Puntigrus tetrazona (Sumatra barb): 122353947
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Entry
122353947 CDS
T08985
Symbol
trpc4apa
Name
(RefSeq) transient receptor potential cation channel, subfamily C, member 4 associated protein a
KO
K11796
Trpc4-associated protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptet01009
]
122353947 (trpc4apa)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122353947 (trpc4apa)
Protein phosphatases and associated proteins [BR:
ptet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122353947 (trpc4apa)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
122353947 (trpc4apa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3689
Motif
Other DBs
NCBI-GeneID:
122353947
NCBI-ProteinID:
XP_043107794
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All DBs
Position
11:20905412..20915356
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AA seq
774 aa
AA seq
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MATLLGPESPWMGGKKRTRNRNILCRIQQSQIAGRGFSRGTQLPETLLQERDKRAKWHGI
PVLVQELYESSHLNSDFTRTHTVLKELSSLLSMEAMSFVTEDRKTAQESTFPNTYTFDLF
GGVDLLVELLMRPTLTTLQKPKMNDDLVKDCLSVLYNCCICTEGVTKSLASRDDFVLFLF
TLMTNKKTFLQTATLIEDILGVKKEMIQLEWIPNLSGLVQSFDQQQLANFCRILSVTISE
PDVGNDDKHTLLAKNAQQKRNTSPSRAEVNQVTLLNIPGFIERLCKLATRKVSEATGTSN
FLQELEEWYTWLDNTLVLDALMQIATDEAEHSSTESSDESTLATIPMRHRLPQSMKIVHE
IMYKVEVLYVLCVLLMGRQRNQVHKMLAEFRLIPGLNNLFDKLIWRKYTTSNHVVHGQNE
NCDCSPEISFKIQFLRLLQSFSDHHENKYLLLNAQELNELSAISLKANIPEVEALVNTDR
SLVCDGKKGLLTRLLTVMKREPPDSSFRFWQARAVESFLRGATSYADQMFLLKRGLLEHI
LFCIIDSGCKSRDVLQSYFDLLGELMKFNIDAFKRFNKYVNTEEKFQVFLTQINSSLVDS
NMLVRCIVLSLDRFESQTEDVKVVEVLSECCLLSYMARVENRLSFLFRLVNIINVQTLTQ
ENVSCLNTSLVILMLARRRGKLRFYLNALREKEYAEKYPGCLLNNFYNLLRFWQHHYLNK
DKDSTCLENSSCIPFSFWKETVSVLLGEDRTSPCAIISYIDEPYMELDRDLLED
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctactggggcccgagtccccttggatgggaggcaagaaacggactcgaaac
agaaatattctctgcagaatacagcagagtcagatcgcgggccggggcttcagcagaggg
actcagctcccagaaactcttcttcaggagagagataagagggctaaatggcacgggatt
ccagtcttggtccaagagctgtacgagagcagccacctgaacagtgacttcacccgcaca
cacactgtcctgaaggaactgtcatctctgctgtctatggaggccatgtcctttgtgaca
gaggacagaaagacggcacaggagtctacctttcccaacacatacacttttgacctgttt
ggaggtgtagatctgctggtggagctgctgatgagacccactttgactacgctacaaaaa
cccaagatgaacgatgacttggtgaaggactgcctcagtgtgctgtacaattgctgcata
tgtacggaaggagttacaaaaagcttggcgtcgagggatgactttgtgttatttctcttc
acgctgatgacaaataagaagacctttttgcaaaccgctacgttaattgaggatattctt
ggagtcaaaaaggaaatgattcagctggagtggatcccaaacctgtcaggactggttcag
agctttgatcagcagcagctcgccaacttttgtcgtatcctctctgtgaccatctctgag
ccagatgtggggaacgatgacaaacacacactcctggctaaaaatgcacagcagaaacgc
aataccagcccctcacgtgccgaggtcaatcaggtcacactcctgaacatccctggcttt
attgagcgtctctgtaagttggccacacggaaggtgtctgaggcgacgggaacgtcaaac
tttctgcaggaactggaggaatggtacacttggctcgacaacactctagtgctggacgct
ctcatgcagatagccacagatgaagccgagcacagtagcacagaatcgtctgatgagagc
acactggccaccatcccaatgaggcaccgtttgccgcagtctatgaagatcgttcatgag
atcatgtataaggtggaagtgctttacgttctatgtgtacttctcatgggccgacagcgg
aaccaggtacataaaatgttagcggagtttcgtttgattcctggactcaataaccttttt
gacaagctcatctggaggaaatacaccacctctaatcacgtggttcatggacagaatgaa
aactgtgattgcagcccggaaatctcatttaaaatccagttcttgaggcttctgcagagc
tttagtgaccaccatgagaataagtacctacttttaaacgctcaggagctgaatgagttg
agtgccatctccctaaaggcaaacatccctgaggtggaggctctagtaaacaccgacagg
agtttagtgtgtgatggtaaaaaagggcttcttacacggctcctcactgtaatgaaaaga
gaaccgccagactcttcctttaggttctggcaggccagagctgttgagagcttcctcaga
ggggccacctcatatgcagaccagatgtttctgctgaagagaggcttgctggagcacatc
ctcttctgcatcatcgatagcggctgcaagtccagagatgtcctgcaaagctactttgat
ttgctcggggagcttatgaagttcaacatcgatgccttcaagagattcaacaaatatgtc
aacaccgaagaaaagttccaggtgttcctcactcagatcaacagctctctggtggactcc
aacatgcttgtgcgatgtatcgtcctctctctagatcgctttgagagccagacagaagat
gtgaaagtggttgaagtgctctctgagtgctgtctgctgtcctacatggctcgagtggag
aacagactgtccttcctttttaggctggttaacatcatcaacgtgcaaaccctcacacag
gagaatgtgagttgtcttaacaccagcctggtgattctgatgttggcccgaaggagaggc
aagctccggttttacctgaacgccctgcgggagaaggaatacgcagagaaatatcccggc
tgccttctcaacaacttctacaacttgctgcgcttttggcagcaccactacctcaacaag
gacaaggacagcacctgcctggagaatagctcctgtattcccttcagtttctggaaggag
actgtttcagtactgcttggtgaggacaggacttctccctgtgccattatcagctacata
gatgagccttacatggagctagaccgggaccttctagaggactga
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