Puntigrus tetrazona (Sumatra barb): 122354053
Help
Entry
122354053 CDS
T08985
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122354053 (rbm39a)
Spliceosome [BR:
ptet03041
]
Common components
Common spliceosomal components
General mRNP proteins
122354053 (rbm39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
CDC45
Motif
Other DBs
NCBI-GeneID:
122354053
NCBI-ProteinID:
XP_043107970
LinkDB
All DBs
Position
11:20563438..20569302
Genome browser
AA seq
525 aa
AA seq
DB search
MADDLDIEAMLEAPYKKDDNKSLSTNGHEERSKKKKKSKSRSRSRSREKKRSRSRDRKKS
HDRRRSRSKERKRSRSRERRRSRSRSRERGGRYRAPFSGLKFNGGPRGKTGPPPAVKLSR
RRSRSRSPFKKDKSPIRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDV
RIISDRNSRRSKGIAYIEFVDSTSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNL
QKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFSDAE
CAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQLMAR
LAEGTGLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSFNINVPTNQALNLPSQPIATHC
FQLSNMFNPNSENDPGWEVEIQDDVIEECNKHGGVIHIYVDKKSAEGNVYVKCPSIPAAM
AAVSALHGRWFGGKMITAAYVPLPTYHNLFPESVQATQLLMPSRR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatttggacattgaagcaatgctggaggctccgtataaaaaggatgacaac
aaatccttaagtaccaatggccacgaggagcggagcaagaagaaaaagaagagcaaaagt
cgcagcagaagccgcagccgggaaaagaagagaagcaggagtcgtgatcgcaagaagagt
catgatcgcaggaggagccgcagcaaagagcgtaaacgcagccgcagcagagagaggcgc
cgcagccgttccaggagccgggagcgtggtggtcgctacagagctccattttctggcctg
aaatttaacggtggtcccagggggaagactggcccaccacctgccgtcaaactaagccgt
agaaggtctaggagccgcagccctttcaaaaaagacaaaagccctattagacagcccatt
gataatctcactcccgaagaaagggatgcaaggacagtgttctgcatgcagctggcagcc
agaatccgaccacgagacctggaagaattcttttctgcagtgggaaaagtgcgtgatgtg
agaatcatctcggatagaaactccagaagatccaagggaattgcatatattgagtttgtg
gattccacctctgtacctttggcaattggcctttctggtcaaagacttctcggagtacca
atcattgtgcaggcttcacaggctgagaagaacagagcagctgcattggccaacaattta
cagaagggtagttctggacctatgagactgtatgttggctcattgcatttcaacatcaca
gaagacatgctcagaggcatcttcgagccatttggaaggattgatagtattcagctgatg
atggacagtgaaacgggacgatcaaaaggatatggctttatcacattttccgatgctgaa
tgtgctaagaaggccctggaacagcttaatggcttcgagttggctggcagaccaatgaaa
gtgggacatgtgacggagcgcactgatgcctcaaccgccagctccttcctggacaacgat
gagctggaaaggaccggcattgatctgggaacgactggaagacttcagctgatggccaga
ctggccgaaggtactggtctacagatcccacctgccgctcaacaggcccttcagatgagt
ggctccatggtagccatggctgcagctactgctgcaatgaaccctgggttgagttttaac
atcaatgtgcccacaaaccaagctttgaatctaccatcacaaccaattgcaactcactgt
ttccaactgtctaacatgttcaatccaaactcagaaaatgatcctggttgggaagttgag
attcaggatgatgtaattgaagagtgcaacaaacacggtggagtcatacacatatatgtg
gacaagaaatcagctgaaggtaatgtctacgtgaagtgtcccagcattcctgctgctatg
gctgcagtcagtgcattacatggacgttggtttggaggtaaaatgatcacagcagcttat
gttcctcttcctacataccataaccttttcccagagtcagtgcaggcaacacagcttctt
atgcccagtcgccggtga
DBGET
integrated database retrieval system
