Puntigrus tetrazona (Sumatra barb): 122353836
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Entry
122353836 CDS
T08985
Symbol
sptbn1
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04517
IgSF CAM signaling
ptet04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122353836 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122353836 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptet04812
]
122353836 (sptbn1)
Cytoskeleton proteins [BR:
ptet04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122353836 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
122353836 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
SCAR_helical
Motif
Other DBs
NCBI-GeneID:
122353836
NCBI-ProteinID:
XP_043107645
LinkDB
All DBs
Position
11:12375113..12466443
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAAEFDHMDIQQQYQDSVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVLAV
VAVAKELEAENYHDIKRIAARKDNVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNANAQRFAVDEEGY
KPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDCGKDLTGAVRLLSQHRALEDEMSGRAGHLQHTVREGQAMADAGHFGEDKIRERIAD
VQAQWAALEQLAAVRKKRLEEACSLHQFQADADDVDAWTLDALRIVSTADVGHDEFSTQA
LVKKHKDASAEVASYRPVIDALHEQAQSLPPEQVQAANVNERLAGIEERYKEVSELTRLR
KQALQDALALYKMFSEADACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLIHSGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLHSALGVQNYH
LDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEAER
LAGEHPDQAKAITGRLAEITAVWEEMKETLKNREASLGEASKLQQFLRELDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLAQHEGIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQIFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEDKINGVVEAGRRLASDGNINADRIQERAASIDDRHKKNR
EAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLDKIEKEGKQLVSEKPETEAVVKEKLAALQKMWTELETTTQTKAQCLFDANK
AELFTQSCADLDKWLVGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVEELQS
QAHVLRQEGKDTDEVDGRRKVVELKFKELLDPLQKRKDFLMASREIHQFNRDMEDEILWV
EERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRCDDILERSQSILKADSPNVES
IRARLSDLQQLWSLIIQETEKRHTRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVAANHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLEERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNRMADDLINAGHADAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAVRLQSAYAGDKADDIQRREGEVLEAWRSLLEACEGRRTRLLDTGDKFRFFSMVRD
LMLWMEDVIRLIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKH
YASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
RELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRRKPPT
PDPVQAQDAETQQREGEQIAQNGLPSDQDSPRDGVDGEMNGVPERSSKEPSPIPSPSADR
RGKGSQSATLPAKGQETPSAQLEGLLHRKHEWEGHNKKASSRSWHNVYCVINNHEMGFYK
DNKSAAQGIPYHSEIPISLKEAVCEVAVDYKKKKHVFKLRVTDGNEYLFQAKDDEEMNTW
IQAIQNAGSGSSSSEKSEITPSNQSTPASSRAHTLPATVTLTSESSPGKREKDKEKDKEK
RFSLFSKKKQ
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtagccgcagaattcgaccacatggacatccagcagcagtaccaggacagc
gtcaacaaccgctgggatgacgagtgggacaacgagaacagctcggcccggttattcgag
cgctcgcgcatcaaggctctggcagacgagcgagaggccgtgcagaagaagaccttcact
aaatgggtgaactctcacctggcgcgagtgtcctgccggatcacggacctctacatggac
ctgagagacggacggatgctcatcaagctgctggaggtcctgtccggagagagactgccc
aagccgacgaagggccgcatgcgcatccactgcctggagaacgtggacaaggccctgcag
ttcctcaaggagcagcgcgttcatctggagaacatgggctcgcatgacatcgtcgacgga
aaccaccgactcacgctcggcctgatctggaccatcatcctccgcttccagatccaagac
atcagcgtagagacggaagacaataaagagaaacgctccgccaaggacgcgctgcttctg
tggtgccagatgaagaccgcaggctatcccaacgtcaacatccacaacttcaccaccagc
tggcgggacggcatggctttcaacgccctcattcacaagcacaggccagacctgattgat
ttcgacaagctgaagaagtccaacgctcactacaacctgcagaacgccttcaacctggcc
gagcagcacctgggcctcaccaaactcctggacccagaagatatcagcgtggaccacccc
gacgagaagtccgtcatcacttacgtcgtcacctactaccactatttctccaagatgaag
gcgctgaaggtggagggcaagcgcatcggaaaggtgctcgacaacgccatcgagactgag
aagatgatcgagaaatacgaatctctggcgtctgacctgctggagtggatcgagcaaacc
atcatcatcctcaacaaccgcaagttcgccaactctctggttggagtccagcagcagctt
caggccttcaacacttaccggacggtagagaagccgcccaaattcactgagaaaggcaac
ctggaagtgcttctcttcacgatccagagcaagatgagggccaataaccagaaagtgtac
atgccacgagagggcaaactcatctcagacatcaacaaggcgtgggagcgtctggagaag
gccgagcacgagcgagagctggcgctgaggaccgagctgattcgacaggagaagctggag
cagctcgccagacgcttcgaccgtaaggcggccatgagagagacctggctgagcgagaac
cagcgcctcgtctcccaggacaatttcggattcgacctccaggcggtcgaggcagctacc
aaaaagcacgaggccatcgagacggacatcgcggcgtacgaggagcgcgtgctggcggtg
gtggccgtggctaaggagctggaggcggagaactaccacgacatcaaacgcatcgccgcg
cgcaaagataacgtgctgcgtctctgggagtatctcctggagctgctcaaggcccgcaga
cagcggctggagatgaacctcggcctgcagcgcgtcttccaggagatgctctacatcatg
gactggatggacgagatgaagatgctgctgctgtctcaggattacgggaagcacttgctg
ggagtggaagatctgctgcagaagcacgctctggtggaggccgacatcgggattcaggcc
gaccgcgtcaaagccgtcaacgccaacgctcagaggttcgccgtggatgaggagggctac
aaaccctgtgaccctcaggtcattcgtgaccgagtggcccacatggagttctgctaccag
gagctgacccagctagcggccgagcgccgggcccgtctggaagagtcccgccgcctctgg
aagttcttctgggagatggccgaggaggagggctggatccgcgagaaagagcagatcctg
tcctcggacgactgcggcaaggatctgacgggcgccgtgcgtcttctgagtcaacaccgc
gccctggaggacgaaatgagcgggcgagccggtcacctccagcacacggtgcgcgagggt
caagccatggccgacgccgggcacttcggcgaagataagatccgcgagcgcatcgccgac
gtccaagcgcagtgggccgctctggagcagctggcggcggtgaggaaaaagcgcttggag
gaggcctgcagccttcaccagttccaggccgacgcggacgacgtcgacgcctggactctg
gacgcgcttcggatcgtctccacggctgacgtcggccacgacgagttctccactcaagcg
ctggtcaagaagcacaaagacgcctcggccgaggtggccagctaccgcccggtcatcgac
gcccttcacgaacaggcccagtcgcttcctccggagcaggtgcaggcggctaacgtcaac
gagcggctggcgggcatcgaggagcgctacaaggaggtctcggagctgacccggctgagg
aaacaggccctgcaggacgccctggcgctctataagatgttcagcgaggcggacgcgtgc
gagctctggatcgacgagaaggagcagtggctcaacagcatggagatcccggagaagctg
gaggacctggaggtcattcagcacaggttcgagagtctggagcccgaaatgaataaccag
gcctcacgcgtggccgtagtcaatcagatcgccaggcagctcattcacagcggacacccg
agcgagaaagacatcaaagcccagcaagacaaactcaacaccaggtggagtcagttccga
gacctggtggaccagaagaaagagtccctccactctgctttgggcgtccagaactaccac
ctggactgtaacgagaccaaatcctggatccgcgagaagaccaaagtcatcgagtccacc
caggagctgggcaacgacttgacgggcgtcatggccctccagcgcaagctcaccggcatg
gagcgcgacctggccgccatcgaagccaaactgggcgacctccgcggcgaggcggagcgc
ttggccggagaacaccccgaccaggccaaagccatcacgggacggctggccgagatcacc
gccgtttgggaggagatgaaggaaaccctcaaaaaccgcgaggcgtctctcggggaggcc
agcaagctgcagcagttcctccgagagctggacgatttccagtcctggctttcccgcacg
cagacggccatcgcgtccgaggacatgcccaacacgctggccgaggccgagaagctcctg
gcccagcacgaaggcatcaagaacgagatcaacaactacgaagaggactaccagaagatg
agggacatgggcgagatggtgacgcaggggcagacggacgctcagtacatgttcttgaga
cagaggctccaggctctggacaccgggtggaacgagcttcataagatgtgggagaaccgg
cagaacctcctgtctcagtctcacgcctatcagatcttcctcagagacaccaaacaagcc
gaggctttcctcaacaaccaggagtacgttctggctcataccgagatgcccaccaccctc
gaaggagcagaagctgccatcaagaagcaggaggacttcatgaccaccatggacgccaat
gaggacaagattaacggagtggtggaggccggaaggagactggccagtgacggaaacatc
aacgccgaccgcatccaggagagagcggcctccatcgatgaccgccacaagaagaaccgt
gaagcggccgtggagctgctcatgaggctgaaggacaacagagacctgcagaagttcctt
caggactgccaggagctgtccctgtggatcaatgagaagatgctgacagcacaggacatg
tcctacgatgaagctcgtaacctgcacagcaaatggctcaaacaccaggccttcatggcc
gaactgcagtccaacaaagaatggctggacaaaatcgagaaggaagggaagcagctggtc
tcggagaagccggagacagaagctgtagtgaaggagaagctggcggcgctgcagaagatg
tggaccgagctggaaaccacgactcagactaaagcccagtgtctgtttgacgccaacaaa
gccgagctcttcacgcagagctgcgccgatctggacaaatggctggtgggcctggagggt
cagatccaatcggacgactacggcaaagatctgaccagcgtcaacatcctgctcaaaaaa
caacagatgctggagaaccaggtggaggtgcgtcagagggaggtggaggagctccagtct
caagctcatgtgttgagacaggagggaaaggacacagatgaagtcgacggccgcaggaag
gtggtggagctgaagtttaaggagctgctggatccgctgcagaaacggaaagacttcctc
atggcctctcgtgagattcatcagtttaaccgcgacatggaggatgagattctctgggtt
gaggagcggatgcctctcgctacatcaacagaccacggccacaatttacagaccgttcag
ctgcttataaagaagaaccagacgctgcagaaggagatccagggccatcagccgcgctgc
gacgacatactggagcgcagccagagcatcctgaaggccgacagtcccaatgtggaatcc
atccgagcccgtctgtccgacctgcagcagctctggagcctgatcatccaggagacggag
aagcgccacaccagactcgaggaggcccataaggcccagcagtactactttgacgcggcc
gaagccgaagcctggatgagtgagcaggagctctacatgatgtctgaagagaaagccaag
gatgagcagagttcggtggccatgctgaagaagcatcagatcctggagcaggcggtggag
gactacgccgaaaccgtgcaccagctctccaagaccagccgaggcctggtggccgccaac
caccccgagagtgagaggatcggcatgcgtcagtctcaggtggataagctgtacgccgga
ctcaaggacctctcagaggagaggagaggcaagctggaggagcgcttccgcctcttccag
ctcaaccgggaggtggatgatctggagcagtggatcgctgagagagaggtggtggctgga
tctcacgagctcggacaagactacgagcacgtcactatgttgcaggagcgtttccgtgaa
ttcgctcgtgacacaggaaacatcggtcaggagcgcgtggacggtgtgaaccggatggcg
gacgatctgataaacgcagggcacgctgacgcagcgactgtggccgagtggaaggacggt
ctgaacgaggcctgggccgatctgctggagctcatcgacacgcgcacgcagatcctcgcc
gcatcctacgagctgcacaagttctaccacgacgccaaggagattctgggacgcatcctg
gacaagcataagaagcttccggaagagctgggccgagaccagaacacggtggaaaccctg
cagaggatgcacaccacgtttgaacacgacattcaagctcttgggacacaggtcaggcag
ctgcaggaggacgccgtgcgtctgcagtcggcgtacgccggggataaagcggacgacatc
cagcggcgcgagggagaggtgctggaggcctggaggagtctgctggaggcctgcgaagga
cgaaggacccgactgctggacaccggagacaagttccgcttcttcagtatggtgcgggac
ctcatgctctggatggaggacgtcatccgcctcatcgagacgcaggagaagcccagggat
gtgtcgtctgtggagcttctcatgaacaaccaccagggaatcaaggctgaaatcgatgct
cgtaatgacagttttacggcctgcatcgagctgggcaaatctctcctggcacggaaacac
tatgcatcagaggagatcaaagaaaagttgttgcagttgacggacaagaggaaagatatg
attgacaagtgggaggacagatgggagtggcttagactgattctggaggtgcaccagttc
tcacgggacgctggcgtggccgaggcgtggctgctgggacaggaaccgtacctctccagc
agagagctcggacagagcgtggacgaggtggagaagctcatcaaacgccacgaagccttc
gagaaatcagccgccacctgggaggagcgcttctcggcgctcgagagactgactacgttg
gagttattggaagtgagaagacagcaagaggaggaagagaggaggaggaaaccgcccacg
ccggatccggtccaggcacaggacgctgaaacacagcagagagaaggagagcagattgcc
cagaacggactgccatcagaccaggactctccacgggatggagtggacggagagatgaac
ggagtgcctgagaggagctcgaaggagccgagtcccatcccgtctccgagcgcagacaga
cggggcaaaggcagccagtcggccacgctgccggcgaagggtcaggagacgccgtctgcg
cagctcgagggactcctgcaccgcaaacacgagtgggagggacacaacaagaaggcctcc
agcagatcctggcataacgtgtactgcgtcatcaacaaccacgagatgggcttctacaaa
gacaacaagagcgcggcgcagggcatcccgtaccacagcgagatccccatcagcctgaag
gaggccgtctgcgaggtggccgtcgactacaagaaaaagaagcacgtcttcaagctcaga
gttactgatgggaacgagtatctcttccaagccaaagatgatgaggagatgaacacgtgg
atccaggccattcagaacgcgggcagcggctcgtcgtcctccgagaagtccgagatcacg
ccgagcaaccagagcacgccggcctcgagccgcgctcacacactcccggccaccgtgacc
ctgacgagcgagtccagccccggcaagcgcgagaaggacaaggagaaggacaaggagaag
cgcttcagcctcttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
