Puntigrus tetrazona (Sumatra barb): 122353554
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Entry
122353554 CDS
T08985
Symbol
cdh4
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122353554 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122353554 (cdh4)
Cell adhesion molecules [BR:
ptet04515
]
Cadherins
Major cadherins
122353554 (cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
Cytomega_TRL10
Orf78
Motif
Other DBs
NCBI-GeneID:
122353554
NCBI-ProteinID:
XP_043107265
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All DBs
Position
11:18984091..19165675
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AA seq
931 aa
AA seq
DB search
MAKMKTGCAILVACALVAGTSLGSHGNAQTIAPCRPGFSQSFYTVFVPRGVLQGLNIHKD
TLLSSGHVKFETCQQIEEVSFESSDPKFSIRRDGSLYAGQHVTNLTEPIQFMVTARDRAG
NYIWETTVKLALAGHLLSPPVNQFAGDGIYGGSSHNHYQNPRLITFPRQHQRGSSNGLRR
QKRDWVIPPINVPENSRGPFPQVLVRIRSDQDKEIEIRYSITGAGADQPPNDVYIIDPVT
GKMSVTKPLDREERASYHLRAHAVDINGNQMEPPIDLYIYVIDMNDNRPEFKNQVYNGSV
AEMSKPGTSVMQVTAFDADDSTTANGLVHYRILSQTPHIPIPNMFTINGATGEISTIATG
IDREKVSQYSIIVQATDMEGSLNFGLSNTATALISITDINDNPPELDSKTFLGEVPENAV
GVVVANLTVRDKDQPHTPNWNAVYRITGGDAMGHFAIRTDEVTNDGKVIVVKPVDYERND
AFTLMVVVTNQAHLASGIPSSPSSSAAVSIKVLDVNEAPVFPSNPKIIRFEEGVPADTTL
ATFAALDPDRFIQQTIRYSKLSDPANWLKINRTNGRITTTAVLDRESPYMKKNVYEATFL
AVDNGSPPATGTGTLQIYLIDVNDNVPVLVPQEALVCERSRHGYPVNITASDLDSEPNAG
PYVFELPSYPSSARRNWTISRLNGNYAQLKLRIPYLEAGMYRVPILVSDSGNPPLSNTSV
LKVKVCPCDENGDCTVIGXVTVAGLGTGAIITILICIIILLSMVLFFVVWVKRREKERQT
KPLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIMSKPAGVRRVDERPVI
LESQYPVRPTVPHPGDIGEFIIDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLDS
SSSGEQDYDYLNDWGPRFKKLADLYGGGGED
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaatgaaaaccggctgcgcgattcttgtggcgtgtgccttagttgcgggcacc
tctttggggagtcacggaaacgctcagaccatcgctccatgcagaccaggtttctcccag
agtttctacaccgtatttgtccccaggggtgtgctgcaaggcctgaacattcacaaagat
accctgctgtcatctggccatgtgaagttcgaaacctgtcaacaaatagaggaggtatct
ttcgaaagcagtgacccaaagttcagcattcggcgggatggctctctttacgcagggcaa
catgtgacgaatctaactgaacctatccagttcatggtgacagccagagacagagcgggc
aactatatctgggagaccactgttaaactggccctcgctggacacctgctatcacctccc
gttaaccagtttgctggggatggtatttatggcggatcctcccacaaccactatcaaaat
cccagactcattacgtttccacgacaacaccagcgaggctcgtccaatggactgcggcga
cagaagcgagactgggtcattccaccaatcaacgtgcctgaaaactccagaggacccttc
cctcaagttctcgtcaggattcgatcagaccaggataaagagattgagattcggtatagt
ataacaggagccggagcagaccaacctcccaatgacgtctacattattgatcctgtgaca
gggaaaatgtctgtcactaaacctttggacagagaggagagagcctcctaccatctcaga
gctcatgcagtggatattaacgggaaccaaatggagccccctattgatctgtacatttat
gtcattgacatgaatgacaacagacccgagtttaagaaccaggtctacaacggatcagtt
gcagaaatgtccaaaccaggcacttctgtaatgcaggtaacggcctttgacgccgatgac
agcaccacggcaaacgggctggtgcactatcgcatcctgagccagacaccacacatcccc
attcccaacatgtttactattaatggagccactggagagatcagcaccatcgctacaggc
atcgatagagagaaagtgtctcagtacagcatcatagtccaggccaccgatatggagggc
agcctaaacttcggcctttccaacaccgccacggctctcattagcatcactgacatcaac
gataaccctccggagctggactctaaaacattcctaggagaggtcccagagaatgctgtg
ggtgtggtggtggccaatttgacagtaagagacaaggaccagcctcatacaccaaattgg
aacgccgtctataggattacaggaggagatgcgatgggccatttcgctatacgcactgat
gaggtcaccaatgacggcaaggtcatagtggttaagccggtggactatgagaggaacgat
gccttcacgctgatggtggtggtcaccaaccaagctcacctggccagcgggatcccctcc
tcgccgtcctcatctgctgctgtttccatcaaagtactggatgtcaacgaggcccctgtc
ttcccgtccaaccctaaaatcatccgttttgaagagggagtgcctgctgacaccaccctc
gctacttttgctgcactggatccagaccgcttcatccagcagactatcaggtactccaaa
ctgtcagatccagccaactggctgaaaatcaacaggaccaatggaaggattaccaccacg
gcggtgctggaccgtgaatcaccgtatatgaagaaaaacgtgtatgaagcgacctttttg
gcggtggataatggttcccctcctgccacaggaactggcactctccagatttatttgata
gatgtgaacgacaacgtgcctgtattagttcctcaagaggctctggtctgcgagaggtca
cggcacgggtatccagtcaacatcacagcctcggatttagattcagagcccaacgccggc
ccgtatgtctttgagctgccctcttacccctcttctgcccgccgtaactggaccatttca
cgcctgaatggtaattatgcccagctgaaactccggatcccatacctggaggcgggcatg
tacagagttcccatcttagtttccgactcgggaaaccctccgctgtccaacacctctgtc
ttgaaggtgaaggtgtgtccctgtgatgaaaacggagactgtactgtgatcgggncagtg
actgtggccgggctggggacaggagccatcatcaccatcctcatctgtatcattatactg
ctcagtatggttctgttctttgtggtgtgggtgaagcgaagggagaaggagcgtcagacg
aaacccttattgatcgaccctgaggatgacgtcagagataatatcctgaagtatgatgaa
gagggaggaggagaggaagatcaggactatgatctgagtcagctgcagcagcccgagtct
ctagatcacattatgagcaagcctgcaggtgtgcggagagtggacgagagacccgttatc
ctagaatctcagtaccctgtccggcccacggtgccacacccaggggacatcggcgagttc
atcattgacggcctgcgcgcggcggataacgaccccactgctcctccctacgactccctg
ctggtgtttgactacgagggcagcggctccacagcgggctccgttagctccctggactcc
tccagctctggagaacaggactacgactacctcaatgactggggtcctcgcttcaaaaag
ctggcagacctctacggaggagggggagaggactga
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