Puntigrus tetrazona (Sumatra barb): 122354110
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Entry
122354110 CDS
T08985
Symbol
csf1a
Name
(RefSeq) macrophage colony-stimulating factor 1a
KO
K05453
macrophage colony-stimulating factor 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04010
MAPK signaling pathway
ptet04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122354110 (csf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122354110 (csf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ptet04052
]
122354110 (csf1a)
Cytokines and neuropeptides [BR:
ptet04052
]
Cytokines
CSF and other factors
122354110 (csf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
EC042_2821
Motif
Other DBs
NCBI-GeneID:
122354110
NCBI-ProteinID:
XP_043108066
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All DBs
Position
11:20152822..20165132
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AA seq
532 aa
AA seq
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MNTHITAHKAKVRHLCFFLILGFRLVYAGVPGPCKHSVTQDHLLNLRRLMKNQMQNGCSI
TYTFTERQNLGVVCYVKAAFPHILELLNTQFRYARDSDNYRYTNSLKNLIYNIYSQRCIP
PINEEIEDSPMKFIRTHMTLPRAALEKAEEVIRMYMGLMIQNDKPVDWNCEEEYTEDYPE
STTEPLRQTAGASNCACICPTASNESSKSSASTSHWNIYPKSTLSSQRSSFSPVETSGNE
GTLQFKSAVPVTNRQTLDPGTPATWRSEENLSNFLFGSTPVLHKEPSNSERHHVPSPDLF
PSFTNFQDVFPSRTDSSVETTTSGPNRKSTSDSTQDHVENSTPLLLAKRSLDFKSQTGPS
SSYVKLSQNSVAPTSEPAYREIKSKPSQMLQQSKHIVPVTATVLSSLKTAAYSSEGLSAL
VEEPGHLHSPPENFQTHTQSPVRVPRNFMRTIHEAKLSKDRGSQEMKDQIHPDRENQRNT
ATEQSSSAIISFGTVLLVALGCGGLLLITVLFYRQQKVSDSQLIFALLRRPH
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacataacagcccacaaagccaaggtaaggcatctgtgcttcttccttatc
ctgggctttcgtttggtgtacgctggtgtgccaggtccatgtaagcactctgtcacccag
gaccatctcttaaatttaagacgtctgatgaagaaccagatgcaaaatggttgttcaata
acctacaccttcactgagcgccagaacctgggtgttgtgtgttatgttaaagcagcattc
cctcacatactggagctcctcaacacccagttcagatatgctagggactcggacaattac
cgttatactaattcactgaagaacttgatctacaacatttactcccagagatgcatccct
ccaatcaatgaggagattgaggatagcccaatgaagttcataagaacccacatgacttta
cccagggcagctttggagaaagctgaggaagtgatacgcatgtatatgggtctgatgatt
cagaacgacaagcccgtggactggaactgtgaggaggagtacacagaagattacccagaa
tccaccactgaaccacttaggcaaacagcaggtgcctccaattgcgcctgtatttgtcca
acggcgagcaatgaatcatcaaagtcatctgcatccacaagccattggaatatttacccg
aaatccactctatcctcacaaagatcatccttttcacctgtggaaaccagtggtaatgag
ggaactttacaattcaagtctgctgtcccagtaaccaatcgtcaaacactagatccagga
acacctgccacgtggagatcagaagaaaacttatccaacttcctttttggtagcactcca
gtcttacacaaagaaccttcaaattcagaaaggcaccacgtgccatcaccagatcttttc
ccttcatttacaaattttcaggatgtatttccaagcagaactgactcaagtgttgagaca
accacctctggccccaatcgaaaaagcacaagcgatagcacgcaggaccatgtggagaat
agcacgccgcttttacttgccaagagatctttagatttcaaaagccaaacaggaccatct
agttcctatgtaaaattatcacagaactcagttgctccaacatctgaaccggcatacaga
gagataaaaagcaagccttcccaaatgcttcaacagagtaaacacattgtaccagtcaca
gccacagttctgtcttctttgaaaacagctgcgtattcgtcagaaggtctgagcgccctt
gttgaagagccaggtcatttacacagccctcctgaaaatttccaaacacacacccaaagt
ccagtgagggtgccaaggaatttcatgagaaccatccatgaagcgaagctcagcaaagac
cgaggatcccaggagatgaaggaccagatccacccagacagagaaaatcaaaggaacact
gccacagaacaatccagcagtgcaatcatctcttttggcacggtcctcttagttgcatta
gggtgtggtggacttctgctcataactgtcctgttttacaggcaacaaaaagtaagtgac
tcgcaattaatttttgctctgctgagaagaccccattag
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