Puntigrus tetrazona (Sumatra barb): 122354018
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Entry
122354018 CDS
T08985
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein Rab-7a isoform X1
KO
K07897
Ras-related protein Rab-7A
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04137
Mitophagy - animal
ptet04140
Autophagy - animal
ptet04144
Endocytosis
ptet04145
Phagosome
ptet04148
Efferocytosis
ptet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122354018 (si:dkey-13a21.4)
04145 Phagosome
122354018 (si:dkey-13a21.4)
04140 Autophagy - animal
122354018 (si:dkey-13a21.4)
04137 Mitophagy - animal
122354018 (si:dkey-13a21.4)
04148 Efferocytosis
122354018 (si:dkey-13a21.4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122354018 (si:dkey-13a21.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122354018 (si:dkey-13a21.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122354018 (si:dkey-13a21.4)
04031 GTP-binding proteins [BR:
ptet04031
]
122354018 (si:dkey-13a21.4)
Membrane trafficking [BR:
ptet04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
122354018 (si:dkey-13a21.4)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122354018 (si:dkey-13a21.4)
Exosomal proteins of other body fluids (saliva and urine)
122354018 (si:dkey-13a21.4)
Exosomal proteins of colorectal cancer cells
122354018 (si:dkey-13a21.4)
Exosomal proteins of bladder cancer cells
122354018 (si:dkey-13a21.4)
GTP-binding proteins [BR:
ptet04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
122354018 (si:dkey-13a21.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
GTP_EFTU
AAA_24
AAA_5
AAA_16
IIGP
NACHT
DAP3
AAA_7
AAA_29
Motif
Other DBs
NCBI-GeneID:
122354018
NCBI-ProteinID:
XP_043107912
LinkDB
All DBs
Position
11:21037311..21040293
Genome browser
AA seq
212 aa
AA seq
DB search
MTDWSTPHLKVILIGNSGVGKSSFMSRFVHHRFTNLYRATIGVDFLTKEITVDKRSVILQ
IWDTAGTERFHSLGTTLYRGAHCCLLVFDVTSPVSFDALDVWKKEFLVQACPSDPSAFPF
IVLANKIDLDYREVSPSKAQQWCSEIGAEYFECSAKEDIGVDTTFHGAARAALQYVSSSC
LYKLTKIIIFIFHQRLARDNIPSLACTNNIKL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacagactggagcacaccacacttgaaagtcattcttatcggaaactctggagtggga
aagtcttcatttatgagccggtttgtccaccatcgctttactaatttgtatcgcgccaca
atcggggtcgatttccttactaaagaaatcactgttgataagagatcagtgattcttcag
atctgggacactgcagggacagagaggtttcactctctgggtaccacactgtatcgtgga
gctcactgctgcctcctagtgtttgatgttacctcgccagtctcctttgatgcactagac
gtctggaagaaagagttcctggtgcaggcatgtccctcggacccctctgcgttccctttt
atagtgctcgccaataaaattgacttggattatcgtgaggtgtccccgagcaaagcccag
cagtggtgcagtgaaatcggagctgaatattttgaatgcagcgccaaggaagacattggc
gtggacacgacttttcacggcgcggcacgagcggccctgcagtatgtgagttcaagctgt
ctgtataaactaaccaaaattattattttcatttttcatcagagactggccagggataac
ataccatccttagcttgtaccaataatattaagttatag
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