Puntigrus tetrazona (Sumatra barb): 122353017
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Entry
122353017 CDS
T08985
Symbol
tmtops3b
Name
(RefSeq) teleost multiple tissue opsin 3b
KO
K04256
c-opsin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptet01009
]
122353017 (tmtops3b)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ptet04030
]
122353017 (tmtops3b)
Protein phosphatases and associated proteins [BR:
ptet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122353017 (tmtops3b)
G protein-coupled receptors [BR:
ptet04030
]
Rhodopsin family
Vision
Opsin
122353017 (tmtops3b)
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Ortholog
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GFIT
Motif
Pfam:
7tm_1
Bac_rhodopsin
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
122353017
NCBI-ProteinID:
XP_043106787
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Position
10:10257373..10261276
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AA seq
378 aa
AA seq
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MVTVRYLMVLRESSENGSQLDTLTPVDLPEFSRTGFNVVAVCLGVIFAFGFLNNFLVLAV
FARFHVLRTPINLILLNISVSDMLVCVFGTPLSFAASVHGRWLTGVHGCRWYGFANALFG
IVSLVSLAVLSYERYSTILCCSKADVSDYRKAWLFIACCWLYSLLWTVPPLFGWSSYGPE
GPGTTCSVQWNQRSLETRSYVICLFVFCLLLPLLLMVYCYGKILIAIHGVAKINQTAAQR
RETHVLVMVVSMVSCYLLCWMPYGVVALLGTFSAGIVSPTASVVSSVLAKSSTVLNPIIY
ILFNNQFYRCFTALIRCGPEPPAHLTLHTEEVGAQQDCIAMGSYGTTSPPDTPDKFGSQR
ASVPQTNRTLVLVVHCTS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccgtccgctatctgatggtcctcagagagtcctcagagaacggcagccagctg
gacacgttgactcccgtagatctgcctgaattcagccgcacgggattcaacgtagtggcc
gtgtgtttgggagtaattttcgcgttcggtttccttaacaactttcttgttcttgcggtc
ttcgcccgcttccacgtcctgaggactccgatcaacttaatactgctgaacatcagcgtg
agcgacatgctcgtttgtgtgtttgggacacctttaagcttcgccgcgtctgtgcacggc
cggtggctgacgggagttcacggctgcaggtggtatggctttgccaacgcactgttcggt
attgtttcactggtatcccttgcggtgctgtcatacgagcgttacagcaccattctctgc
tgttcaaaagcagatgtatctgactacaggaaggcctggctcttcatcgcatgctgctgg
ctgtactctctcttgtggacagtgccaccactcttcggctggagcagctacggtcctgag
ggacccggcaccacctgctcagtccagtggaaccagcgttccctggaaacaagatcttac
gtcatctgcctctttgtcttttgtctgctgctgcccctgcttctgatggtctactgctac
gggaagatcctcattgccattcacggggttgctaagatcaatcagacagctgcacagagg
agggaaacgcacgtgctggtgatggtggtttccatggtgtcctgttacctgctctgttgg
atgccgtacggggtcgtggcattgcttggcacgttcagtgctggtattgtcagcccaaca
gccagcgttgtatcatccgtactagcaaagagcagcactgttctgaaccccatcatctac
attctgttcaataaccagttttacaggtgctttacagctttaataagatgtggaccagaa
cctccagctcatctcacccttcacacagaagaagttggtgctcaacaggactgcatcgct
atggggtcatatggtactacttctccacctgacaccccagacaagttcgggtcccagagg
gcttcggtaccacaaactaataggactttggtgcttgtggtgcattgcacttcgtaa
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