Puntigrus tetrazona (Sumatra barb): 122353905
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Entry
122353905 CDS
T08985
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122353905 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122353905 (nfasca)
Cell adhesion molecules [BR:
ptet04515
]
Immunoglobulin superfamily
L1 family
122353905 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_5
Ig_4
V-set_CD47
Ig_6
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
Izumo-Ig
BiPBP_C
C1-set
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
122353905
NCBI-ProteinID:
XP_043107729
LinkDB
All DBs
Position
11:20304203..20375410
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AA seq
1387 aa
AA seq
DB search
MWTQERWAALAVLSIILLLSKVVAPIEVPLDPKIQQELKQPPTIVKQSLKDYIVDPRDNI
IIECEAKGTPVPTFQWRRNGKFFNVGKDPRVTMRSRSGTLEIRSSGKPEDYEGEYQCFAS
NDFGTAISNKILLRVSKSPLWPKEVLEPVVVREGESLVLPCNPPPGLPPPETFWMDSSIM
PIMQDKRVSMGLNGDLFFSNVLARDANTDYSCNARFEFTHTIQQKNPYTLKVQTKEPYND
TFLNSTDTYGARNVPETQPTFLSPRGLSSSKIVLRGEQLLLECIAAGVPSPNINWIKKGA
DLPSKKVKIENFGKTLRLFNVSEEDSGDYVCMASNKIGSIRHSVEVQVKAAPYWLDKPTN
LVLAPDENGRLVCRARGNPKPTIQWLVNGEPIESSLANPNRQVLGDTILFHSVQIGSSSV
YQCNASNEHGYLLANAFVNILDMAPRMLGPKNQLIKVIENNRTFLDCPFFGSPFPLLRWF
KNGLGSGLDGGQYKLYNNGTLEIKQARPEDQGTYTCVASNILGKMENQVRLEVKEPTRVV
RAPEHVTQSKGTTVRFDCRVKHDSSLPVTVTWLKDDKPLSFSWSGRIRKDDETLTIYNVN
PEDAGTYTCTAKTEIDENSASARLTVTEDDISSASNRSASAGRPDAPQDLELSDPSARSV
RLTWVPGNENNSPVTHFLVQFEEDRWEPGKWQNLSIFDGNLNSVNLQLSPFVNYQFRVIA
INAVGQSQPSLPSARYQTSGASPDVVPSGLKGWGSKKNNMEIMWQALKNTERNGPNLRYM
ISWRRKDTEEEWNNITTTRTKHIIHNTDTYVPYEIKIKAINDFGHSPESNIVIGYSGEDK
PSAAPSELRVSKINSTKVNVHWVPVDPSTVNGEFKEYKLYYWREASLIKGLKVNKTKLHK
GFFTMAEQPSGILTELSPYSKYKMYMVVANREYEGPQSNTVEFYTKEGEPGAPKYFRILR
HTDVVHLKWDKPLEPNGVLIGYTLQYHTVNGTLTGERKAQSFPPNVTEYTMNLPNRFTRF
KFYLAARTQVGAGEVYAVESPHFSNEGTPDTDSTVVAVNFTDVLMFETPPPPPPLSTDPI
PTILTPEPATPAPTTAAPPKPTTTTTTTTTTTTTTTTTTTTSTTASTTVLPVRPLSPKTV
DWKMLAPNVKIWNLTVDANNDYANVSWKHNFSVDSSEFVLEFTLDSNGSMKSIQVNHQPP
IKLAGLVAGAKYRLRVYSHEHNSISSDYVTFETGRAYKEQEDIATQGWFIGLMCAVALLV
LILLIVCFIKRSRGGKYPVREKKDLPLDAVDHKDQDGSFDYQNENRSLERESSDEDNKPL
QGSQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPV
NAIYSLA
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgcaggagcggtgggcggcactagcagtgttgtcaataatcttgctgctttca
aaggtggtggctccaatcgaagtaccactggacccgaagatccagcaagagctcaaacag
ccccccaccattgtgaagcagtcgctaaaggactacattgtggaccccagagataacatc
atcattgaatgcgaggccaaggggactccagtgccaacgtttcagtggcggaggaatggg
aagttttttaacgtggggaaggacccacgggtcaccatgcggagtcgttctggaacactg
gagatcagaagcagcgggaaaccggaagattatgaaggagagtaccagtgcttcgcctcc
aatgactttggcacagcgatttccaacaaaatcctactacgagtgtcaaagtctccgctg
tggccgaaggaggttctggagccggtggttgtgcgtgagggggaatcactcgtcctgccc
tgcaaccctcctcctggtctcccccctcctgaaaccttctggatggacagctccattatg
cccataatgcaggacaagagggtgtcaatgggcttgaacggtgacttgttcttctccaat
gttctggctagagatgccaacactgactacagctgcaacgctcgcttcgagttcacacac
actattcaacagaagaacccatatacccttaaagtgcaaacaaaggaaccatataatgac
acatttctcaactccactgatacgtatggtgcacgtaatgtaccagaaacccagcctacc
tttctgtctccaaggggcttgtccagctccaagatagtgcttcgaggggaacagcttctt
ctggagtgtatagcagctggagtcccttctcctaacattaattggattaaaaaaggagca
gacctcccatccaaaaaagtcaagatcgagaactttggtaaaactctacgcctcttcaat
gtgtccgaggaagactccggtgactatgtctgcatggccagcaacaaaattggcagcatt
cgccattcggttgaagtccaagtcaaagctgctccgtattggctagataagcccaccaat
ctggtgcttgcccccgatgagaatggtcgattagtgtgtcgagccagaggcaaccccaaa
cccactatccagtggctggtgaatggggaacctattgaaagttcactagcgaacccaaac
cggcaagttcttggcgacaccatcctgttccattctgtccagattggcagcagctcagtt
taccaatgcaacgcatccaatgaacatggttatttactggccaatgcgttcgtcaacatc
cttgacatggcaccacgcatgctaggtccaaagaaccagctgatcaaagtcattgaaaac
aacaggaccttccttgactgtcctttctttggctcaccgtttcctttactgcgctggttt
aagaatggtctaggcagtggtctggatggtggtcagtacaagttgtacaacaatggtact
ttggagattaaacaagcccgaccagaagaccaaggcacctacacttgtgttgccagtaac
attctgggcaagatggagaatcaagtgcgcctggaggttaaagagcccacaagagtggtg
cgggcacctgagcatgtcacacaatccaaaggaaccacagttcgctttgattgtcgagtt
aaacatgattcttcccttcctgttacggtcacatggctaaaagatgacaagcctctaagc
tttagctggagtggccggataagaaaggatgatgagaccttgactatttacaatgtcaat
ccagaagatgcaggaacttacacatgcactgccaaaactgagatagatgagaactctgcc
tcagctcgccttacagttacagaggatgacatctcgtctgcctcaaatcgtagtgcctct
gcaggtcgaccagacgcccctcaggatcttgagctctctgacccttcagcacgtagtgtt
agactcacctgggtgcctggaaatgaaaacaacagtcctgttacgcatttccttgtccag
tttgaagaggacaggtgggagccagggaagtggcagaacctgtctatatttgatggcaac
ctaaactcagttaacctgcaactgtcaccctttgtcaactaccagttcagagtgattgca
atcaatgctgtgggccagagtcaacccagcctcccctctgcacgctatcagaccagcgga
gcctctcctgatgttgtgccgagtggtcttaaaggctggggaagcaagaagaacaacatg
gagatcatgtggcaggcacttaagaatacagaaagaaatgggccaaacctgcgatacatg
atctcgtggagaaggaaggacactgaggaagagtggaataacataactacaaccagaaca
aagcacattattcataatacagacacctatgtcccgtacgagatcaaaataaaggccatc
aatgactttggacacagtcctgagtcaaacatagtcattggttattctggggaagacaaa
ccatctgctgcaccatcagaactcagggtttcgaagatcaacagcacaaaagtaaatgta
cactgggtgcctgtggaccccagcactgtgaatggagagtttaaagagtacaagttgtac
tactggcgggaggccagcctcattaagggcttgaaagtgaacaagacaaagttgcataaa
ggcttcttcaccatggcagaacagccctctggcatcctgacagagctttctccgtatagc
aaatataagatgtacatggttgtggctaacagagaatatgagggaccacaaagcaacact
gtggagttctacaccaaggagggagaacccggggctccaaagtactttaggattctgagg
cacacagacgtcgttcacttgaaatgggacaagcccctagagccaaacggtgtcctgatt
ggatacacacttcaataccacacagtgaacgggacattaacaggagagaggaaggcccag
agttttccacccaacgtgacagagtacaccatgaatctgcctaaccgcttcacacggttc
aagttctaccttgcagctcgaacacaggtcggagcaggagaagtgtacgccgtggagtcg
ccacatttctcaaacgaaggcaccccagatactgactctacagttgtagccgttaacttt
acggatgtcttgatgttcgaaactcctcctcctccccctcccctctccactgacccaatc
ccaacaatacttaccccagaaccagccacaccagcccctacaactgctgctccgcccaaa
cctactactactaccactactactactacaactaccacaactactacaactaccaccacc
acttctacaacagcttccaccacggttcttcctgttcggcccttgtctcctaaaacagtg
gattggaaaatgctggccccgaatgtaaagatctggaatctgaccgtggatgctaacaat
gactatgctaacgtcagctggaagcacaacttctccgttgacagcagcgagtttgtgcta
gagttcacactggacagtaatgggtcgatgaaaagcatacaagtaaaccaccagcctccc
attaagctggctgggctggtggccggggccaagtatcggttgcgggtgtattcccatgag
cacaactccatcagcagcgactatgtcacgttcgagacaggcagagcctacaaggagcag
gaagacattgctactcagggctggttcattgggctgatgtgtgccgttgctctattggtt
ctcatcctgctcattgtttgtttcatcaagaggagtcgtggggggaaatatccagtgaga
gaaaagaaagacctgcccttagatgctgttgaccataaagaccaagacggttcatttgac
tatcagaacgagaacaggtctcttgaaagggaaagtagcgacgaagacaacaagccattg
cagggcagccaaacatccctagacgggaacgtgaaagagagcgacgacagtctggtggat
tacggtgaaggaggagacggccagttcaacgaggacggctctttcataggccagtacaca
gttaagaaggacaaagaggagacggaaggaaacgagagctcagaagccacgtcgcccgtc
aatgccatctactctctggcatag
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