Puntigrus tetrazona (Sumatra barb): 122354017
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Entry
122354017 CDS
T08985
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a isoform X1
KO
K14966
host cell factor 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03083
Polycomb repressive complex
ptet04980
Cobalamin transport and metabolism
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122354017 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
122354017 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122354017 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptet01009
]
122354017 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122354017 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
ptet03029
]
122354017 (hcfc1a)
Protein phosphatases and associated proteins [BR:
ptet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122354017 (hcfc1a)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
122354017 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
122354017 (hcfc1a)
MLL-HCF complex
122354017 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
122354017 (hcfc1a)
Mitochondrial biogenesis [BR:
ptet03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
122354017 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
122354017
NCBI-ProteinID:
XP_043107907
LinkDB
All DBs
Position
11:complement(21039533..21054381)
Genome browser
AA seq
1845 aa
AA seq
DB search
MTSPGSVLPGTTGAPLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKPKAPKNGAPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
PGSSVVGWDIPVTYGVLPPPRESHTAVVYTEKATKKSRLVIYGGMSGCRLGDLWTLDIDT
LTWNKPAISGAAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDALTWETVLMDTLEDNIPRARAGHCSVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPNPPSRVQLVRANTNSLEVSWGAVSTADMYLLQLQKYDIPSATAATSPALNAAPSL
PGNSPKSPAPAAAAPSAQSLPQSGITFVSQAASPTTSVLPSTPASPVAASTARGPAILKV
AAPQSGTGTSIVTVRQATQAGKSPVTMTSLPAGVRMVVPTQTTQGTPIGGSPQMSGMAAL
AAAAAATQKIPPSPGATVLNMPAGATIVKTVAVTPGSTTLPTTVKVASPVMVSNPATRML
KTAAAQVATPTASSPTTAARPIITVHKSGTVTVAQQAQVMTTVVGGVTKTITLVKSPLSM
GGNLISNLGKVVSVVQTKPVQTAAVTGQASSNPVTQIIQTKGPLPPGTILKLVTSADGKP
TTIITTSQAGGTGNKPTILGISGMSPSATNKPGTTTIIKTIPMSALQQGAAGVTSSTGVK
SPITIITTKMMTAGTPGKIITAVPKIGTAAGQQGLTQVVLKGAPGQPGTILRTVPMGGVR
LVSPVPGVKPTVTTLVVKGTTGVTTLGTVTGTVSSSLAGGSLASANATLGTPITTLGTIA
TLSSQVINATAVSAAQSNLTSVTSTMQPTQVTLITTPSGVEAQPGQDLPVSILASPTSEQ
PTSTESGAGDASGSVTLVCSNPPCETHETGTTNTATTATANMGAGPAGTVQRVCSNPPCE
THETGTTNTATTASANMGTVQRVCSNPPCETHETGTTNTATTASSNMGTAPAVTVQLVCS
NPPCETHETGTTNTATTASSNMGGNQTGVAQRVCSNPPCETHETGELPSSNMGGNQTGTV
QRVCSNPPCETHETGTTNTATTASSNMGGNQTGTAQRVCSNPPCETHETGTTNTATTASS
NMGGNQTGTVQRVCSNPPCETHETGTTNTATTATCSMETDEGTAQQSGETSESTTSTEGL
PSTAAPQSRAITIVTQATPLPGPAVPSISSITESSSEAGAEPVVMDSSEAESLQAGGQAE
AEAVAMQAEFQTEAGAEAMPSDFQAEAAALPSDFQGEAVAVAMQAESQAEEGAVPMEHDT
SSMAVGESAQEQLQTAEMEGVEAASASQAEALALPPELMSDGQPTTLMVTGLTPEELAVT
AAAEAAAQAAATEEAQALAIQAVLQAAQQAVMSSGDAGGDDQQTHTIPIVLTQQELAALV
QQQQQLQAAQQAAAQAALPTEGLAPADSLNDPSSESNGHSEIAAAATSTVVGLLPSTSAE
SMCQVSRFYALAPSSTLAPVVVASPAKMQAAAALTEVANGIEAAKQNPPTVTIKPLVKKE
NQWFDVGIVKVTNMVVTHFYMPADDAAYVEDDSGTIPDYSQMKRVDLQPGTAYKFRVAGI
NTCGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKITEYSVYLAI
QSSQTTEAKPSAPAQLAFMRVYCGPNPSCLVQSTSLSNAHIDYTTKPAIIFRIAARNEKG
YGPATQVRWLQESNKDGLSAKPAPKRAVSSPDTKGIGQKKARMDQ
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccccggttccgttctgcctggaaccaccggagccccgctgcagccgcgatgg
aagcgggttctgggatggtccgggccggttcctcgaccgagacacgggcacagagccgtg
gccatcaaggagttgatggtcgttttcggcggaggaaacgaagggatcgttgacgagttg
cacgtttataatactgcaacaaaccagtggttcataccagctgttcgtggagacatccct
ccaggctgtgcagcttatggttttgtatgtgatggcacacgtctattagtgttcggtgga
atggtggaatatggaaagtacagcaacgacctttatgagctacaggcaagcagatgggaa
tggaaaaaattgaaaccgaaagcccctaaaaatggagcaccaccatgtcctcgcctgggc
cacagtttttctcttgtgggcaacaagtgctatctttttggggggcttgccaatgacagt
gaagaccccaagaacaacattcccagatatttgaatgacctttataccctcgagctgcgt
ccgggctccagcgttgtgggctgggatataccggtcacatacggagtgctgcctcctccg
agagagagccacactgctgtagtttatactgaaaaagctactaagaagtcccgtcttgtt
atatatggaggaatgagtggatgccgtttgggagatctttggacattggatattgataca
ctgacctggaacaagcctgcaataagcggcgcggctcccctcccccgtagccttcactca
gccaccactattacaaacaaaatgtatgtttttggtggctgggttcctttagtgatggat
gatgtgaaggtggccacacatgagaaggaatggaagtgtacaaacacacttgcctgcctg
aatttggacgctttgacatgggagactgttttgatggacactttggaggacaacatacca
cgtgcacgggcaggacattgctctgttgctattaacaacagactttatgtttggagtgga
cgtgatgggtaccgcaaggcttggaacaatcaggtgtgctgcaaagacctgtggtacctg
gagacagagcgacctaatcctccttcacgggtacagcttgtccgggccaacacaaattct
ttggaggttagctggggagcggtgtctacagcagacatgtacctgcttcagcttcagaaa
tatgatatcccatcagccactgctgccacatcaccagccctcaacgcagctccctccctc
cctggaaattcgcctaagagtccagcgcctgctgcagctgctccatctgctcagagtctg
ccgcaaagtggcatcaccttcgtgtcccaggctgcttctcccacaacctcagtcctgccc
agcacacctgcaagtcctgtggctgcctcaacagcacgtggaccagctatactgaaagtt
gcagcccctcagtcaggcactgggacgtcaattgtcactgtgcggcaggccacccaggct
ggaaagtccccagtcactatgacatcacttcctgcaggtgttcgcatggtagtgccgaca
cagactactcaaggaacgcccattggtggcagccctcagatgagtggaatggcagctttg
gccgcagctgctgcagccacacagaaaatccctccttcccctggagccactgttctcaat
atgccggctggggccacaattgtcaaaacggtggctgtgacacctgggtccaccactctc
cccaccacagttaaagtggcatcacctgtcatggtaagcaaccctgccactcgtatgcta
aagactgcggctgcacaggtggccactccaacagcgtccagtcccactacagcagctcgg
ccaatcatcactgtgcacaagtctggcacagttaccgtagcccagcaggctcaggttatg
accacggtggtgggtggagtcaccaagaccatcactcttgtcaagagcccactttccatg
ggtggaaacttgatctccaacttgggcaaggttgtgtcagtggtacagaccaaaccagtg
cagacagctgctgtgacgggacaggcctcctccaacccagtgactcagattatacagact
aagggtcccctcccacctggcactattctgaagctggtaacatctgcggatggaaaacca
accaccataattaccaccagtcaagcaggtggcacaggaaacaagcccactatcttgggc
atcagtggcatgtctccctctgccaccaacaaaccaggcaccaccactattattaaaaca
atccccatgtctgctctacagcagggagctgcaggtgtgactagcagtacaggggttaag
agtcctattaccatcatcaccacaaagatgatgacagctggaactcctggcaaaatcatt
acagctgtgcctaagattggtacagcagctggccagcaaggcctaacacaggttgttctg
aagggagctcctggtcagcctggaaccatccttcgcactgtgcctatgggaggagtgcgt
ctcgtgtctccagtacctggggtcaagccaactgtgaccacactagttgtgaagggaaca
actggtgtaacaactcttggcacagtcacaggaacagtttctagcagcctagctggagga
agcttagccagtgccaacgccaccctgggaacccctatcaccactttgggcacgattgcc
accctctccagccaggtcattaatgctaccgctgtgtcagctgctcagagcaacctgacc
tccgtcacctccaccatgcagcccacccaggtgactctcataacaacacctagtggtgtg
gaggctcagcctggccaagatctgcccgtttccatcctggcctctcccacctctgagcag
cccacctctactgagtctggtgcaggcgacgcttctggcagtgttactttagtgtgctcc
aatccaccctgtgagactcatgagacgggcaccaccaacacagccaccacagcgacggca
aatatgggcgctggaccagctggcacagtacagagagtgtgctccaaccctccctgcgaa
acgcatgaaacaggtacaacaaacactgccaccaccgcatctgcaaacatgggcactgta
cagagggtctgctccaacccaccatgtgagacccatgaaacaggcaccaccaatacagca
accacagcatcttcaaatatgggcacagctcctgctgtaactgtccagttggtctgctcc
aacccaccttgtgagacccacgagacgggcactaccaacacagcaaccacggcatcatct
aacatgggtggaaatcaaactggggtggcgcagagggtctgttcaaacccaccttgtgag
acccacgagacgggtgagctaccatcctctaatatgggcggaaatcagacaggaaccgtg
cagagggtctgttcaaacccaccttgtgagacccacgagacgggcaccaccaatacggct
actacagcatcctctaatatgggcggaaatcaaacaggaacggcgcagagggtctgttca
aacccaccttgtgagacccacgagacgggcaccaccaatacagctactaccgcatcctct
aatatgggcggaaatcagacagggaccgtgcagagggtctgttcaaacccaccttgtgag
acccacgagacaggcacgacaaacactgcaaccactgcaacctgcagtatggagacagat
gagggaacagcccaacagagtggtgagacatcagaatctaccaccagtacagaaggcctg
ccgtccactgcagcacctcagagcagagccattactatagtcacacaggcaacacctcta
ccaggacctgctgttccgtccatctcttcgatcacggagtcatcctcggaggccggagct
gagccggttgttatggatagctcggaagcagagtctttgcaggcaggaggccaggctgaa
gcagaggcagtcgctatgcaggcagagttccagacagaggcgggggcagaagcaatgcca
agtgacttccaggcggaggcagccgccttgccgagtgatttccagggagaagctgtagcg
gtagccatgcaggcggagagccaggcggaggaaggggcagtgcccatggaacatgacact
tctagcatggcagtgggagaatctgctcaggagcagctacagacagctgagatggagggt
gtagaggcagcatcagcatcacaggctgaggcgctggccttgccaccagagctgatgtca
gacgggcaacccacaacgcttatggtgacgggtctgaccccagaggagctggctgtcacg
gcagccgcagaggcagcggcccaggctgcagcgacagaagaggcccaagccctcgccatt
caggctgtactacaagcagcacagcaggctgttatgagctctggtgatgccggaggagac
gaccagcagacccacaccatacccattgttctgacccagcaggaactagcggctttggtt
cagcagcaacagcagctccaggcagctcagcaagctgctgctcaggctgcactgcccact
gaaggcttggctccagctgacagcctgaatgatccctcatcagaaagcaacggacacagc
gagattgctgctgctgccacaagtacagtagtgggactgctgcctagcacctcggcagag
agtatgtgtcaagtttcacgcttctatgccttggctccatccagcacattagcccctgta
gtagttgccagtccagctaagatgcaggcagctgctgctttgactgaagtggctaatggt
attgaggctgcgaaacaaaaccctcccactgttaccatcaaacctctagtcaaaaaggaa
aaccagtggtttgatgttggcattgtcaaagtgaccaatatggttgtaacgcatttctac
atgcctgcagatgacgccgcttatgttgaggatgattctggcacaattcctgactatagc
cagatgaagagggtggaccttcagcccgggacagcatacaagttccgtgtggcgggtata
aacacatgtggccgtggagccttttcggaaatatctgctttcaagacctgtttaccaggc
ttccctggggcaccgtgtgccataaagatcagcaagagtccagacggtgcacaccttaca
tgggagcccccatccgtgacctcaggaaagatcacggagtactctgtgtatctggccatc
cagagcagtcagaccacagaggccaaaccctcggctccggcccagcttgccttcatgcgt
gtttactgtgggccaaatccttcctgtctggtccagtccaccagcctgtccaatgcccac
atagactacaccaccaaacccgccatcatcttccgcatcgctgcacgcaacgagaaaggt
tatggcccggctacacaagtgcgatggctgcaagaatctaacaaagatggcctttctgca
aagcctgcccccaaaagagcagtttcttcaccagatacgaaagggataggtcagaagaaa
gcgagaatggaccagtga
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integrated database retrieval system
