggcaagttggaggaagccttggacatgtac
gaccaggcctag
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