Puntigrus tetrazona (Sumatra barb): 122354392
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Entry
122354392 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin type-1 domain-containing protein 7B-like
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
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Gene cluster
GFIT
Motif
Pfam:
TSP1_spondin
TSP1_ADAMTS
TSP_1
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
122354392
NCBI-ProteinID:
XP_043108480
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All DBs
Position
11:complement(10515859..10551041)
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AA seq
1624 aa
AA seq
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LLLWGSLLYVALMSLPLGAEAPKRSQYIWKTDVWGVCVANDCGSVGLQSRSVWCVHSEGW
STHQSNCFPSDRPAHQRVCVKMCEWQKDLFEWRSSPWGPCTPGPLLPANRCVTAQRGVQS
RDVVCVKRTNGTTVSQHMCEAFSAAPEREQACLLPCPIDCVVSAFTHWSTCSRTCGSALQ
QRTRHVLAAPLYGGADCPSLTQTRPCNHEKAHPALCPSDQQEYSYSLWVGPWSPCRLKGT
GPVGKTTVDFGFGLDGKKTIKASYTIKRHAESNYRPNHYDERGHKESWEIIIGYQTRQLR
CMRSDGKNAMLSLCDHDNSPVNFRSCVMPRHCKVSDWSXWSPCSKTCRTSDQSPGFKIRS
RSLERAAIGGGEPCPALKEKANCNVLEDTLPLCPRYEWRVTNWKPCQVTPLLSQQDHRHN
NTSILCGRGIRTREGYCVRIHDNKVSSHMNRPVGRNLCTGPLPLLAESCFIPCQKHCPLT
PWSPWGPCLHDNCLELQGEEGFRVRTRSVIKESWAESDSCPHVSXAMTCDDPVCFKWRVT
SQGPCVPQNGSCGPGFQEQSLECLSATGEPVPNDGCSEDPPPVLQACEMPCPWDCVLGHW
SPWTSCSQSCSSKHQEGKQTRSRLILALPGKSGKPCPPAPELEQWRPCGTHSCTVYYWDT
SPWDPCVPNTITDESEGNSTTPQMENDATCGTGVEIRQVTCRRAGNGHVLPKRCPESSRP
DSTRSCPLPCKTDCVVTPFSEWSACTTSCLSVNATAPTQSRHRIIIQRPANGGQECPDTL
YEERECDPPPLCPTYRWQTHRWHQCILVPDSVRQAVGGPAEACGIGLETREVTCVGADDS
PADMTDCVRWAGLMPVPVRECRVPCRDECSFTSWSRFSQCQGCGSWRTRSRSLIGRSKKR
WRCQQEETFPLLEKEACPCSEYQTKPQGPWSPCLLSPAKNIAGHPFIQGVFHQSQKAVQG
WRAQRKNSECGHGKRFRALACLDHMGRLVEPALCSSPGLEEESCHVACSTDCKLSEWSNW
ADCSASCGGGVKVRSQWLREKPFNGGRPCPKLNYKNQAQVSEVLPCYSDCSQYVWEVKSW
SMCVLNPPNNLTKAVCGEGFRTAKIRCLKMGGENQYEVVDDSLCEQEGQPITVEACLLPC
PAHCVTSEWSQWTKCTVDCNEGDLRWRSRSVLRWPEGDHTCPDLNQTQACINTSCLKYSY
SYSDWSSCQLSENAVCGLGIKTRLLNCVRSDGKLVELSMCKELGPSRGKLSAPCEVGCPV
NCLITEWSTWSGCSHTCGSQSQMTRSRVVLQPAGEGGRPCPSQLSQTRPCPIRPCYSWIL
GDWRPCRVEGADCGEGVSRREISCVVHWGSLSGPPRPVPVEDKMCVGNSQSKVSEVELLQ
PCTIPCPGECHLTKWSPWSSCQLLCLDGRSFETWGRQARSRAVVTQVPENQDTCPSQMYE
ARPCRGGTCLSYEWMTGEWRHNRRLVWCQRSDGVNVTGGCVAQKQPSAVRQCHPPCTKPF
SFCTQNGVCGCEKGFTEVMTSHGFLDYCTRTPGLDHKKADVKTTAGRLRPEQARNKHPIK
DWALQPLGPDGRVKLWVYGLMAAGFVVILLLIIMSFLLCKNPEDSPGSSPQKALALAYDG
DVDM
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
cttctcctgtggggttccctcctttatgtagcactaatgtcccttccactgggggcagag
gcaccaaaaagaagccagtacatctggaaaacagatgtatggggtgtatgtgtggccaat
gattgcggttcggtcgggcttcagagtcgctctgtgtggtgtgtccattctgaaggctgg
agcacgcatcagtccaattgctttccatctgatcgcccagcgcaccagagagtgtgtgtg
aagatgtgcgagtggcaaaaggatctgtttgagtggcgctcgtctccttggggtccctgc
accccgggtcctctcctcccagccaatcgatgtgtgaccgctcagcgtggagtacagagc
cgagatgtggtgtgtgtgaagcgtaccaacggcaccacggtgagccagcatatgtgtgaa
gcgttttcagcagcgccggagcgagaacaggcgtgtttgttaccctgcccgatcgactgc
gtcgtctccgccttcacccactggtccacctgcagtcgtacctgcgggtcggccctccag
cagcgcaccagacacgtgctcgcggcgcctctgtatggaggagcagactgtcccagcctc
acccagacgcgtccctgtaaccacgagaaagcccaccctgccctttgtccctccgaccaa
caggaatacagttacagtttgtgggtggggccctggagcccttgcagacttaaagggaca
gggcctgttggaaagaccacagtggactttggtttcgggcttgatgggaaaaaaacaatc
aaagcttcgtacaccatcaaacgccacgctgagagtaattaccgtccaaatcattatgat
gaaagaggccataaagaatcctgggaaattatcattggctatcagactaggcaactgcgc
tgtatgaggagcgatgggaagaacgccatgctaagcctttgcgaccacgataacagcccg
gtgaactttcgctcatgcgtgatgcccagacactgcaaagtgtctgattggtcancgtgg
agtccgtgttcaaagacatgtcggacgtctgatcaatcgcctggcttcaaaatcaggagc
cgcagcctggaaagagcagccattggtggaggagagccatgccccgccctgaaggaaaaa
gctaactgtaatgttttggaagacactctgccactgtgcccaaggtatgagtggagggtg
accaactggaaaccatgccaggtgaccccactgttgagtcagcaggaccatcgccataac
aacaccagcatcctgtgtggacgtggcatccggacccgagagggatattgtgtcagaatc
catgacaacaaagtatcatcccatatgaatcggcctgttggcagaaacttgtgcaccggg
cctttaccgctattggctgagtcttgcttcattccctgtcagaaacattgtcccctcaca
ccttggtcaccctggggaccctgtctccatgacaactgtttggaacttcaaggagaagaa
ggtttcagggtgagaactcgttctgtaattaaggagtcatgggcggaatccgacagttgc
cctcacgtcagcnnggcgatgacctgcgatgaccccgtctgcttcaagtggagagtgacg
tcacagggaccctgtgttcctcaaaatgggtcgtgtggcccaggattccaagaacagagt
ctggagtgtttgtctgccacaggtgagccggtccctaatgacgggtgttcagaagatcct
cctccggtcctgcaggcatgtgagatgccctgtccttgggactgtgtcctgggacactgg
agcccctggacttcctgttcccagtcctgctccagtaagcaccaagagggaaaacaaact
cgctcgcgtcttattctggctcttcctggaaagtctggaaagccatgtcctccggcccct
gagctggagcaatggagaccctgtggcacacactcatgcacagtatactattgggatact
tcaccttgggatccctgtgtgccaaacaccatcacagacgagagcgaaggtaacagcaca
actccacagatggagaatgatgccacctgcggaacaggagtagagattcgccaagtcacg
tgcaggagagccgggaacggacatgttctgccaaaacggtgtccagaatcctcccgtcct
gactcgacacggtcttgtcctttaccttgcaaaactgactgcgttgtcacaccttttagt
gaatggagcgcctgtaccacttcctgtttatcagtaaatgctaccgcaccaacccagtcc
cgtcacaggatcataatccagagacctgctaatggaggtcaagagtgccccgatactctt
tatgaggagagagaatgcgatccacctcctctctgcccaacgtacagatggcagacccac
cgctggcatcagtgcattctggtacctgattcggtgaggcaggctgtgggtgggcccgca
gaggcatgtggtattggcctagagacaagagaggtaacgtgtgttggtgcggacgattct
ccagcagatatgacagactgtgtgaggtgggctgggctgatgcccgtcccggtgagggaa
tgtcgtgtgccttgcagggatgaatgtagcttcacgtcctggagcagattcagccagtgt
caaggctgtggaagttggcgcactcgttcccgatctctgataggtcggagtaagaagcgc
tggagatgccaacaggaggagacgtttcctctgctggagaaagaagcctgtccttgttct
gaatatcaaaccaaacctcagggtccctggtctccttgtttgctctcaccagcaaagaac
attgctggccatcctttcatccaaggagttttccaccaaagccaaaaggcagtccagggc
tggcgagctcagaggaagaacagcgagtgtgggcatggaaagcgtttcagagctcttgcc
tgtctggatcacatgggacgattggtggagccagccctctgcagcagccctggattagaa
gaggaatcgtgtcatgtagcctgttctacagactgtaagctgagcgagtggtcgaactgg
gccgactgcagcgcctcttgtggtggaggcgtaaaggttcgctctcagtggctgcgagag
aagcctttcaatggaggtcgaccgtgcccaaaactcaattacaaaaatcaggctcaggtg
tctgaggtactgccctgttactctgactgcagtcagtacgtatgggaagtgaagtcctgg
tccatgtgtgtcctaaacccaccaaacaatctcacgaaggctgtatgtggagagggcttc
cggacggccaaaatccgctgcttgaaaatgggaggagaaaaccagtatgaggtcgtggac
gactcgctgtgcgagcaagagggacagccaatcacagtcgaggcctgcctgctgccgtgc
cccgcccactgcgtgacatcagagtggagtcagtggaccaagtgtaccgtggactgtaat
gagggtgatttgaggtggaggagtagaagtgtcttgaggtggccagaaggagatcatacc
tgccctgatctaaaccaaactcaagcctgtatcaacacgagctgtctcaaatactcctac
tcctactcagactggagcagctgtcagctcagtgaaaacgcagtatgcggccttgggatt
aagaccagactcctgaactgtgtccgcagcgacgggaagctggtggaactgagcatgtgc
aaagagttgggtccttcacgtggaaagctctctgccccctgcgaggtcggctgccctgtt
aattgcctgatcacagagtggtccacctggtcaggatgttcacacacctgtggaagccaa
agtcaaatgacacgatccagggtagttttgcagcccgcgggtgaaggaggtcgtccctgt
ccgtctcagctgtcccagactcgcccctgtcccatcaggccgtgctacagctggatactg
ggggactggagaccgtgcagggtggagggggctgactgtggcgagggagtaagtcggagg
gaaatatcctgtgtagtgcactggggttctctttcaggtcctcctcggcccgttccagta
gaggataaaatgtgtgtgggaaattcacagagcaaagtcagcgaggtggagttactgcag
ccctgcacaatcccatgtccaggagaatgtcacctgaccaaatggtcaccgtggagttcg
tgtcagctgctgtgtttggatgggaggagttttgagacttggggtcgacaggctcgttct
agagccgtagtcactcaggtcccggagaaccaggacacctgtcccagccagatgtacgag
gcacggccgtgccgaggaggaacatgtcttagttatgaatggatgactggtgaatggagg
cataaccgtagactggtgtggtgccagcgctctgatggagtcaacgtcacaggaggctgc
gttgctcagaagcagccctctgccgtacgacagtgtcaccctccctgcaccaaacccttc
tccttctgcacacagaatggagtctgcggttgtgagaagggcttcacggaggtcatgacc
tcccacgggttccttgactactgcaccagaaccccggggctggaccataagaaggcagat
gtgaagaccaccgcaggccgtcttcgaccagagcaagcccggaacaagcaccccattaag
gactgggcgctacagcctctcggaccagacggccgtgtcaagttatgggtgtatgggctg
atggcggccgggtttgtcgtgatcctcctcctcatcatcatgtccttcctcctgtgtaaa
aacccggaggacagtcccggcagcagtccgcagaaggcgctggctctagcgtacgacggg
gacgtggacatgtga
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