Puntigrus tetrazona (Sumatra barb): 122354060
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Entry
122354060 CDS
T08985
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet00310
Lysine degradation
ptet01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122354060 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122354060 (prdm2b)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122354060 (prdm2b)
Enzymes [BR:
ptet01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
122354060 (prdm2b)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122354060 (prdm2b)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122354060 (prdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HE
zf-C2H2_jaz
Zap1_zf1
zf-C2HC_2
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
122354060
NCBI-ProteinID:
XP_043107988
LinkDB
All DBs
Position
11:complement(21352031..21367724)
Genome browser
AA seq
1749 aa
AA seq
DB search
MAVPQGTYETLDDIPAHVWKGLPNSMKLGPSAVNPSRIGVWASRLIPKGKRFGPFVGERK
KRSQVTSNVYMWEVYFPAWGWMCIDATDPMKGNWLRYVNWARSSQEQNLFPLEINRAIYY
KVLRPIGPDEELLVWYNGEDNPEIAAALEEERTSNLNKKSSPRAKRARRKLSEKARQADL
GGFCEPNKSSAVEPLITEMRDSEEGLNGEERPSSPSELQQENAAQSSSAENENLVQSHIT
EINQREGLDEENAEVDGQLQQPELNQSPQHPSEAESVDGNEKSLLPLHSGSPADESTESP
LCDTECISSLANPELEAEGDFEDDPQGGTYPCQHCERHFSTKQGLERHTHIHTTSNHQTH
TFKCRYCAKPFGSQVGRRRHERRHENGSKTLNRPGSLSGTAFLHSPTAPNDSATSGSASS
PSHSLVMNAQNGPLQQTSDSLKTEPGAESDRPFILDENGESKELHPCKYCNKAFGTHTNM
RRHQRRIHERHLMPKGVRRKGMLLQDGSSQQQQQHEQGQSVLLQEESPSASPPPIYVPSV
ETEDEGEREECMVDISNNISENLSHYIDGKIPSTSTVSNCEVIEVDSSTAALFGLDALIL
SPKQISHAFKIETRTCPTKEVSCVAQTTSKRRTATPPLLPAVKMETETVSSSSSLSSPSS
QSSLLVGNIFSQSTETLAFQKEKSVYLSPKLKQLLQAPDGQKPAIGLIPDSHRLTTPLSV
TSLPAVQGKFKRRTASPPTTSQCSPAQKNDNISSATGVSCSLKVPKIESHCMTHSWSLSS
KDHGDAVSLTGKDWSPSSSGGNSCNQQPLDLSNSFSKKDNSVSKGSGEAVLDLSVNRKSP
VDHEGKTSSATLTPHVKRKKPNTSILEKVLMNEYAGLNSPGDEGCNALGSPDVLSSSESA
TCVGPSSPGSGSERLPCESASPPSLTPMTINPSSPSSSSIASSTPPPPVLPTIPSPPPLS
SSHFRMSDASSPAPFPVLSPKMSPRAGESLEEVSDSCALTEACHDTFNSILNESDQTAEQ
LDPAISPLPQDAKRHCTADSASKSETLLEGSTLDSQFLRNADQAGSSHLEWDTASKTSQS
HSCEGTLPQDLNNKTEGRHKSKSSLSKVQSTLKKEPSSPSFLSELDCSQKSSVVDDNSFV
EDTGKSEGPVDITTNGGNTSPRTTPRSSDEVETLERETFVKSFVCNVCKEPFRSIKDLSG
HIIEHASEWPFKCEFCVQLFGNATALLEHRSSLHGVGRIYICSICSKEFAFLCNLQQHQS
DLHPSQSCTHTAVENGKLRPQNYTDPAYANVEKDTVLDSIAGATSENSTEERNSDTTKVE
EEENGNEDPTEELYTTIKIMASEAGKPKGPDVRLGINQHYPSYKPPPFPYHNRTPDGSVA
SATNFTTHNIPQTFSTAIRCTKCGNSFDNMPELHKHILVCANASDKRRYTPKKNPIPLKQ
VVKQSPNGLLTTTGASAATAAAAGQNAFRRMGQPKRLNFNQDITSKAKLSALNKKKNQLV
QKAISQKNKSVASIKKPTTRVKEEETHKAHACPYCSREFTYPASLSKHIACSCPQRPVAK
KLKKGALMPQDKNRSLRSRATDYEVKQEPGSGPTAKPLGKTRARSSEPVESEAPPANKGK
APQVRTKRLASNADTMAPQTKKGRKSNEPLTSITPALTDDSSTLPPSKMQRSKEVVIKKE
LVIKKESVVKLTPSKKEERFSTRARERKGGPVTRSVQMASASAPLEVKSEDLSNHEPGQS
EESLLKLAR
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcctcaaggaacatatgaaaccttggatgacatcccagcccatgtgtggaag
gggctgccaaacagcatgaagctgggaccatcagctgtcaaccccagtcgcatcggtgtc
tgggcgtctagattaataccgaagggcaaacgtttcggaccattcgtaggagaacgaaag
aagagatctcaagtcacaagcaatgtttacatgtgggaggtatattttccagcctggggg
tggatgtgcattgatgctacagatccaatgaaaggaaactggttgcggtatgtgaactgg
gcacgctcttctcaagagcaaaacctttttccactagagatcaaccgagctatttactac
aaagtgttaaggccaatcggaccggacgaagaacttctcgtgtggtacaatggggaagac
aatcctgagatagctgctgcattagaggaagaaaggactagcaacctgaacaagaagagt
tcacctagagcaaagcgagcaaggaggaagctgtcggaaaaagccagacaggctgatttg
ggtggattctgtgaaccgaataaatcaagtgccgttgaacccttaatcacagagatgcgg
gactcagaggaagggcttaatggtgaggaaaggccctcttcaccttccgagttgcaacag
gagaacgcagcccagtcgtcttctgcagaaaatgaaaaccttgtccagtctcatataaca
gagataaaccagagggagggactggatgaggaaaatgcagaggttgatggacaactgcag
cagccagagttaaatcagagcccacagcacccctctgaggcagaatcagttgatgggaat
gaaaagtctctcctgcctttacattcgggcagccctgcagacgaaagcactgagagtccg
ctttgtgatacagagtgtatatcttctttagcaaatcctgagttggaggcagagggggat
ttcgaagatgacccccaaggaggaacatacccctgtcagcattgcgaacgtcatttctcc
accaaacagggcctggaacgccacactcatattcacactacttcaaaccatcaaactcat
acatttaagtgccggtactgtgccaagccctttggctctcaggtaggcaggcgcagacat
gaacgtagacatgaaaatggaagtaaaactttaaataggcccggatcacttagtggaaca
gccttcctccatagtcctacagcacccaacgattctgctacctctggcagtgcatcctct
ccaagccactcactcgttatgaacgcacagaatggtccacttcagcaaacctctgatagt
ttgaaaacagagcctggtgctgaatctgaccgaccttttatattggatgagaatggggag
tcaaaagagcttcatccttgcaagtactgtaacaaggcttttggcacacacaccaacatg
cgcagacatcagcgaagaatccatgaacggcatctaatgccaaaaggtgttcgtcggaaa
ggtatgctcctgcaggatggctcctcccaacagcagcagcagcatgaacaagggcagtct
gttttgctccaggaagagtcaccaagtgccagtccaccaccgatttatgtgcccagtgtg
gagaccgaggatgagggagagagagaggagtgtatggttgatatttctaacaacatttct
gaaaatctcagccattacattgatgggaagatcccatctacaagcacagtgagcaactgt
gaggtcatcgaggttgattctagcactgcagctttgtttggccttgatgctcttattcta
agtcccaaacaaattagtcatgcatttaaaattgaaacaaggacttgtccaacgaaagaa
gtttcatgtgtagctcagacaacttctaaaagacgaactgctacaccaccactgctgcct
gctgttaaaatggaaacagaaacggtgtcctcctcttcctcgctgtcctccccctcctct
cagtcctctttgttagtaggaaacattttctcccagtcaactgaaacgttagcttttcag
aaggagaaatccgtttatctttctccaaaacttaaacaactactacaggccccagacggt
cagaaaccagccataggtcttatcccagatagccatagattaaccaccccactttcagta
acttcactgcctgctgtccaaggaaagtttaaaagaagaactgcctcccctcccacaact
tcacagtgtagcccagcacaaaaaaatgacaacataagttctgcaactggggtttcatgt
tctctgaaggtgccaaagattgaaagccattgcatgacgcattcctggagtttgtccagc
aaagatcatggggatgcagtaagcctgacaggaaaagactggtctccttcaagtagtggg
gggaattcttgcaatcagcagccacttgacctttcgaattccttcagtaaaaaagacaat
agtgtaagcaaaggctctggagaggctgtgcttgacttaagtgtgaatcgtaaaagtcct
gttgatcatgaaggaaagacaagctcagccacactaacaccacatgtgaaaagaaagaaa
cccaataccagcattttagagaaagtcttaatgaatgagtatgctggcctaaactcacct
ggagacgaaggatgcaatgctctcggaagccctgatgttctttcgtcttctgagagtgcc
acatgtgtcggcccttctagtcccggatcaggatcagagcgccttccttgtgaatcagca
tctcctccctctctgacccctatgactattaatccgtcctctccatcttcatctagcata
gcatcatctacaccccctcctccagtcttacccactatcccatcacctccacctttatca
tcgtcacattttcggatgtcagatgcctcatcacctgccccttttcctgtgttatcacct
aaaatgtcccccagggcaggtgaaagcttagaggaagtgtcggattcatgtgctttaaca
gaagcatgccatgatacattcaattccattcttaacgaatcagaccaaaccgctgagcag
ttagaccctgcaatttctccactgcctcaggatgcaaaaagacattgtacagcagattca
gcttcaaagtcggaaacactacttgagggctcaacccttgattctcagtttttaagaaat
gcagatcaagcaggttcttctcacctagagtgggatactgcttctaaaaccagccaaagc
cattcctgtgaaggaactctccctcaagacctcaataataaaacagaaggccgacacaaa
tcaaagtcttctctttctaaagtacaatcaactcttaaaaaggaaccatcctcaccgtcc
ttccttagtgaattggattgttcccagaagagttcagtggttgatgataactcttttgta
gaggatacagggaaaagcgaggggccggttgatataaccacaaatgggggcaacacttca
cctagaactacaccaagaagttctgatgaggttgagacactagagcgggagacttttgtc
aagagttttgtgtgtaacgtctgcaaagagccatttcggtccatcaaggacctcagtggc
catattatagagcatgcatcagagtggccttttaagtgtgagttctgtgtgcagttattt
ggtaacgcgactgcgctcctcgagcaccgctcctctctccatggggtgggaagaatttat
atttgctctatttgctcaaaggagtttgccttcctctgcaatctccagcaacatcaaagt
gacctacatccaagtcagagttgcactcacactgccgttgaaaacgggaaactcagacct
cagaattacacggatcctgcttacgcaaatgtggagaaagacactgttcttgactcaatt
gctggagctacctctgaaaactctacagaggagcgcaacagtgacactacgaaggtagaa
gaagaggaaaatggcaatgaggaccctacagaagaactatacactacaataaagatcatg
gcatctgaggctggtaaaccgaaaggtccagatgtacggcttggcattaatcaacactac
cccagctataagcctccacctttcccgtaccacaatcgaacgcctgatggctcggttgcc
tccgccactaacttcaccacacacaacatcccccaaacattcagcactgcaatccggtgt
accaaatgtggaaacagctttgacaacatgcctgaactacataagcacatattagtttgt
gctaatgctagtgataagagacgctacacccctaagaagaatcccattcctctaaaacaa
gttgtgaaacagtctccaaatggtcttcttaccaccacaggagcctccgctgccactgct
gctgctgctggacaaaatgctttccgcagaatgggtcaaccaaaaaggctcaattttaac
caagatataacatcgaaagcaaagttgtcagccctaaataagaagaaaaaccagcttgtg
cagaaagccatatctcagaagaataagtcagttgcctctataaagaaaccgacaacccgg
gtaaaagaagaggaaactcataaggcccatgcatgcccatactgtagccgggagttcaca
tacccagccagtctcagtaagcacattgcttgcagctgtccacaaagacctgttgccaag
aagttgaaaaaaggagcactgatgcctcaagacaaaaacaggagtcttcgaagtcgagcc
actgactatgaagtcaaacaggaacctggttctgggccaactgcaaagcccttgggaaaa
accagagcccgtagctctgaaccagtggagagcgaagctccaccagcaaataaaggcaaa
gcacctcaggtacgtacaaagaggctagcctcaaatgcagataccatggctccacaaact
aagaaaggcagaaagagcaacgagccactaacttccataactcctgcacttactgatgac
tcttcgacactaccgccatctaaaatgcaacgatcgaaggaggttgtcatcaagaaggag
cttgtcatcaaaaaagagtctgttgtgaaactgacaccatctaagaaggaggaacgtttt
tcgacaagggcgcgggagagaaaaggtgggccagtcacacgcagtgtacagatggccagt
gcttcagctcctttggaagtgaagtctgaagacctctcaaaccacgaaccaggacagtct
gaggagtctctcttgaagctagccaggtag
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integrated database retrieval system
