Puntigrus tetrazona (Sumatra barb): 122354191
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Entry
122354191 CDS
T08985
Symbol
med16
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122354191 (med16)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
122354191 (med16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT140_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_Prp19
DUF2018
Beta-prop_EML_2
ASA1
DSE1_N
Motif
Other DBs
NCBI-GeneID:
122354191
NCBI-ProteinID:
XP_043108242
LinkDB
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Position
11:14800094..14808365
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AA seq
846 aa
AA seq
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MEIAYVCEWEKRPKSNHCPSIPLVCAWSCRNLIAFTTDLKNEEDDKGLDNAFITNITRPV
DMSHMIHIIDSDHPWDVNSINSGHTEVISCLEWDQSGSRLLSADGDGQIKCWGMTEHLVN
SWECTQSSSLDGEPIVALSWLHNGVKLALHVEKSGSTNFGEKFSRVKFSPSLTLFGGKPM
EGWLAVTVSGLVTVSLLKPNGTLLTASESLCRLRGRVALADIAFTGGGNIVVAATDGSSS
SPVQFYKVCVSVVNEKCRIDTELLPSLFMRCTTDPVRRDKYPAVTHLKFLTRENSEQVLL
CASSQMGSIVECWSLRKEGLPVNNIFQHRSPVVGEKQPMILKWRILSATNDLDRVSAVXL
PKLPISISNTDLKVASDTKFFPGLGLALAFHDGSIQILHRLSLHTMGVFYGSSGSSQRVG
EEPAIKRQRAGGPTLHFKALQFSWTSLALVGVDNHGKLHMIRVSPSMGQMLDMNTLLRHL
LFLLEYCMVTGYDWWDVLLHAQPGMVHNLLEKLHEEYMRQNQALQQVLSTRIVAVKASLC
KLSSATAARACDFHAKLLLIAISSTLKSLLRPHVLNTPDKSPGDRLSEICAKNTDTDIDK
VMINLKTEEFVLDGPPLQSLQQLIQWVGDFVLYLLANLPNQGSIVRPGFGFLRDGASLGM
LREMLVMIRIWGLLKPGCLPIYTATSDNQDSMFLLFRLLTKLWLCSRDESHPQDPDETLI
DECCLLPSQLLVPSMDWLPINDGVITKIQSKHPLRLQFGKPYTLPGVNPNTQVEVFRSPA
SQRMDHLRCLHLGISPTEDSKACTRCGCVTMLRSPNKTNAMRQWEQRWIKNCLCGGLWRR
IPSALT
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgcgtatgtttgcgagtgggagaagagacccaagagcaaccactgcccgtcg
atccctctggtgtgcgcctggtcctgcagaaacctcatcgccttcaccactgacctgaag
aacgaggaggatgacaaaggtctggacaatgccttcattaccaacatcaccagacccgtc
gatatgagtcatatgatacacatcattgacagtgatcacccctgggatgtgaactccatc
aactctggccacactgaagtcatttcctgcctggaatgggaccagtcaggttcgaggctg
ttgtctgccgatggagacggtcagatcaagtgttggggaatgacggagcacctggtgaac
agctgggagtgcacacagagcagctcgttggacggagagccgatcgtagccctgtcatgg
ctgcacaacggagttaaactcgccctgcacgtcgaaaagtctggctccaccaactttgga
gagaagttttcccgggtgaagttctccccctctctgacgctgtttggcgggaagcccatg
gagggctggttggcggtgacggtgagcggcctggtgaccgtgtcgctgctgaagccgaac
gggaccctgctgacggccagcgagagcctgtgcaggctgaggggccgagtggcgctggct
gacatcgccttcaccggcggagggaacatagtggtggcggccaccgacggcagcagctct
tctccggtgcagttctataaagtgtgcgtgagcgtggtgaatgagaagtgccgcatcgac
accgagctcttgccctcgctattcatgcgctgcaccaccgaccccgtccggagggacaaa
taccccgctgtcactcacctcaaattcctcacacgagaaaactcagagcaggtgctgcta
tgtgcgtccagtcagatgggcagcattgtagagtgctggtccttgcggaaggaagggctc
cctgttaataatatctttcaacatcgatcacctgtggttggtgaaaagcagccaatgatt
ctgaagtggcgcatcctctcagcgaccaatgatctggaccgcgtgtctgctgtcngcctg
cctaaactacccatctccatctcgaacactgatctcaaagtcgcctcagataccaagttc
ttcccaggccttggtcttgccctggccttccacgatggcagcatccagatcctccatcgc
ctttccctgcacaccatgggagtgttctacggttcctctggttcctcccagcgcgtcgga
gaagaacctgccattaaacgccagagagctggcgggccgacgctgcactttaaggccctt
cagttctcctggacgtctctggctctggtgggagtggacaatcatggcaagttgcacatg
atccgcgtgtctccatcaatgggccaaatgttggacatgaacacactcctgcggcacctg
ctgttcctcctggagtactgcatggtgacgggatacgactggtgggacgtgctgctgcat
gctcagccaggcatggtgcataaccttctggagaagcttcacgaggagtacatgagacaa
aaccaagctctccagcaggtattgtccacgcgtatagtggcagtaaaggcgtctctgtgt
aaactgtcatctgccaccgcagcgagagcctgtgacttccacgccaaactgctcctcatc
gctatcagctccacgctgaagtctttactgagacctcatgtgctcaacacccccgacaag
agtcctggagaccgtctctctgagatctgtgctaaaaacaccgacactgatattgataag
gtgatgatcaacctgaagacggaggagtttgttctggacggacctcccctccaatccctc
cagcagctcattcagtgggtgggagactttgttctttatctgctggccaacctgcccaac
cagggctccatcgtgcgtccggggtttgggttcctgagggacggtgcgtctttgggtatg
ctcagagagatgctggtgatgatccgtatttggggcctgttaaaaccgggctgtttgccc
atctacacggccacatctgacaaccaggacagcatgtttctgctcttccgcttgctcacc
aaactctggctctgctctcgagatgagagtcacccgcaggaccccgatgagacgttgatt
gacgagtgctgtctgctgcccagtcagctcctggtacccagcatggactggctgcccatc
aacgacggtgttatcactaagatccagagcaaacacccgctcagactgcagttcggcaaa
ccctacaccctgcccggagtcaaccctaacacacaggtggaggtgttcagaagtccagcg
tctcagaggatggaccacctgcgatgtttacatttaggcatctctccaaccgaggacagc
aaagcctgcaccaggtgcggctgcgtcaccatgctgagatccccaaataaaaccaacgcc
atgaggcagtgggagcagcgctggatcaagaactgtctgtgcggaggtctctggagaaga
atcccctccgcgctgacataa
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