Puntigrus tetrazona (Sumatra barb): 122353838
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Entry
122353838 CDS
T08985
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122353838
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptet04812
]
122353838
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122353838
Cytoskeleton proteins [BR:
ptet04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
122353838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
Cnd1
TOR1L1_N
Sec7-like_HUS
Dopey_N
ParcG
MMS19_C
DUF5740
TAN
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
122353838
NCBI-ProteinID:
XP_043107648
LinkDB
All DBs
Position
11:11893348..11955071
Genome browser
AA seq
1567 aa
AA seq
DB search
MEPSMEYIVAQVTQKEVGRRFQVGPEIIDYILDRQKSRDLEHDQSMLDRMVDALATSWVN
ASNFKVALLGMDIVSALVTRLQERFKTQIGTVLPSLMDRLGDSKDQVRDQAQSLLLKVMD
QAADPQYVWDRMLSGFRHKNSRTREAVCFCLISTLNVYGAPGLTLSKIVPHICHLLGDPA
AQVRDGAMACLVEIYRHVGERVRLDLGKKGLPQSRLNVIFSRFDEVQRSGNMILSSDKNM
DDDESVDGGRSSSSSKGASSVRRTGSMRRPSSASSSKSSGKESSGAGAVDEEDFLRAFED
VPAVQIYSSRELEDSMNKIRDILSDDKHDWELRVAALKKVRSLLLAGASDYDGFPQQLRQ
LEGPFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAENIMPALLNLVPNSAKVMATS
GVAAIRLIIRHTHYHRLIPIMTSNCTSKSVAVRRRCYEFLDLLLQEWQTSSLERHVAVLM
ETVKKGVHDADSEARSVARKCYWGFHAHFSKEAELLFQALELTYQKALQSHLKSSDSVLS
LPQSDRSSSSSQESLNRPLSAKTPVGSGSGKTKVVSGRASSSSGSLQRSRSDVDVNAAVS
AKSRMPAVASSAPFSSAAALPPGSYASLDAAGNVEGRVRTRRQSSETTAGGGASVTDSRG
RSRAKAVSQSQRSRSANPVGGKVHAGSRSSSPGKLLARSSVRIPRSAGSSGAPSDKRSKI
PRSQGCSRETSPSRARDVRASRIPRPSMSQGCSRDTSRESSRDTSPARGFSPLASHRHSR
STSALTAGDVLQTDRFGLIHQAMRILNTGTEVEAAVADALLLGDSRNKRRPMRRRYESPG
VYSDDDANSDASSACSERSFSSRNGAGPHYLRQTEDVAEILNHCASSNWSERKEGLLGLQ
NLLKSPRVLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFITLHRDDLQDWLFILL
TQLLKKLGADLLGSVQAKVQRALDVTRDSFPYDQQFNILMRFIVDQTQTPNLKVKVAILK
YIESLSRQMDPSDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQMVLIALFELNTPEFTM
LLGALPKTFQDGATKLLHNHLKNSSNAAAVSQASPSGAGRTPPRPPGTRSSPLTSPTNGS
HGGLSPSRLWGRSSKPSSNLPPPYPGPATPPLRAYRRAYSPSMLEYDTENMNSEEIFSSL
RGVTEAIQSFSFRSQEDILDPIKRDGKRDDTTGLASSSADPRLTAAVIEGGRPALDNKTS
LLNTPSPRTFSGPWAREYNPYNYSESISAYEKGAVFDDAEHIRDARPQDCGENKILHPKG
FSAGPGQHLEMVGDLLKELSNHSERVDERRAALLELLKVTRDDSLAVWEEHFKTMLLLLL
ETLGDRDHTVRALALRVLKEIMRSQPARFKNYAELTIMKTLEAHKDCHKEVVRAAEETAS
TLAGSIHSEQCIKVLCPIVQTADYPINLAAIKMQTKVIERIPQDSLIQLLPDIIPGLLQG
YDNTESSVRKASVFCLVAIYSVIGEDLKPHLQQLTGSKMKLLNLYIKRAQTTTNSNSSSS
SDVSSHS
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagcatggagtacatagtggcccaggtcacgcagaaggaggtcgggcgacgg
tttcaagtgggcccggaaatcatagactacatcctggacagacagaagtcacgtgacctg
gagcacgatcagagcatgctggacaggatggtggacgctctggcaacctcgtgggtcaac
gccagcaatttcaaggtggcgctgctgggaatggacatagtatctgctttagtgaccaga
ctacaggaacgcttcaaaacacagataggaacagtcctgcccagtttaatggatcgtttg
ggcgattccaaggatcaggttcgagatcaagcgcagtcacttctgttaaaagtcatggac
caagcggccgatcctcagtacgtttgggaccgaatgctgtccggcttcagacataaaaac
agccggaccagagaagctgtttgcttttgccttatttccacccttaacgtgtacggcgct
cccggtttaaccctgagtaagatcgtccctcacatctgtcacctgttaggagacccggcg
gctcaggttcgtgacggagccatggcttgtctggtggagatctacagacacgtcggggag
agagtgaggctggatctggggaagaagggcctgccgcagtcacggttgaatgtgatcttc
agcaggttcgatgaggtccagaggtctgggaacatgatcctgtcctcagataagaacatg
gacgatgatgaatcggtggatggcggtcgttcttcgtcttcttctaaaggagcgtcgtcg
gtgagaaggacagggtccatgcgaagacccagctccgcgtccagctccaagagctcaggt
aaggagagctctggtgctggtgctgttgatgaagaagacttcctccgtgcctttgaagat
gtgcccgctgtacagatttattcgagtcgagagctcgaggactccatgaacaagatccga
gacattctgtccgatgacaaacacgactgggagctgcgcgtggctgctctgaagaaggtg
cgttctcttctgttggccggcgcgagcgactacgacggttttccgcagcagttacgtcag
ctggagggaccgttcaagctctcggctaaagatctgcgctcgcaggtggtgcgcgaggcc
tgcatcacgctcggacacttgtcgtctgtgctgggtaataaattcgatcacggagccgag
aacatcatgccagcgttactgaacctcgtccccaacagcgctaaagttatggccacctcc
ggagtggcggcgatccgtctcattatacggcacacacactatcatcgtctcattcccatc
atgaccagcaactgcacgtcgaaatcagtggccgtcaggcgacgctgttatgagtttctc
gatcttctgcttcaggagtggcagaccagttctctggagaggcacgtcgccgtcctcatg
gaaaccgttaagaaaggagttcacgatgccgactccgaggccagatcggtcgccaggaaa
tgttactggggcttccacgcccacttcagtaaggaggcggagcttctgttccaggctctg
gagctgacctatcagaaggctctgcagtctcacctgaagagctccgacagcgtcctgtct
cttcctcagtccgaccgctcgtcctccagctcacaggagagcctgaatcgaccgctgtct
gctaaaacacccgtcgggagcggctcgggcaaaactaaagtggtgagtggtcgcgcgtcc
tcttcgtccggctctctccagcgctcacgcagcgacgtggacgtcaacgccgcggtcagc
gccaaatcccgaatgccggctgtggcctctagcgcccccttcagctcagccgcggcactg
ccgcccggatcctacgcctctctcgacgctgctggtaatgtggagggtcgcgtgcgaacg
agacgacagagttcagagactacggccgggggcggggcctctgtgacggacagcaggggg
cggagccgagccaaggctgtgtcccaatcacaacgatccagatcggctaatccggtgggg
ggtaaagttcacgcgggcagccgctccagttctcccgggaagctcttggcccgctcttcc
gtgaggatccctcgatcagccggatcgtccggagcgccgtccgacaagcgcagcaagatc
cctcgcagtcagggctgcagccgagagacgagccccagccgcgcgagagacgtgcgggcc
agtcgtatcccgcggcccagcatgagtcagggctgtagtcgtgacacgagtcgggagagc
agcagagacaccagcccggctcgagggttcagtcctctggcatcccacagacactctcgc
tccaccagcgctctgacggccggagacgtcctgcagacagaccgcttcggactcatccat
caggccatgcggatcttgaacacgggcacggaggtggaggcggccgtggcagacgctctg
cttttaggagactccaggaataagcggcggccgatgcggcggcgttacgaatcacccggc
gtgtactcggatgacgacgctaacagcgacgcgtccagcgcctgctcggagcgctccttc
agctctcgaaacggcgccgggccgcattacctgcgtcagacggaggacgtggccgagatc
ctgaaccactgcgccagctccaactggtccgagaggaaagaggggctgctgggactccag
aacctgctgaagagccccagagtgctcagtcgtgtggagctgaagagactgtgtgagatc
ttcacccgaatgtttgcagatcctcacagcaagagagtgttcagcatgttcctggagacg
ctggtggacttcatcacgctgcaccgagacgatcttcaggactggctcttcatcctgctc
acgcagctgctcaagaaactgggggccgacctcctgggctccgttcaggccaaagtccag
cgggccctcgacgtcaccagggactcttttccgtacgaccagcagttcaacatcctgatg
cggtttatcgtggatcagacccagaccccgaacctcaaggtgaaggtggccatcctgaag
tacatcgagtccttgtcgaggcagatggacccgtcggacttcgtgaactcgagcgagacg
cggttagccgtatcccggatcatcacgtggaccacggagcccaagagctcggacgtcagg
aaggctgctcagatggttctgatcgccctgtttgagctgaacaccccagagttcaccatg
ctgttaggagccctgcccaaaaccttccaggacggagccactaaactcctgcacaaccat
ctgaagaacagcagtaacgcagcagcagtgtcccaggcgtctcccagcggcgcgggacgg
acccctccgcggcccccagggacccgcagcagcccgctgacctcacccaccaacggctct
cacgggggactgtcacccagtcgtttgtggggccggagctcaaagccttcttctaacctc
cctcctccctaccccggccctgccaccccccctctccgggcctatcggagggcgtattcg
cccagcatgctggagtacgacacagagaacatgaactcagaggagatcttcagctcgctg
agaggagttaccgaagccatccagagcttcagtttccgcagtcaggaagacatactcgat
cccatcaagcgtgacggcaagagggacgatacaaccggtctggcgtcgtccagtgcagat
cctcgtctgaccgctgctgtgatcgaaggaggccggccggcgctggacaacaagacgtcg
ctgttaaacacgccgtcccctcgaacgttcagcggcccgtgggctcgagaatacaacccg
tacaactacagcgagtccatcagcgcctacgagaaaggagccgtgttcgacgacgcggag
cacatccgagacgctcgtcctcaggactgcggagaaaacaagatcctgcatcccaaaggt
ttttctgcaggacccgggcagcacctggagatggtcggtgacctgctgaaggagctgtcc
aatcacagcgagcgcgtggacgagaggcgggccgctctcctggagctgttaaaggtcacg
cgtgacgacagcctggccgtctgggaggagcatttcaaaaccatgctgctgctgctgctg
gagacgctcggagacagagaccacaccgtccgagcgctggccctgagagtcctcaaggag
atcatgcgcagtcagccggcgcgcttcaagaactacgcagagctcaccatcatgaaaacc
ctggaggcccataaagactgtcacaaggaggtggtgcgggcagcagaggagacggcctcc
acgctcgccgggtccatccactcagagcagtgcatcaaggtgctgtgtcccatcgtccag
acggcagactatcccatcaacctcgccgccattaagatgcagaccaaagtaatcgagcgc
attccccaggattccctgattcagctcctgcctgacattatccccggactcttacagggt
tatgataacacagagagcagcgtacgcaaggccagtgtgttttgtttggtggccatttac
tcggtgatcggtgaagatctgaagcctcatctccagcagctgaccggcagcaagatgaag
ctgctgaacctgtacatcaagcgagctcaaaccaccaccaacagcaacagcagcagctct
tcggacgtctcgtctcacagctga
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