Puntigrus tetrazona (Sumatra barb): 122352988
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Entry
122352988 CDS
T08985
Symbol
smarcad1b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1b isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122352988 (smarcad1b)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122352988 (smarcad1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
HHH_3
MEF2_binding
Motif
Other DBs
NCBI-GeneID:
122352988
NCBI-ProteinID:
XP_043106735
LinkDB
All DBs
Position
10:complement(5396522..5412369)
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AA seq
957 aa
AA seq
DB search
MRRKKGAASSNHVDPSAESDTIIPETPETQRPSGSSLSTALSDSDSDSDIEILGSSMMPV
RQEESEKIVLSSDDEMSLSDEEEVTVVKIERRPKHSRTTRSTSKALKTQQKGSRMVTNST
LPSPLKTSGMAAADSVHERRQQQMCGASQESDSSHRRGKRRASAVDDLEEKGLEPISKDQ
ERMLRKLQRKFPHLNKNELRDVLQEHSWLIDDALETLRMFSDLEVESEDDSSQISTAAKR
TRRGASTCQQAQVVQLPSPPQPKPHRPLDRTKTSQRSEKQSIVSKTIYVSSEEECSDSEA
SLVNVLLDSDSDQSEETLSKLKSEILSFFQSASVDELTLIAGCSLKKAQKITELRPFKKW
KNLDDVMHRGNGLSTELLAGCREVLKEREVVKGLMSKCEDISVKLIQDVTQVMNKGPGSM
SQPQILTSTFQLKPYQLIGLNWLALLHQNTLSGILADEMGLGKTIQTISFLAYLYQEGNH
GPHLITVPASTLDNWVRELKLWCPSLKVLVYYGSAEDRKYMRYEILNKIVDYNIIVSTYN
LAIGNSSDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAINAKYRLLLTGTPLQNNLL
ELMSLLNFIMPNMFSSSTSQISKMFSMKSSEEQSSFERDRITHAKLIMKPFILRRVKSEV
LKQLPAKEEQVEFCAMSEKQQELYNNLFHKLKHSSNGEKRELTNVMMQLRKMSNHPLLHR
HYYTTEKLKVMSRLMLKEPSHRDADPALIKEDMEVLSDFELHRLCQQYSALQEYQLDTDI
LLDSGKLGLLAQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYNRLDGSTPMSDR
IGLIDEFNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEGRCHRVGQT
RTVKVIKLISKDSIEDAMLRIGERKLKLEQDMTATQEGEEDTLPDDVTSLLKASLGL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaaagaaaggagcagcatcctctaatcatgtggatccctcggcagagtcagac
actatcattccagagactcctgaaacccaacgtccatcaggatcatctctctccactgcc
ctttctgactctgactctgactctgatattgagatattaggcagttccatgatgccagtc
aggcaagaagagtctgagaaaatagtgctgtcatctgatgatgagatgtcactgtctgat
gaagaggaagtaactgtggtgaagattgagaggaggccgaagcacagcaggacaacaaga
tctacctcaaaagctctaaaaacacaacagaaaggatcacgtatggtgaccaacagcacg
cttccctcgcccctgaagacgtctgggatggcagcggctgattcggtccacgagaggaga
cagcagcagatgtgtggcgcttcccaggagagcgacagctcccatcgcaggggcaagagg
cgggcttctgcggtggatgatttagaggagaaggggcttgagccgatatctaaagatcaa
gagcgtatgctgagaaaacttcagagaaagtttccccatctaaacaagaatgaactcagg
gatgtgcttcaggaacatagctggctaattgacgatgccttggaaacactacgaatgttc
tctgaccttgaagttgagtctgaggatgactcctctcaaatttccactgctgccaaacgc
accagacggggcgcaagtacttgtcaacaagctcaggttgtccaacttcccagcccaccc
caaccaaaaccacacagacctcttgacaggaccaaaacatctcagaggagtgaaaagcag
tcgatagtgtccaaaaccatatatgtgagctcagaggaggagtgcagtgactctgaggcc
tctctggtgaatgtattactggactctgactctgaccagtcagaggaaaccctatccaaa
ctcaaatctgagatcctcagcttttttcagtccgcttcggtggatgagctcacactcatt
gcaggatgctctttgaagaaggctcagaaaatcactgagctgagaccctttaaaaaatgg
aaaaacctggatgatgtcatgcacagaggaaacggtctgtccactgagctgctggcagga
tgtcgggaggttctgaaggaaagggaagttgttaaaggtctcatgagcaagtgtgaggac
atatcggtaaaactgatccaagatgtgacccaagtgatgaacaagggcccgggttctatg
agccaacctcagatcctcaccagcacattccagctgaaaccataccaactgattgggctg
aactggctggctttactacatcagaacacactcagtggaatcctggcagatgagatgggc
ttagggaagaccattcagaccatctcgtttctggcctacctttatcaggaaggcaaccat
gggcctcatctcatcaccgttcctgcttctacacttgataattgggttcgggaactgaaa
ctgtggtgccccagtctcaaagtgctggtatattatgggtctgctgaggatcgcaagtat
atgcgctatgagattttgaataaaatagtggattacaacatcatcgtctccacttacaac
ctggctattggaaatagcagtgaccgcagtctgttctgcaagctcaagttggagtatgct
gtgttcgacgaaggccacttgctgaagaacatgaactcactgcgctaccgacacctcatg
gccatcaacgctaaatatcgtctgcttctcactggaacccccctgcaaaataacctcctg
gagctcatgtccctgctcaacttcatcatgcccaatatgttctccagcagcacttcacag
atctccaagatgttctcaatgaaatcttcagaggagcagagcagctttgagagggacagg
atcacccatgccaagctcatcatgaaacccttcatcctcagacgtgtgaagagcgaggtc
ctgaagcagctgcctgccaaagaggagcaggttgaattttgtgccatgtccgagaagcag
caggaactgtacaacaatcttttccacaaactgaagcattccagtaatggggaaaaacgc
gagctgaccaatgtgatgatgcagctgaggaagatgtccaaccatcctcttcttcaccgc
cattattataccacagaaaaactcaaagttatgagcagactcatgctcaaggagcctagt
caccgtgacgcagatcccgctctcatcaaagaggacatggaggtgctctcagacttcgag
ttgcaccgcctctgtcagcagtattctgcactgcaggaataccaactcgacacagacata
cttctggactctgggaagctcggcctcctcgcacagctgctgaactccctgaaggagaag
ggtgatcgagtggtgctgtttagccagttcacaatgatgctggacattctggaggtcttc
ctgagacatcataagcacagatacaaccgactggatggttcaacccccatgagtgacaga
attgggctgattgacgagttcaacacagaccaggatatatttgtgttcctgctgtccacc
agagccggaggactaggcattaacctgacttcagccaatgtggtcatccttcacgatatc
gactgcaacccttacaatgacaaacaggccgagggacgctgccaccgggtgggacaaacc
aggacggtgaaggtgatcaagttgataagtaaggactccatagaggatgccatgctccgc
attggagaaagaaaactcaaactagagcaggacatgaccgcaactcaggagggtgaagag
gacacattacctgacgatgtgacctcgctgctcaaagcttcgcttggactctga
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