Puntigrus tetrazona (Sumatra barb): 122354033
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Entry
122354033 CDS
T08985
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013
Nucleocytoplasmic transport
ptet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122354033 (ddx19b)
03015 mRNA surveillance pathway
122354033 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122354033 (ddx19b)
Enzymes [BR:
ptet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122354033 (ddx19b)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122354033 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122354033
NCBI-ProteinID:
XP_043107940
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All DBs
Position
11:3278801..3285540
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AA seq
480 aa
AA seq
DB search
MASDSWAQAVDEQEAAAESIGSLQINEKEDKLKAEANGAKTEGDDKEKTEEDDKEDKAAQ
SLLNKLIRSNLVNTTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQ
ETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPENKWPQCLCVSPTYELALQTG
KVIEQMGKFYPEVQLVYAIRGNKLERGTKLQEQIVIGTPGTVLDWCQKLKFIDPKKIKVF
VLDEADVMIATQGHQDQSIRIQRMLPKTCQMLLFSATFEDTVWNFAKRIVPDPNIIKLKR
EEETLDTIKQYYVICNSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQ
VALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPD
NETYLHRIGRTGRFGKRGLAINMVDSRFSMNILNRIQEHFNKKIEKLDTDDLDEIEKIAN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagactcgtgggcccaggctgtcgatgaacaagaagccgcagcggaatcgata
ggtagcttgcaaataaacgaaaaagaagacaaactgaaagctgaagcaaacggggcaaag
actgaaggagacgataaagagaagaccgaggaggatgataaagaggacaaggcagcacag
tcactactgaacaagctgatccgcagtaatctagtgaacacgaccaatcaagttgaagtc
ctccagagggatccgagctctccgctctactccgtcaagtcattcgaagagctacgacta
aaaccccagctgctgcaaggagtgtatgccatgggtttcaacaggccctccaaaatccag
gagacggcgttgcccatgatgcttgcagaacctccgcagaatctgatcgctcagtctcag
tcaggcacgggtaaaacggctgccttcgtgctggccatgttgagtcacgtggaccccgaa
aacaagtggcctcagtgtctgtgtgtgtcccccacatacgagcttgccctgcagacgggc
aaggtcatcgaacagatgggcaaattttaccctgaagtccagctagtgtatgccatcaga
ggaaacaaattggagcggggaacgaaattacaggaacagatcgtcattggcactcccggg
actgttttggattggtgccaaaagcttaaattcatcgaccccaagaagatcaaggtgttc
gttctggatgaagctgatgtcatgatcgccacacagggccatcaagaccagagcattcgt
atccagaggatgcttcctaaaacttgccagatgctgctgttctcggccacattcgaagac
accgtgtggaactttgcgaagaggatcgttcccgaccccaacatcattaaactgaagcgc
gaggaagaaactctggacaccatcaagcagtactatgtcatctgcaacagcaaggaggag
aaattccaggctttgtgcaacatctatggagccatcactatcgcccaggccatgatcttc
tgccacaccaggaaaaccgccgggtggctggcaggagagctgtccagagaaggccaccag
gtggcgctgctcagtggagagatgcaggtggagcagagggcagcggtcatcgaacgtttc
cgtgatggcaaggagaaagttctcgttaccaccaacgtctgtgctagaggtattgatgtg
gagcaagtttcagtcgtcatcaactttgatctgccagtggacaaggacggaaaccctgac
aacgagacgtatttgcacagaatcgggcgtactgggcgatttggcaagagggggttggca
atcaacatggtggacagcagatttagcatgaacatcctcaaccgcatccaggagcacttc
aataagaaaatcgagaagctggacacggatgatttggatgaaatcgagaaaatcgccaac
tga
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